Gvermi12189.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12189.t1
Unique NameGvermi12189.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length233
Homology
BLAST of Gvermi12189.t1 vs. uniprot
Match: A0A2V3IY45_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY45_9FLOR)

HSP 1 Score: 286 bits (733), Expect = 3.080e-94
Identity = 124/194 (63.92%), Postives = 152/194 (78.35%), Query Frame = 0
Query:   38 LARDDPYKCIWHGRGNHLVIDMKYIPPRGSWTRNGYGLEWKKDKPSGTDRPGSGQMCFSFRVPKSGNYYFTGITSAPHPTDHNDMWVKLSSGIRLYRGKTHAFRYTTKKYIKAYQNEGKDEVNNILSSVDHNPHYFVSENMPKNETHTVCISGRSSKFTVYKLVFVRCWLGNGSCNRWDTWIKRSVKYLIESIC 231
            +   DPY+C+WHGR   LV+D+K+    G WT+NG GLEWK+    G D PGSG+MCF F VP+ G YYFT +TSAPHPTDHNDMWV++ +GIRLYRGKTH +  T +KYIKAYQN G++ +N+ILSSVDHNPHYFVSE + +NETHTVCISGRSS+FTVYKLVFV+C   NGSCNRW  +I+  +  L+E IC
Sbjct:  100 MPHKDPYRCVWHGRDKELVLDLKFFTAWGGWTQNGDGLEWKRYLSKGIDEPGSGEMCFKFAVPEDGFYYFTALTSAPHPTDHNDMWVRIQTGIRLYRGKTHVYWMTVRKYIKAYQNLGENRINDILSSVDHNPHYFVSEKLMQNETHTVCISGRSSRFTVYKLVFVKCSPTNGSCNRWGRYIREKMNSLVEPIC 293          
BLAST of Gvermi12189.t1 vs. uniprot
Match: R7QCY0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCY0_CHOCR)

HSP 1 Score: 142 bits (359), Expect = 1.070e-37
Identity = 72/188 (38.30%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   46 CIWHGR-GNHLVIDMKYIPPRGSWTRNGYGLEWKKDKPSGT-DRPGSGQMCFSFRVPKSGNYYFTGITSAPHPTDHNDMWVKLSSGIRLYRGKTHAFRYTTKKYIKAYQNEGKDEVNNILSSVDHNPHYFVSENMPKNETHTVCISGRSSKFTVYKLVFVRCWLGNGSCNRWDTWIKRSVKYLIESIC 231
            C + G  GN +VI    +     WT+    + ++K  P G+ D  GSG MC     P  G YYFT +T APHPT+HNDMWV++SSG  L      AF+     + K YQN G  ++ + L ++D++ H F ++N+     +++CISGRS+KF VYKLV ++C     +CNR   +I+  +  L  S C
Sbjct:  126 CAYRGTSGNKIVIPSTGLSAGNGWTKEAGAIIYRKGDPQGSVDAEGSGTMCVKVMFPSPGKYYFTALTKAPHPTEHNDMWVRISSGFDLVHTSKGAFKSGGSSWYKGYQNRGGMQMADYLLTIDNDGHQFQTKNVAAGPAYSLCISGRSTKFWVYKLVLIKC--DGDNCNRNSPFIRSKMNGLPNSPC 311          
BLAST of Gvermi12189.t1 vs. uniprot
Match: A0A1X6PGN3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGN3_PORUM)

HSP 1 Score: 93.2 bits (230), Expect = 3.560e-18
Identity = 59/157 (37.58%), Postives = 83/157 (52.87%), Query Frame = 0
Query:   75 LEWKKDKPS-GTDRPGS-GQMCFSFRVPKSGNYYFTGITSAPHPTDHNDMWVKLSSGIRLYRGKTHAFRYTTKKYIKAYQNEGKDEVNNILSSVDHNPHYFVSENMPKNETHTVCISGRSSKFTVYKLVFVRCWLGNGSCNRWDTWIKRSVKYLIES 229
            L +K +K S G D  G  G   + F+V ++G Y      +APHPTDHND+W+KL +G R Y+G T      T  + K YQN GK+E      +VD + HY ++  +   ET T  ISGRSSKF V  +  + C     +C    T+   +VK  + S
Sbjct:  511 LVFKPEKQSTGIDGAGRVGVKEYKFKVEEAGAYRVMMRLNAPHPTDHNDLWMKLGAGARKYQGTT--ISSLTSSWFKVYQNRGKNEWMLGGVTVDFDGHYLLTRPLTAGETFTFSISGRSSKFAVADIYLLVCDPSKSACGGGWTYFNTAVKMGVSS 665          
BLAST of Gvermi12189.t1 vs. uniprot
Match: A0A1X6NQL4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQL4_PORUM)

HSP 1 Score: 72.0 bits (175), Expect = 1.680e-11
Identity = 47/141 (33.33%), Postives = 67/141 (47.52%), Query Frame = 0
Query:   75 LEWKKD--KPSGTDRPGSGQMCFSFRVPKSGNYYFTGITSAPHPTDHNDMWVKLSSGI-RLYRGKTHAFRYTTKKYIKAYQNEGKDEVNNILSSVDHNPHYFVSENMPKNETHTVCISGRSSKFTVYKLVFVRCWLGNGSC 212
            L WK D    +  D PG+G   ++FR   +G Y      SAPHPTD ND+WV+L  G  R+  G        T  + K YQN G         +VD + HY ++  +      T+ +SGRSS+  V  ++ V C +    C
Sbjct:   93 LTWKPDVDDAASLDAPGTGTREWTFRADVAGTYRVVLGLSAPHPTDFNDVWVRLGDGAARVKVGSGRVAIPETAGWFKVYQNAGGGRWVFGGVTVDFDGHYPLTRRLAAGAEFTIGLSGRSSRLAVADVMLVACDVAGTDC 233          
BLAST of Gvermi12189.t1 vs. uniprot
Match: A0A2V3IJ01_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ01_9FLOR)

HSP 1 Score: 61.2 bits (147), Expect = 7.400e-8
Identity = 41/150 (27.33%), Postives = 72/150 (48.00%), Query Frame = 0
Query:   95 FSFRVPKSGNYYFTGITSAPHPTDHNDMWVKL-SSGIRLYR-GKTHAFRYTTKK------------YIKAYQNEGKDEVNNILSSVDHNPHYFVSENMPKNET-HTVCISGRSSKFTVYKLVFVRCWLGNGSCNRWDTWIKRSVKYLIES 229
            + F V  +G Y     ++APHPT+HND+W+ +  SG  + R G+     +   +            + K YQN+G +  N    +VDHN H  ++  +  + + ++V I+GRS++F V +++   C      C+ W    K +     ES
Sbjct:   53 YFFTVNTTGKYRIVLKSAAPHPTEHNDLWMAVPESGAIMRRFGRDVDLTWPASRNERGELMLDGQNWFKVYQNQGGNTWNYGGKTVDHNGHVIITRELKADHSWYSVRIAGRSTQFAVDRIILYLC--DGAQCDDWSEEFKTATVRATES 200          
The following BLAST results are available for this feature:
BLAST of Gvermi12189.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IY45_9FLOR3.080e-9463.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCY0_CHOCR1.070e-3738.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PGN3_PORUM3.560e-1837.58Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NQL4_PORUM1.680e-1133.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IJ01_9FLOR7.400e-827.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3787278..3791371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12189.t1Gvermi12189.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3787278..3791371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12189.t1 ID=Gvermi12189.t1|Name=Gvermi12189.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=233bp
MNIEVVNLHGTIKSEARKPKEKDVEHILFNYIATQFSLARDDPYKCIWHG
RGNHLVIDMKYIPPRGSWTRNGYGLEWKKDKPSGTDRPGSGQMCFSFRVP
KSGNYYFTGITSAPHPTDHNDMWVKLSSGIRLYRGKTHAFRYTTKKYIKA
YQNEGKDEVNNILSSVDHNPHYFVSENMPKNETHTVCISGRSSKFTVYKL
VFVRCWLGNGSCNRWDTWIKRSVKYLIESICN*
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