Gvermi12164.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12164.t1
Unique NameGvermi12164.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length271
Homology
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A2V3JAE5_9FLOR (Thioredoxin-related transmembrane protein 2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JAE5_9FLOR)

HSP 1 Score: 423 bits (1088), Expect = 5.510e-148
Identity = 206/261 (78.93%), Postives = 232/261 (88.89%), Query Frame = 0
Query:    3 VDSRFLHPYYVLNAALVVAYAALRAKRLDPGELRAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAKQWEQDARQKFRQS 263
            VD+RFLHPYYVLN ALV+AY  LRAKRLDP EL  EDMFGITRE QIYFC  LM+ TR LSAPTLDAYL+SAFMF RVAI VLLW M   L+A+FLALWT++YAVCPQPR+KLP S+ TLN VT+N+RIARN+H+T+YVLWCHATWSARCSQL PVLASLA AY+HPR+RFARVDVSK+P L+DTLSVSVSPASKQLPTVICYKQG EVARIP MD+RGNLPK+W+RGF AAHVAEAL+LNTH  TAKQWEQ+A+Q+ RQS
Sbjct:    2 VDNRFLHPYYVLNVALVLAYVGLRAKRLDPHELSKEDMFGITREAQIYFCLFLMMATRTLSAPTLDAYLSSAFMFLRVAIVVLLWHMDKQLVAVFLALWTMIYAVCPQPRYKLPKSIVTLNNVTYNDRIARNKHKTIYVLWCHATWSARCSQLAPVLASLAKAYDHPRVRFARVDVSKYPTLADTLSVSVSPASKQLPTVICYKQGQEVARIPVMDQRGNLPKQWSRGFKAAHVAEALNLNTHFITAKQWEQEAQQRLRQS 262          
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A1X6P1N4_PORUM (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1N4_PORUM)

HSP 1 Score: 238 bits (606), Expect = 1.210e-74
Identity = 127/262 (48.47%), Postives = 171/262 (65.27%), Query Frame = 0
Query:    4 DSRFLHPYYVLNAALVVAYAALRAKRLDPGELRAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAKQWEQDARQKFRQSQA 265
             SRFL PYY+LNA L+ A+   R  R  P EL   D  G T+E QIYFC  LM +TRALSAPTLD YL+S  +F RVAI V+L+FM P L A+F+ L+T +  V PQPR   P +VS LN V+F ER+ RN+H+T+ V+W HA WS RC+ L P+L  L  AY+HPR+R+A++D S +  ++  L VS +  S+QLPTV+ + QG E+AR+P + R G   K      T A + E L L+  L  A+ WE++AR K  ++QA
Sbjct:   11 SSRFLSPYYLLNAILIGAFVLFRI-RDPPAELATVDPMGFTKESQIYFCAGLMYVTRALSAPTLDVYLSSVLLFTRVAIIVVLFFMSPALAAVFVILFTFVGLVFPQPRATTPAAVSVLNRVSFAERVTRNKHKTITVVWLHAPWSPRCTGLAPLLNRLVAAYDHPRLRWAKLDASVWTDVAADLDVSTAATSQQLPTVVVFSQGKELARLPTLGRDGG--KLEGLKMTYASLVEGLGLDERLRVAEAWEEEARNKLSKAQA 269          
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A7S2ZR16_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZR16_9RHOD)

HSP 1 Score: 173 bits (438), Expect = 2.190e-49
Identity = 95/268 (35.45%), Postives = 153/268 (57.09%), Query Frame = 0
Query:    2 IVDSRFLHPYYVLNAALVVAYAALRAKRLDPGELRAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAKQWEQDARQKFRQSQAQKKA 269
            +V+SRFL  +Y+L     +A+  LR K   P +L   D+ G TRE  I+    ++++ R  S+PT DA ++ AF F +VA+ V+ ++M   L  +F  +W  ++ + PQPR K P  V  LN   F+++I  N ++  +V+  H TWS  C+QL P+ AS+A  Y+H RI+F +VDV  +P L++   ++V+  S QLP+ + +K G E  R P +D  G    +         +   L L   L  A+ WE++A++KF + QA+KKA
Sbjct:    6 VVNSRFLAAHYLLQVLTFMAFFGLRLK-YPPTDLLVLDVLGYTREFTIWLSLGMVIVVRLFSSPTPDAIVSHAFKFTKVAMLVISYYMSKSLPIVFAGIWIAIFTLFPQPRAKDPKIVQILNRGNFDQKITNNDYKGFWVVQFHTTWSPLCTQLAPLFASIAQEYDHVRIKFGKVDVGLWPDLAEKHKINVAGTSSQLPSYVLFKIGKESNRYPALDADGKTVTEDISNANRNLIVANLSLKEVLEQAETWEEEAKKKFVKEQAKKKA 272          
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A830HZT9_9CHLO (Thioredoxin domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZT9_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 1.210e-29
Identity = 76/227 (33.48%), Postives = 125/227 (55.07%), Query Frame = 0
Query:    6 RFLHPYYVLNAALVVAYAALRAKRL----DPGELRAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLNPVTFNERIA---RNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPK 225
            RF  PYYV+N   +V Y  LR + L    + G  R ED      E +      ++LI R L + + D ++A+AF+F + ++A L + + P LL  +L L+ VL     QP ++ P     LNP+ F++R+    +++ +  +++   A+WS  C  + P  A L+  +    +RFA+VDV+++P L+    +S S  SKQLPT+I ++ G EVARIP +   G + K
Sbjct:   13 RFTSPYYVVNFMSLVTYLYLRTQVLLYTDEHGARRLEDW-----EQRTSSLLVIVLIGRFLRSSSPDEFVATAFLFCKASVAFLAYSISPRLLVWYLVLFGVLELTVYQPVYRGPCRYEYLNPMEFDDRVVNEGKDKPKDSWLVCFFASWSPPCVHVEPTFAKLSERFTTQSLRFAKVDVARWPVLAKKHGISTSGVSKQLPTIILFEGGREVARIPHVYPDGRVAK 234          
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A7S2ZRX6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRX6_9RHOD)

HSP 1 Score: 115 bits (288), Expect = 3.720e-28
Identity = 60/166 (36.14%), Postives = 95/166 (57.23%), Query Frame = 0
Query:  104 LYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAKQWEQDARQKFRQSQAQKKA 269
            ++ + PQPR K P  V  LN   F+++I  N ++  +V+  H TWS  C+QL P+ AS+A  Y+H RI+F +VDV  +P L++   ++V+  S QLP+ + +K G E  R P +D  G    +         +   L L   L  A+ WE++A++KF + QA+KKA
Sbjct:   13 IFTLFPQPRAKDPKIVQILNRGNFDQKITNNDYKGFWVVQFHTTWSPLCTQLAPLFASIAQEYDHVRIKFGKVDVGLWPDLAEKHKINVAGTSSQLPSYVLFKIGKESNRYPALDADGKTVTEDISNANRNLIVANLSLKEVLEQAETWEEEAKKKFVKEQAKKKA 178          
BLAST of Gvermi12164.t1 vs. uniprot
Match: T0Q8J6_SAPDV (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q8J6_SAPDV)

HSP 1 Score: 115 bits (287), Expect = 2.770e-27
Identity = 62/216 (28.70%), Postives = 116/216 (53.70%), Query Frame = 0
Query:    5 SRFLHPYYVLNAALVVAYAALRAKRLDPGEL-RAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASK-QLPTVICYKQGVEVARIPEMD 218
            +RFLHPY+++N AL+ +Y   R    +   +   ED  G+TRE Q++       I    +  T+DA ++ AF++ +  +A L + +   L   +L  W V + + P P+++ P  +  L+  +F  R+  ++ +T ++++ +A W   C     + A L+  +    ++F RVDV K P+L+   S+  +  S  QLPT+I ++ G E  R+P++D
Sbjct:    4 TRFLHPYFLVNTALIGSYFGARYMGYESDSIVDVEDYLGMTREQQMFVFLVGFTIINYPNKSTIDAIISMAFLYGKGGVACLFYMLDTTLFVYYLVAWLVAFVLLPYPKYQGPDEIVDLSADSFERRLRADK-KTKWIVYFYADWCEDCLHQDAMYAQLSLTHASDELKFGRVDVDKHPSLAREFSIDTNATSTIQLPTMILFEHGKEAKRLPKLD 218          
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A5B8MXI4_9CHLO (Thioredoxin domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MXI4_9CHLO)

HSP 1 Score: 114 bits (284), Expect = 1.120e-26
Identity = 66/226 (29.20%), Postives = 120/226 (53.10%), Query Frame = 0
Query:    5 SRFLHPYYVLNAALVVAYA-----ALRAKRLDPGELRAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPK 225
             RFL PYY+ NA ++++Y      A+  + L  G +  E    I+ E Q +    ++ + + +   +LD++ +  FMF +VA+AVL + +   L + +  ++T+++ +  QPR+  P   +   P + +E +  +   +  + + HA WS  C  L P +A L+  Y     +F + DV ++P + +   VS S  + QLPT+I +K G EVARIP + + G+  K
Sbjct:    5 GRFLQPYYLFNALILLSYPLARFWAMNTRGLRNGLVHTESEV-ISWEKQAFSLLGIITVVKFIKRQSLDSFFSDFFMFMKVAVAVLAFVLDVRLFSWYWMVYTIMFVLLQQPRYAGPSKFTHYTPASLHEAVNLDDGVSRLIEF-HAAWSPPCLHLEPAMAELSVKYTKDDFKFGKFDVGRWPYVGEGYKVSTSAIANQLPTLILFKGGKEVARIPHVFKDGSFVK 228          
BLAST of Gvermi12164.t1 vs. uniprot
Match: UPI001D06EB11 (thioredoxin-related transmembrane protein 2 homolog n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D06EB11)

HSP 1 Score: 114 bits (284), Expect = 1.250e-26
Identity = 76/250 (30.40%), Postives = 129/250 (51.60%), Query Frame = 0
Query:    8 LHPYYVLNAALVVAYAALRAKRLDP------GELRAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLN-PVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAK 250
            + PYY+ N  + ++Y  + AKRL        GE+  E + G   E   +    +M+ TR   + T+  YL+S+F++ ++A  +L ++    L  +F+ ++ +     P+P +  P +V     P   +E +AR++ R  +++  +A W+  C    PV + L+N Y+   ++F +VDV +FP    T  VS S  SKQLPT+I +K G EV R P  D +G L K     F+  ++  A DLN   +  K
Sbjct:   11 IRPYYLFNIFISLSY--IIAKRLPILCFFIFGEVECE-LDGRETEILFFLLIVIMIRTRKAGSVTMINYLSSSFIYTKIANMILWFYADVRLGLVFVVIFVLTGLFLPEPTYSGPENVIYFRGPTGLDEELARDK-RVTWLVAFYAVWNPACVNFAPVFSKLSNEYSLSNLKFGKVDVGRFPEAGKTYHVSDSSMSKQLPTLILFKDGKEVLRRPHADTKGKLQKFL---FSDENIKAAFDLNNLFSECK 253          
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A1D1UUU1_RAMVA (Thioredoxin domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UUU1_RAMVA)

HSP 1 Score: 114 bits (284), Expect = 2.280e-26
Identity = 65/250 (26.00%), Postives = 119/250 (47.60%), Query Frame = 0
Query:    6 RFLHPYYVLNAALVVAYAALRAKR-----LDPGELRAEDMFGITREHQIYFCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAK 250
            RF+HPY+V+N AL V++  LR  R     L      +       REH++      + + +   APT   YL     +A+VA   L +   P  + +++ L  +   + P+P +  P  +   + +   E+      R V+++    TWS +C  + P+ A L+  Y  P +RF ++D+ +F  + +  +++    ++QLPT+IC+K G EV R P +D +  + K     ++   + +  DLN      K
Sbjct:   25 RFVHPYFVVNMALAVSFMVLRLLRPFCTMLFKNTAESGQCELDLREHEVLIFVGCITVIKNRGAPTWQHYLKKFGTYAKVANVFLFYRQSPAYMIVYVVLCALQMVLLPEPIYSGPSKIEYFSGLDNMEKTISEDKRNVWIVCFFTTWSMKCIDMAPIFAELSAQYWLPNLRFGKIDIGRFSNVGEKYAIATGAWTRQLPTIICFKDGKEVLRRPFIDSKNRIEKY---EYSMPTLIQDFDLNNEYEACK 271          
BLAST of Gvermi12164.t1 vs. uniprot
Match: A0A1E1XS22_9ACAR (Putative thioredoxin-like protein n=4 Tax=Amblyomma TaxID=6942 RepID=A0A1E1XS22_9ACAR)

HSP 1 Score: 113 bits (282), Expect = 2.340e-26
Identity = 91/266 (34.21%), Postives = 136/266 (51.13%), Query Frame = 0
Query:    6 RFLHPYYVLNAALVVAYAALRAKR-----LDPGELRAEDMFGITREHQIYFCTALMLI--TRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLALWTVLYAVCPQP-RFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSARCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLPTVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAKQWEQDARQKFRQS 263
            R LHP+YV+N  L   +  LR  R     L PG     D     RE +I    A++++  TR      L  YLA+A M+A+VA  +L  +  P L  L+ AL  +   V P+P  +  P  V  L+  +F E +     R  +++  +A WS  C Q+ P  A LA  Y    +RFA++DV++FP L+    VS +P S+QLPTV+ ++ G   AR P  D +G     +   F+  ++A A DLN   N  ++  QD R+K +QS
Sbjct:   11 RLLHPHYVVNLLLAACFPVLRLVRPFCDVLFPGGDCQLDF----RETEILTFVAVVVLFRTRKTGVVRLLPYLATACMYAKVAGLLLFVYWDPRLGLLYGALCLLQMLVLPEPPAYGGPDPVLYLDDDSFRELVQHGDRRVAWLVAFYALWSPACVQMAPAFAQLAARYALDNLRFAKLDVTRFPDLAHEHHVSTTPLSRQLPTVLLFRGGRVAARRP--DAQGGRLAPFV--FSEENMAAAFDLN---NLHRECRQDLRRKPKQS 265          
The following BLAST results are available for this feature:
BLAST of Gvermi12164.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3JAE5_9FLOR5.510e-14878.93Thioredoxin-related transmembrane protein 2-like n... [more]
A0A1X6P1N4_PORUM1.210e-7448.47Thioredoxin domain-containing protein n=1 Tax=Porp... [more]
A0A7S2ZR16_9RHOD2.190e-4935.45Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A830HZT9_9CHLO1.210e-2933.48Thioredoxin domain-containing protein n=2 Tax=Pycn... [more]
A0A7S2ZRX6_9RHOD3.720e-2836.14Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
T0Q8J6_SAPDV2.770e-2728.70Thioredoxin domain-containing protein n=2 Tax=Sapr... [more]
A0A5B8MXI4_9CHLO1.120e-2629.20Thioredoxin domain-containing protein n=1 Tax=Chlo... [more]
UPI001D06EB111.250e-2630.40thioredoxin-related transmembrane protein 2 homolo... [more]
A0A1D1UUU1_RAMVA2.280e-2626.00Thioredoxin domain-containing protein n=1 Tax=Rama... [more]
A0A1E1XS22_9ACAR2.340e-2634.21Putative thioredoxin-like protein n=4 Tax=Amblyomm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 119..216
e-value: 1.1E-8
score: 35.0
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 119..246
e-value: 1.6E-20
score: 75.3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 111..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3644321..3645133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12164.t1Gvermi12164.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3644321..3645133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12164.t1 ID=Gvermi12164.t1|Name=Gvermi12164.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=271bp
MIVDSRFLHPYYVLNAALVVAYAALRAKRLDPGELRAEDMFGITREHQIY
FCTALMLITRALSAPTLDAYLASAFMFARVAIAVLLWFMHPHLLALFLAL
WTVLYAVCPQPRFKLPPSVSTLNPVTFNERIARNRHRTVYVLWCHATWSA
RCSQLVPVLASLANAYNHPRIRFARVDVSKFPALSDTLSVSVSPASKQLP
TVICYKQGVEVARIPEMDRRGNLPKKWARGFTAAHVAEALDLNTHLNTAK
QWEQDARQKFRQSQAQKKAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf