Gvermi12343.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12343.t1
Unique NameGvermi12343.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length487
Homology
BLAST of Gvermi12343.t1 vs. uniprot
Match: A0A2V3J445_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J445_9FLOR)

HSP 1 Score: 336 bits (861), Expect = 8.730e-108
Identity = 211/434 (48.62%), Postives = 261/434 (60.14%), Query Frame = 0
Query:   78 MATLLPAVPTPWLGKHTPAQLRELYAAALRRELSVFDLPDTAPTLDAVVDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFHDAQLALMTEALDSMSGLNVFQTLVKARVADVPKAFDATKTWGKFP-----DVGTPAT--LWSMAAGLACDTEGHDDGLEDEHEIESLEFSTLERSPCERKGRKVVAQLARAQISHDFPRVSAESFVTELQRGFAEDGIFRYAKLQLVARYQELDDLVMPPLERVDSPGPRLVPSPKPSPPP-------------VTEEGGSLCPPGGLVTSTLTVLPVHTNHAPAGGSSIARATRPR---RCNTSRFADLFALRPSRVTAAHTESYN--PSGIWSTSHFMDFCPIRSW 486
            MA L+ AVPTP L   TPA L  LY AALRR  S FDL + + TLDAVV HV+ NT VSRSA+V AC+Y+DRLT AAPH+FVT +NVQRLF VAFMLAAKWHED  +SS  FA LFGMSL  L  LES F   ID++LFVTTEQFHDAQ+ALM  ALDS  GL V+  LV  RVAD   AFD   TW + P      V  P    +W+MAA L    + H           +   ST+  S    +GR+VVA LARAQ+ HDFP+V  + +V+ELQR F +DGIFRYAKLQL+ + +ELDDLV+PPLER+  P P LV  P P+ PP             + E G  +   G  + +  + L V  +        +  A+ P     C  +R +D+ +   +R  +   E     P+ IWST  F+DFCPIRSW
Sbjct:    1 MAALVFAVPTPLLHTFTPAHLSTLYTAALRRTRSPFDLLNPSATLDAVVHHVVHNTTVSRSALVTACVYIDRLTQAAPHMFVTTTNVQRLFAVAFMLAAKWHEDAYFSSAYFAALFGMSLPELTTLESTFIHTIDYHLFVTTEQFHDAQVALMARALDSPQGLTVYHALVHHRVADSHNAFDLANTWRQVPLHSAVSVAQPPAHHVWAMAANLVRHRQ-HPLPQPPHRARPTQPQSTVPTSTALCEGRRVVAALARAQLQHDFPQVCEQLYVSELQRRFTDDGIFRYAKLQLIGQSEELDDLVLPPLERL--PEPPLVELPSPARPPXXXXXXCDRRGNALEERGHGVRGFGAFLVNAASCLTVSESTQLECEPFVGWASWPDLAVTCYAARGSDVESPCATRGFSDCVEPLLSVPTNIWSTPKFVDFCPIRSW 431          
BLAST of Gvermi12343.t1 vs. uniprot
Match: A0A2V3J580_9FLOR (Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J580_9FLOR)

HSP 1 Score: 269 bits (688), Expect = 1.620e-81
Identity = 156/355 (43.94%), Postives = 219/355 (61.69%), Query Frame = 0
Query:   36 PLANCTGAMVMVVKAAMNSRAEKGQYWLHRASASASGTDSFDMATLLPAVPTPWLGKHTPAQLRELYAAALRRELSVFDLPDTAPTLDAVVDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFHDAQLALMTEALDSMSGLNVFQTLVKARVADVPKAFDATKTWGKF----PDVGTPATLWS---MAAGLACDTEGHDDGLEDEHEIESLEFSTLERSPCERKGRKVVAQLARAQISHDFPRVSAESFVTELQRGFAEDGIFRYAKLQLVARYQELDDLVMPPLERVDSP 383
            PL NC  A++MV+  A+++RAEKG+ WL+ A AS      FD+A ++P VP P L   T +Q+  +Y AAL    S FDL   + TL+ VV H++ +T VSRSA+V+A +Y+DRLT A PH+FVT +N+QRLF VAF+LAAKW ED  + S  FAD FGM    + +LE  F A+I + LFV+TEQFHDAQ+ALM EALDS SGL+VF +L+   +A V KA     +W +     P     A LW      AG   +T G +  L+D    +++  + +       +G++VV +LAR Q++HDF       F    QR F E G+ RYAKL  +AR + +++L++PPLE  + P
Sbjct:   65 PLINCLPALLMVLNTALHNRAEKGEQWLNAACASRG---PFDLALVVPLVPKPMLSGLTVSQIGHMYRAALGVSRSPFDLLSGSATLNGVVHHIVRHTNVSRSALVIAAVYIDRLTAAVPHMFVTRTNIQRLFAVAFVLAAKWLEDIFFPSNCFADFFGMHPVEMGQLERWFAASIGYRLFVSTEQFHDAQVALMAEALDSDSGLHVFHSLLHHNIAFVQKALHMAPSWKELAVQPPAPCDNAMLWGSIWQTAGRLVETPGEESALDDAPG-DAVGCNCVRTERRMVRGQEVVQELARVQLAHDFSVTPEGLFARHWQRYFTEIGLVRYAKLDRIARDEWVENLILPPLEHPEEP 415          
BLAST of Gvermi12343.t1 vs. uniprot
Match: A0A6A7G3I6_9CRUS (Cyclin-dependent protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G3I6_9CRUS)

HSP 1 Score: 69.7 bits (169), Expect = 2.840e-10
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  120 PTLDAVVDH---VLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFHDAQLAL 229
            P   AV D+   +   +  S    VL+ IY+DR+    P   V   NV RL   + MLAAK+ +D+ Y++  +  + G+  Q +N LE  F   I+FNLFV+T+Q+   QL L
Sbjct:   49 PPAIAVADYLERIAKYSACSSECFVLSLIYIDRIIQDNPFFLVNSLNVHRLLITSVMLAAKFFDDHYYNNAYYGKVGGVPCQEINSLEIEFLFMINFNLFVSTDQYDQYQLQL 161          
BLAST of Gvermi12343.t1 vs. uniprot
Match: A0A0D9QJJ1_PLAFR (Uncharacterized protein n=5 Tax=Plasmodium TaxID=5820 RepID=A0A0D9QJJ1_PLAFR)

HSP 1 Score: 64.7 bits (156), Expect = 4.250e-8
Identity = 34/98 (34.69%), Postives = 58/98 (59.18%), Query Frame = 0
Query:  126 VDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFH 223
            V+ +   TG S    VL  IY+DR+      + ++   + RL   A M+AAK+ +D  YS+  +A + G+S + +N+LE  F   ID+NLFV++E+++
Sbjct:   55 VERIGKYTGCSNECFVLLMIYLDRIVKINSDITLSLLCIHRLLITAIMIAAKFFDDLYYSNAFYAKVGGVSTEEINKLEGTFLHLIDYNLFVSSEEYN 152          
BLAST of Gvermi12343.t1 vs. uniprot
Match: A5K9H4_PLAVS (Cyclin2 related protein, putative n=8 Tax=Plasmodium vivax TaxID=5855 RepID=A5K9H4_PLAVS)

HSP 1 Score: 63.9 bits (154), Expect = 7.130e-8
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 0
Query:  126 VDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQF 222
            V+ +   TG S    VL  IY+DR+      + ++   + RL   A M+AAK+ +D  YS+  +A + G+S + +N+LE  F   ID+NLFV++E++
Sbjct:   55 VERIGKYTGCSNECFVLLIIYLDRIVKVNEDISLSLLCIHRLLITATMIAAKFFDDLYYSNAFYAKVGGVSTEEINKLEGTFLHLIDYNLFVSSEEY 151          
BLAST of Gvermi12343.t1 vs. uniprot
Match: W7AS48_9APIC (Uncharacterized protein n=1 Tax=Plasmodium inui San Antonio 1 TaxID=1237626 RepID=W7AS48_9APIC)

HSP 1 Score: 63.5 bits (153), Expect = 1.120e-7
Identity = 35/109 (32.11%), Postives = 64/109 (58.72%), Query Frame = 0
Query:  115 LPDTAPTLDAVVDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFH 223
            +PD +  + + ++ +   TG S    VL  IY+DR+      + ++   + RL   A M+AAK+ +D  YS+  +A + G+S + +N+LE  F   ID+NLFV++E+++
Sbjct:   46 VPDIS--IKSYMERIGKYTGCSNECFVLLIIYLDRIVKTNTDITLSLLCIHRLLITATMIAAKFFDDLYYSNAFYAKVGGVSTEEINKLEGTFLHLIDYNLFVSSEEYN 152          
BLAST of Gvermi12343.t1 vs. uniprot
Match: K6UKJ6_PLACD (Cyclin2 related protein (Fragment) n=1 Tax=Plasmodium cynomolgi (strain B) TaxID=1120755 RepID=K6UKJ6_PLACD)

HSP 1 Score: 63.2 bits (152), Expect = 1.550e-7
Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 0
Query:  133 TGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFH 223
            TG S    VL  IY+DR+      + ++   + RL   A M+AAK+ +D  YS+  +A + G+S + +N+LE  F   ID+NLFV++E+++
Sbjct:   62 TGCSNECFVLLIIYLDRIVKINTDITLSLLCIHRLLITAIMIAAKFFDDLYYSNAFYAKVGGVSTEEINKLEGIFLHLIDYNLFVSSEEYN 152          
BLAST of Gvermi12343.t1 vs. uniprot
Match: A0A0N1PBW7_LEPSE (Cyclin 11 putative (CYC11) n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1PBW7_LEPSE)

HSP 1 Score: 64.3 bits (155), Expect = 3.600e-7
Identity = 33/112 (29.46%), Postives = 67/112 (59.82%), Query Frame = 0
Query:  112 VFDLPDTAPTLDAVVDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFH 223
            +F       T  A+++   + T +S S ++ A IY+DRL +  P L +T  N+++L   A  +A+K  +  + ++  FA++F + +Q +N+LES F   +DF+ F+++++F+
Sbjct:  596 IFQSERATGTYVALLNRFAEYTYISPSTLLSAMIYLDRLCLLHPRLLLTSRNIEKLLVAAVRVASKVVDLRSVNNKNFANVFSIMIQDMNDLESEFLKLMDFDFFLSSKEFN 707          
BLAST of Gvermi12343.t1 vs. uniprot
Match: A0A7S0QHA8_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHA8_9CRYP)

HSP 1 Score: 62.0 bits (149), Expect = 7.920e-7
Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 0
Query:  106 LRRELSVFDLPDTAPTLDAVVDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQF 222
            L  +LS F  P         V  +L  +G      + A IY+DR  +  P+L +T   +QRL  VA M A K+ ED    + ++A++ G+ L+ LN+LE  F  A+DF+L V  + +
Sbjct:   96 LPEKLSAFLGPRMGFNCSYYVKRILKYSGADPCCAIAALIYLDRFQLRHPNLPLTSKTLQRLLLVALMTATKYLEDQTCLNSRWAEIGGIPLRELNQLELEFLFALDFDLAVHPQHY 212          
BLAST of Gvermi12343.t1 vs. uniprot
Match: A0A836ITX4_9TRYP (Uncharacterized protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836ITX4_9TRYP)

HSP 1 Score: 60.8 bits (146), Expect = 4.300e-6
Identity = 31/101 (30.69%), Postives = 62/101 (61.39%), Query Frame = 0
Query:  124 AVVDHVLDNTGVSRSAIVLACIYVDRLTVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLLNELESAFTAAIDFNLFVTTEQFHD 224
            A++    + T +S S ++ A IY+DRL +  P L +T  N+++L   A  +++K  +  + ++  FA +F +S+Q +NELES F   ++F+ F++ ++F +
Sbjct:  622 ALLTRFAEYTYISASTLLSAVIYLDRLCLRHPRLLLTARNIEKLLVAAVRVSSKVLDLRSVNNKNFASVFSVSVQDMNELESEFLRLMNFDFFLSPKEFEN 722          
The following BLAST results are available for this feature:
BLAST of Gvermi12343.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3J445_9FLOR8.730e-10848.62Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A2V3J580_9FLOR1.620e-8143.94Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A6A7G3I6_9CRUS2.840e-1036.28Cyclin-dependent protein (Fragment) n=1 Tax=Hirond... [more]
A0A0D9QJJ1_PLAFR4.250e-834.69Uncharacterized protein n=5 Tax=Plasmodium TaxID=5... [more]
A5K9H4_PLAVS7.130e-835.05Cyclin2 related protein, putative n=8 Tax=Plasmodi... [more]
W7AS48_9APIC1.120e-732.11Uncharacterized protein n=1 Tax=Plasmodium inui Sa... [more]
K6UKJ6_PLACD1.550e-736.26Cyclin2 related protein (Fragment) n=1 Tax=Plasmod... [more]
A0A0N1PBW7_LEPSE3.600e-729.46Cyclin 11 putative (CYC11) n=1 Tax=Leptomonas seym... [more]
A0A7S0QHA8_9CRYP7.920e-733.33Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A836ITX4_9TRYP4.300e-630.69Uncharacterized protein n=1 Tax=Porcisia hertigi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 110..258
e-value: 2.5E-25
score: 91.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..403
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 140..215
e-value: 2.4E-11
score: 44.2
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 108..302
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 129..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4290751..4292211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12343.t1Gvermi12343.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4290751..4292211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12343.t1 ID=Gvermi12343.t1|Name=Gvermi12343.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=487bp
MANVHHLRNNTNGAQNVTLPPTAPTIIPGRGMPRYPLANCTGAMVMVVKA
AMNSRAEKGQYWLHRASASASGTDSFDMATLLPAVPTPWLGKHTPAQLRE
LYAAALRRELSVFDLPDTAPTLDAVVDHVLDNTGVSRSAIVLACIYVDRL
TVAAPHLFVTESNVQRLFGVAFMLAAKWHEDYNYSSVQFADLFGMSLQLL
NELESAFTAAIDFNLFVTTEQFHDAQLALMTEALDSMSGLNVFQTLVKAR
VADVPKAFDATKTWGKFPDVGTPATLWSMAAGLACDTEGHDDGLEDEHEI
ESLEFSTLERSPCERKGRKVVAQLARAQISHDFPRVSAESFVTELQRGFA
EDGIFRYAKLQLVARYQELDDLVMPPLERVDSPGPRLVPSPKPSPPPVTE
EGGSLCPPGGLVTSTLTVLPVHTNHAPAGGSSIARATRPRRCNTSRFADL
FALRPSRVTAAHTESYNPSGIWSTSHFMDFCPIRSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf