Gvermi12372.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12372.t1
Unique NameGvermi12372.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length114
Homology
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A2V3IK71_9FLOR (Thiosulfate sulfurtransferase 16, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK71_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 2.310e-49
Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 0
Query:    5 LSPHAANEKLSQSSAIYVDVRTPAEFAAGHIPRALNVSFTTPDMKPLPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVEK 113
            LSP   +++++ SSAIYVDVRTP EFA GHIP A+NV  TTPDMKPLPSFVDDFRAAVGDA++IIVGCKSGKRS+ AI +L+ AG + L+ELEGGF+SW  DS LPV K
Sbjct:   19 LSPREVHDRMTNSSAIYVDVRTPTEFAEGHIPDAINVPLTTPDMKPLPSFVDDFRAAVGDASDIIVGCKSGKRSSNAITQLHQAGFKQLLELEGGFSSWLEDSNLPVAK 127          
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A2J7ZSM1_9CHLO (Thiosulfate sulfurtransferase 16, chloroplastic n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZSM1_9CHLO)

HSP 1 Score: 81.6 bits (200), Expect = 1.680e-17
Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    7 PHAANEKLSQSSAIYVDVRTPAEFAAGHIPRALNVSFTTPDMKPLPSFVDDFRAAVGDATE-IIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVE 112
            P  A E +      Y+DVRTPAEF+AGH P A+NV    PD      FV   + A  D  E ++VGCK+G+RS  AI  L+ AG   L+ L GGF+ W +   LP+E
Sbjct:   39 PAEAQELIKAEGYKYLDVRTPAEFSAGHAPAAVNVDVFDPD------FVAGVQRAFPDKAESLLVGCKAGRRSLTAIGLLSQAGYTDLVNLTGGFDLWAAQG-LPLE 138          
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A0D2SS11_GOSRA (Rhodanese domain-containing protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A0D2SS11_GOSRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.160e-17
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 0
Query:    7 PHAANEKLSQSSAIYVDVRTPAEFAAGHIPRALNVSF---TTPDMKPLPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVE 112
            P     +L Q+   Y+DVRTP EF+AGH+P A+N+ +     P M   PSFV +  + +G   EIIVGC+ GKRS  A  +L  AG   + ++ GG+ +W  +  LP E
Sbjct:  145 PVRVAHELHQAGHRYLDVRTPEEFSAGHVPGAINIPYMYKVGPGMAKNPSFVAEVSSHLGKYDEIIVGCQLGKRSLMAATELLAAGFTAVTDIAGGYAAWTQNG-LPTE 252          
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A5J5NVF9_GOSBA (Rhodanese domain-containing protein n=6 Tax=Gossypium TaxID=3633 RepID=A0A5J5NVF9_GOSBA)

HSP 1 Score: 82.8 bits (203), Expect = 6.870e-17
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 0
Query:    7 PHAANEKLSQSSAIYVDVRTPAEFAAGHIPRALNVSF---TTPDMKPLPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVE 112
            P     +L Q+   Y+DVRTP EF+AGH+P A+N+ +     P M   PSFV +  + +G   EIIVGC+ GKRS  A  +L  AG   + ++ GG+ +W  +  LP E
Sbjct:  152 PVRVAHELHQAGHRYLDVRTPEEFSAGHVPGAINIPYMYKVGPGMAKNPSFVAEVSSHLGKYDEIIVGCQLGKRSLMAATELLAAGFTAVTDIAGGYAAWTQNG-LPTE 259          
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A250XDV9_9CHLO (Rhodanese domain-containing protein n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDV9_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 1.070e-16
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    1 MVTKLSPHAANEKLSQSSAIYVDVRTPAEFAAGHIPRALNVSF---TTPDMKPLPSFVDDFRAAVGDATE-IIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVEK 113
            M   +SP  A E L +S   Y+DVRT  EF  GH P+ALN+     T   M P   F  +    V +  E I+VGCKSG RS AAI  L+  G   L  L GG+++W ++  LPVEK
Sbjct:   15 MYKDVSPVQAYELL-KSGVRYLDVRTVEEFLGGHAPKALNIPVKLKTDTGMAPNVRFQAEVSELVPNKAETIVVGCKSGARSVAAIHLLSQEGYGDLQNLVGGWDAWSANPNLPVEK 130          
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A3M1E5Q4_9BACT (Rhodanese-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1E5Q4_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 1.250e-16
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    2 VTKLSPHAANEKLSQSSA-IYVDVRTPAEFAAGHIPRALNV-----SFTTPDMKPLPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGF 100
            V +++P  A   L    A  Y+DVRT AEFAAGH+P A+N+     +  T  M+P PSF    RA +    +IIVGC+SG RS AA   L + G + ++ L GGF
Sbjct:    3 VPEVAPEEAKRLLDAGEASCYLDVRTEAEFAAGHVPGAINIPVARINAATGRMEPDPSFAHKVRAKLSKGAKIIVGCRSGPRSEAACHILREHGYEHVVNLRGGF 107          
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A803MAU7_CHEQI (Rhodanese domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MAU7_CHEQI)

HSP 1 Score: 79.7 bits (195), Expect = 3.210e-16
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   21 YVDVRTPAEFAAGHIPRALNVSFTT---PDMKPLPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVE 112
            Y+DVRTP EF AGH+P A+N+ +       M   P+F++   +      EI+VGC+SGKRS  A   L  AG  G++++ GG+++W + S LP E
Sbjct:   95 YLDVRTPEEFTAGHVPGAVNIPYMLRIGSGMTKNPNFLEQVLSQFSKDDEILVGCQSGKRSLMAANDLQSAGYTGIIDIAGGYSAW-TQSELPTE 188          
BLAST of Gvermi12372.t1 vs. uniprot
Match: UPI001262F482 (thiosulfate sulfurtransferase 16, chloroplastic-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262F482)

HSP 1 Score: 78.2 bits (191), Expect = 9.850e-16
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 0
Query:    7 PHAANEKLSQSSAIYVDVRTPAEFAAGHIPRALNVSF---TTPDMKPLPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVE 112
            P     +L Q+   Y+DVRTP EF+AGH+P A+NV +       M   P F+ +  A  G   EI+VGC+ GKRS  A   L  AG  G+ ++ GG+ +W     LP E
Sbjct:   73 PVRVAHELLQAGHRYLDVRTPEEFSAGHVPGAVNVPYMYRVGSGMTKNPEFLKEVSAYFGKYDEILVGCELGKRSLMAATDLLAAGFTGITDMAGGYAAWRQTG-LPTE 180          
BLAST of Gvermi12372.t1 vs. uniprot
Match: D8REU8_SELML (Rhodanese domain-containing protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8REU8_SELML)

HSP 1 Score: 75.1 bits (183), Expect = 3.010e-15
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   21 YVDVRTPAEFAAGHIPRALNVSFTTP---DMKPLPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFNSWESDSTLPVEK 113
            Y+DVRTP EFAAGH+  A+N+ F       M     FV +  A      EI+VGC+SG+RS AA  +L  +G  G+ ++ GG+ +W   S LPV K
Sbjct:   17 YLDVRTPEEFAAGHVEGAVNIPFMYKFGTGMITNLDFVPEVSARFNKDDEIVVGCQSGRRSMAAATELLASGFTGVTDMGGGYGAW-IQSNLPVRK 111          
BLAST of Gvermi12372.t1 vs. uniprot
Match: A0A6I0EMW2_9BACT (Rhodanese-like domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A6I0EMW2_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 3.500e-15
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 MVTKLSPHAANEKLSQSSA-IYVDVRTPAEFAAGHIPRALNV--SFTTPDMKPL---PSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGFN 101
            M+ +++   A E+L      +Y+DVRTP EFA GH+P A+NV  +F  P    L   P FV D    +    +IIVGC+SG RS  A+ +L DAG  G + L GGF+
Sbjct:   51 MMPEINVKEARERLESGEGYVYLDVRTPEEFAEGHVPGAINVPVAFANPATGRLEANPDFVTDVIQVLDKDDKIIVGCRSGGRSAMALEQLIDAGYSGGVNLMGGFH 157          
The following BLAST results are available for this feature:
BLAST of Gvermi12372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK71_9FLOR2.310e-4970.64Thiosulfate sulfurtransferase 16, chloroplastic n=... [more]
A0A2J7ZSM1_9CHLO1.680e-1743.93Thiosulfate sulfurtransferase 16, chloroplastic n=... [more]
A0A0D2SS11_GOSRA6.160e-1740.37Rhodanese domain-containing protein n=3 Tax=Gossyp... [more]
A0A5J5NVF9_GOSBA6.870e-1740.37Rhodanese domain-containing protein n=6 Tax=Gossyp... [more]
A0A250XDV9_9CHLO1.070e-1642.74Rhodanese domain-containing protein n=2 Tax=Chlamy... [more]
A0A3M1E5Q4_9BACT1.250e-1642.86Rhodanese-like domain-containing protein n=1 Tax=P... [more]
A0A803MAU7_CHEQI3.210e-1641.05Rhodanese domain-containing protein n=3 Tax=Chenop... [more]
UPI001262F4829.850e-1639.45thiosulfate sulfurtransferase 16, chloroplastic-li... [more]
D8REU8_SELML3.010e-1542.71Rhodanese domain-containing protein (Fragment) n=4... [more]
A0A6I0EMW2_9BACT3.500e-1542.06Rhodanese-like domain-containing protein n=2 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 5..109
e-value: 2.9E-13
score: 60.1
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 8..105
e-value: 8.2E-16
score: 58.4
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 15..112
score: 15.901457
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 1..111
e-value: 2.1E-26
score: 94.3
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 4..112
NoneNo IPR availablePANTHERPTHR45431RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTICcoord: 5..106
NoneNo IPR availableCDDcd00158RHODcoord: 10..104
e-value: 4.05863E-22
score: 81.1918

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4393419..4393760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12372.t1Gvermi12372.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4393419..4393760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12372.t1 ID=Gvermi12372.t1|Name=Gvermi12372.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=114bp
MVTKLSPHAANEKLSQSSAIYVDVRTPAEFAAGHIPRALNVSFTTPDMKP
LPSFVDDFRAAVGDATEIIVGCKSGKRSTAAIAKLNDAGIQGLMELEGGF
NSWESDSTLPVEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001763Rhodanese-like_dom
IPR036873Rhodanese-like_dom_sf