Gvermi12165.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12165.t1
Unique NameGvermi12165.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length146
Homology
BLAST of Gvermi12165.t1 vs. uniprot
Match: A0A2V3J5H9_9FLOR (Haloacid dehalogenase-like hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H9_9FLOR)

HSP 1 Score: 187 bits (474), Expect = 1.500e-57
Identity = 90/135 (66.67%), Postives = 114/135 (84.44%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDPHSHPPADVVTIDALFPEL 135
            MD+AH+RGLKLA+CSAA+A + +LVL  +LG+ R+A   ++LAGD V +KKPHPMIY VA +++AV P+DCVV+EDS IGL+AALHAGMRVVITHTPYTA+QSF GAAAVY SLGD H+H  + +VT++ LFPEL
Sbjct:   71 MDEAHQRGLKLAICSAANAQAVQLVLHTLLGEKRLANFDLILAGDVVSKKKPHPMIYNVARDKLAVQPTDCVVIEDSHIGLTAALHAGMRVVITHTPYTASQSFQGAAAVYPSLGDIHTHHSSHIVTVNVLFPEL 205          
BLAST of Gvermi12165.t1 vs. uniprot
Match: R7QL62_CHOCR (HAD-like hydrolase family protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL62_CHOCR)

HSP 1 Score: 142 bits (357), Expect = 2.660e-39
Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDPHSHPPADVVTIDALFPELPPAPAA 141
            +D+AH RG++LA+CSAA+  S  +VL  ++G  R+ +   VLAGD V RKKP PMIY +A E++ V   DCV++EDS IGL A + AGM+VV+THTPYTA Q F GAAAV+ SLG+         V +D LFP+L   PA+
Sbjct:  118 VDEAHARGVRLAICSAANKNSCEIVLDNLMGKERLKKFEFVLAGDVVKRKKPDPMIYNLALEKLGVRVGDCVIIEDSEIGLQAGIQAGMKVVVTHTPYTADQDFKGAAAVFPSLGEKEGD---TFVDVDLLFPDLVGVPAS 255          
BLAST of Gvermi12165.t1 vs. uniprot
Match: A0A1X6NVK5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVK5_PORUM)

HSP 1 Score: 132 bits (333), Expect = 1.930e-36
Identity = 69/133 (51.88%), Postives = 92/133 (69.17%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDPHSHPPADVVTIDALFP 133
            +D+AH RGL  A+CSAA+  +    L  +LG+ R+ R  +VLAGDDV  KKP P+IY  A  R+ +A   CVV+EDS IG++AA+ AG+RVV+T T YTA+Q+FDGA  V  SLG+     P D+VT+D LFP
Sbjct:   60 IDEAHGRGLVTAICSAANKDAVGRALPVLLGEERLGRFDLVLAGDDVAAKKPDPLIYNTARARLGLAADACVVIEDSAIGVAAAVAAGLRVVVTTTEYTASQAFDGADRVVPSLGEVGVDAPEDIVTVDNLFP 192          
BLAST of Gvermi12165.t1 vs. uniprot
Match: A0A835TAS3_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TAS3_CHLIN)

HSP 1 Score: 133 bits (334), Expect = 3.380e-36
Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDPHSHPPADVVTIDALF 132
            MD+A   GLKLAVCSAA+ +S    L+ +LG+ R   L   LAGDDVP+KKP PMIY+VA+ER+ V PS+CVVVEDS IGL AA  AGMR +IT+TP T  Q+F GA  +   LG    +P   +VT+D L 
Sbjct:   73 MDEARAAGLKLAVCSAATKSSVVFTLKNLLGEGRFQGLDCFLAGDDVPKKKPDPMIYKVAAERLGVHPSECVVVEDSTIGLEAARAAGMRCIITYTPSTRTQAFPGAERIVMELGPSEVYP--IMVTVDELI 202          
BLAST of Gvermi12165.t1 vs. uniprot
Match: A8J8H2_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J8H2_CHLRE)

HSP 1 Score: 132 bits (331), Expect = 8.920e-35
Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDPHSHPPADVVTIDALF 132
            MD+A   GLKLAVCSAA+ +S    L+ +LG+ R   L   LAGDDVP+KKP PMIY+VA+ER+ V PS+CVVVEDS IGL AA  AGMR +IT+TP T  Q+F GA  +   LG    +P   +VT+D L 
Sbjct:  166 MDEARAAGLKLAVCSAATKSSVVFTLKSLLGEGRFQGLDCFLAGDDVPKKKPDPMIYKVAAERLGVHPSECVVVEDSTIGLEAARGAGMRCIITYTPSTKDQAFPGAERIVMELGPSEVYP--IMVTVDELI 295          
BLAST of Gvermi12165.t1 vs. uniprot
Match: A0A836BA58_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BA58_9CHLO)

HSP 1 Score: 130 bits (327), Expect = 3.280e-34
Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDPHSHPPADVVTIDAL 131
            MD+A   GLKLAVCSAA+ +S    L+ +LG+ R   L   LAGDDVP+KKP PMIY+VA+ER+ V PS+CVVVEDS IGL AA  AGMR +IT+TP T +Q+F GA  +   LG    +P   ++T++ L
Sbjct:  161 MDEARAAGLKLAVCSAATKSSVVFTLKSLLGEGRFNGLDCFLAGDDVPKKKPDPMIYKVAAERLGVHPSECVVVEDSTIGLEAAKGAGMRCIITYTPSTRSQAFPGAERIVMELGPSEVYP--IMITVEEL 289          
BLAST of Gvermi12165.t1 vs. uniprot
Match: A0A383VPW4_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VPW4_TETOB)

HSP 1 Score: 127 bits (318), Expect = 9.540e-34
Identity = 66/115 (57.39%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLG 115
            MDDA   GLK+AVCSAA+ +S    L+ +LG+ R   L   LAGDDV +KKP P IY VA++R+ V P+DCVVVEDS IGL AAL AGMR +IT+TP T  Q+FDGA  +   LG
Sbjct:   81 MDDARAAGLKVAVCSAATKSSVVFTLKNLLGEQRFNSLDCFLAGDDVDKKKPDPKIYNVAAQRLGVDPADCVVVEDSTIGLQAALGAGMRCIITYTPSTKQQAFDGADIILHELG 195          
BLAST of Gvermi12165.t1 vs. uniprot
Match: A0A8J4AY49_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AY49_9CHLO)

HSP 1 Score: 127 bits (319), Expect = 3.360e-33
Identity = 66/116 (56.90%), Postives = 83/116 (71.55%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGD 116
            MD+A   GLKLAVCSAA+ +S    L+ +LG+ R   L   LAGDDV +KKP P IYRVA+ER+ ++P++CVVVEDS IGL AA  AGMR +IT+TP T +Q F+GA  V   LGD
Sbjct:  162 MDEARAAGLKLAVCSAATKSSVVFTLKNLLGEGRFQGLDCFLAGDDVDKKKPDPKIYRVAAERLGLSPAECVVVEDSMIGLQAATGAGMRCIITYTPSTKSQEFNGAELVVPELGD 277          
BLAST of Gvermi12165.t1 vs. uniprot
Match: A0A835XKK6_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKK6_9CHLO)

HSP 1 Score: 125 bits (315), Expect = 2.320e-32
Identity = 71/137 (51.82%), Postives = 89/137 (64.96%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDP---HSHPPADVVTID-ALFP 133
            MD+A   GLKLAVCSAA+ +S    L+ VLG+ R   L   LAGDDV +KKP P IY++A+ER+ V P +CVVVEDS IGL AA  AGMR +IT+TP T +Q   GA  V   LGD    +S P A+ +  D  L+P
Sbjct:  154 MDEAREAGLKLAVCSAATKSSVEFTLKNVLGEGRFQGLDCFLAGDDVDKKKPDPTIYKIAAERLGVKPDECVVVEDSMIGLQAATGAGMRCIITYTPSTRSQGVPGAELVVPELGDGAGINSFPGAERIVCDLGLYP 290          
BLAST of Gvermi12165.t1 vs. uniprot
Match: M1UQE7_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UQE7_CYAM1)

HSP 1 Score: 126 bits (317), Expect = 2.750e-32
Identity = 66/139 (47.48%), Postives = 91/139 (65.47%), Query Frame = 0
Query:    1 MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDH---------RVARLHVVLAGDDVPRKKPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTAAQSFDGAAAVYASLGDPHSHPPADVVTIDA 130
            +D AH+RG++LA+CSA++  S   VL+R+L +          R      ++AGD VP+KKP P+IY VA ER+ VAPSDC+V+EDS IGL+AA  AG+R VIT+T YT +QSFDGA A++  L         D VT+ +
Sbjct:  229 IDTAHKRGIRLAICSASNRESVEAVLKRILSERPPGASRSKSRFEMFEFIIAGDSVPKKKPDPLIYEVALERLGVAPSDCLVIEDSAIGLAAARGAGIRCVITYTWYTKSQSFDGATAIFGELDGVSLDDILDAVTVSS 367          
The following BLAST results are available for this feature:
BLAST of Gvermi12165.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5H9_9FLOR1.500e-5766.67Haloacid dehalogenase-like hydrolase domain-contai... [more]
R7QL62_CHOCR2.660e-3951.77HAD-like hydrolase family protein n=1 Tax=Chondrus... [more]
A0A1X6NVK5_PORUM1.930e-3651.88Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A835TAS3_CHLIN3.380e-3654.55Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A8J8H2_CHLRE8.920e-3554.55Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
A0A836BA58_9CHLO3.280e-3453.44Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A383VPW4_TETOB9.540e-3457.39Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A8J4AY49_9CHLO3.360e-3356.90Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A835XKK6_9CHLO2.320e-3251.82Uncharacterized protein n=2 Tax=Edaphochlamys deba... [more]
M1UQE7_CYAM12.750e-3247.48Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 2..112
e-value: 2.5E-34
score: 121.0
IPR041492Haloacid dehalogenase-like hydrolasePFAMPF13419HAD_2coord: 5..92
e-value: 4.9E-12
score: 46.3
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01509TIGR01509coord: 46..93
e-value: 1.4E-12
score: 46.0
NoneNo IPR availablePANTHERPTHR42896:SF4OS08G0485900 PROTEINcoord: 1..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
IPR044999Protein CbbY-likePANTHERPTHR42896XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASEcoord: 1..116
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 2..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3645382..3645819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12165.t1Gvermi12165.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3645382..3645819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12165.t1 ID=Gvermi12165.t1|Name=Gvermi12165.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=146bp
MDDAHRRGLKLAVCSAASAASTRLVLRRVLGDHRVARLHVVLAGDDVPRK
KPHPMIYRVASERMAVAPSDCVVVEDSRIGLSAALHAGMRVVITHTPYTA
AQSFDGAAAVYASLGDPHSHPPADVVTIDALFPELPPAPAAPPSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR041492HAD_2
IPR006439HAD-SF_hydro_IA
IPR044999CbbY-like
IPR036412HAD-like_sf