Gvermi12252.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12252.t1
Unique NameGvermi12252.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length185
Homology
BLAST of Gvermi12252.t1 vs. uniprot
Match: A0A2V3J075_9FLOR (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J075_9FLOR)

HSP 1 Score: 248 bits (634), Expect = 1.360e-81
Identity = 120/184 (65.22%), Postives = 147/184 (79.89%), Query Frame = 0
Query:    1 MSVPSFVSPTHTSWLTRRKSPEHHHSCPRRHTRTTATPSLVFDPNSVGTGYALLNSLKGVVIGPTVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKSCSTCNEKGFLLCNHCDGDGRLIPWAYERAIRAQYEDYVYTAIDDYFQDGPPYV 184
            M   SFVS T  +  + ++S +   +     +   A P ++ DP++VGTG+ALLNS KG+VIGPTV EITAA AGGTVGVMGTIITLE++R +VK RKQCPYCRG+GKLPCA+CYT+G++PS  A  +Q+ C+ CNE+GFL CNHCDGDGRLIP AYERAIRAQYEDYVYTAIDDY+QDGPPY+
Sbjct:    1 MQCQSFVSSTPLNLQSTKESGKQVCNRLANSSPAHAAPKMIIDPSTVGTGFALLNSFKGIVIGPTVTEITAAIAGGTVGVMGTIITLELQRQRVKHRKQCPYCRGTGKLPCASCYTIGAVPSRTALTAQEVCTCCNERGFLQCNHCDGDGRLIPLAYERAIRAQYEDYVYTAIDDYYQDGPPYI 184          
BLAST of Gvermi12252.t1 vs. uniprot
Match: R7QE93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE93_CHOCR)

HSP 1 Score: 249 bits (635), Expect = 5.800e-81
Identity = 115/147 (78.23%), Postives = 128/147 (87.07%), Query Frame = 0
Query:   38 PSLVFDPNSVGTGYALLNSLKGVVIGPTVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKSCSTCNEKGFLLCNHCDGDGRLIPWAYERAIRAQYEDYVYTAIDDYFQDGPPYV 184
            P +V DP +VGTGYA LN LKGVVIGPT+NEITAA AGGTVGVMGTIITLEVRR +VKERKQCPYCRG+GKLPCATCYT+G++P   A ++Q  C+ CNE+GFL CNHC GDGRLIPW YERAI AQYEDY YTAIDDY+QDGPPYV
Sbjct:   92 PHMVLDPANVGTGYAFLNGLKGVVIGPTINEITAAIAGGTVGVMGTIITLEVRRQQVKERKQCPYCRGNGKLPCATCYTVGAVPCGDALSAQTGCAVCNERGFLECNHCQGDGRLIPWVYERAISAQYEDYTYTAIDDYYQDGPPYV 238          
BLAST of Gvermi12252.t1 vs. uniprot
Match: M2Y0D2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0D2_GALSU)

HSP 1 Score: 122 bits (306), Expect = 3.600e-32
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 0
Query:   62 IGPTVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKSCSTCNEKGFLLCNHCDGDGRLIPWAYERAIRAQYED 167
            I PTVNE+T+A AGGTVGVMGT++ LEV R +++E +QCPYCRG  KLPC  CY +G +P  +    +  C  C  +G +LC HCDG GR +P  YERA+  Q E+
Sbjct:   46 IPPTVNEVTSALAGGTVGVMGTLLVLEVIRQRIEEMRQCPYCRGLRKLPCGLCYGMGFIPDVSCLYCKSDCENCGGEGSVLCCHCDGSGRYLPVEYERALFWQGEE 151          
BLAST of Gvermi12252.t1 vs. uniprot
Match: A0A5J4ZBM1_PORPP (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZBM1_PORPP)

HSP 1 Score: 115 bits (287), Expect = 1.900e-27
Identity = 67/150 (44.67%), Postives = 89/150 (59.33%), Query Frame = 0
Query:   33 RTTATPSLVFDPNSVGTGYALLNSLKGVVIGPTVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKSCSTCNEKGFLLCNHCDGDGRLIPWAYERAIRAQY-EDYVYTAIDDYFQDGP 181
            R  A P+ V +    G   A+ + L    + PT+ +I +AFAGGTVGVMGT+I LE  +    ER+QC YCRG+GKL C +C  L  +P A     Q+ C  C+ +G + C HC+G GRL+P  YERA+RAQY ED+     D  F D P
Sbjct:  203 RVAAAPTAVVEFFESGKQLAV-DILGSPQVYPTIMQIGSAFAGGTVGVMGTLIALEWAKIDTLERQQCSYCRGTGKLICGSCCGLRVMPDAQ--TGQRDCDNCSGQGGVECMHCEGSGRLLPIRYERALRAQYREDWARGNFDGDFFDNP 349          
BLAST of Gvermi12252.t1 vs. uniprot
Match: A0A7S0G9E2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G9E2_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 1.480e-25
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 0
Query:   57 LKGVVIGPTVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKSCSTCNEKGFLLCNHCDGDGRLIPWAYERAIRAQ 164
            +K  ++ P  N+I +AFAGGTVGVM +++    R  ++KE++QC YCRG+G LPC  CYT+G++P+      + +C  C+ +G++ C HC G GR  P  + +  R+Q
Sbjct:   28 MKDTLLTPQTNQIMSAFAGGTVGVMSSVLIYGKRVQELKEKQQCCYCRGAGTLPCGQCYTIGAVPTPGMPLGKSNCEACDRRGYITCEHCRGTGRADPLDFSKKTRSQ 135          
BLAST of Gvermi12252.t1 vs. uniprot
Match: M1UXZ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXZ1_CYAM1)

HSP 1 Score: 103 bits (257), Expect = 1.890e-24
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 0
Query:   66 VNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKSCSTCNEKGFLLCNHCDGDGRLIPWAYERAIRAQYE 166
            + E+ +AFAGG++GV+GT++TLE+ + + +ER QCPYC G GKL C  C  LG+LP+  +      C  C   G++ CNHC+G GRL     ERA    YE
Sbjct:   84 IQELASAFAGGSIGVLGTLLTLELAQTRARERMQCPYCSGRGKLVCGQCLALGTLPNRKSPDGTVPCRLCGRSGYVPCNHCEGTGRLFQEEVERAALQTYE 184          
BLAST of Gvermi12252.t1 vs. uniprot
Match: A0A7S1TK16_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK16_9RHOD)

HSP 1 Score: 86.7 bits (213), Expect = 2.020e-18
Identity = 50/121 (41.32%), Postives = 62/121 (51.24%), Query Frame = 0
Query:   65 TVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKS-------------------CSTCNEKGFLLCNHCDGDGRLIPWAYERAIRAQYE 166
            TV +I AAFAGGTVGVMG++I  E+R+ + KE KQCPYC G+G+L C  C   G L  +   A  K+                   CS C     + C HC GDGR+IP   E A     E
Sbjct:   22 TVAQIAAAFAGGTVGVMGSLIAWELRQLRDKESKQCPYCLGTGRLRCGRCLGQGELLISEVGAQAKALPKTESPQPLQQQLDGFVKCSQCEGAASVECCHCGGDGRIIPETIEHAATGDLE 142          
BLAST of Gvermi12252.t1 vs. uniprot
Match: D8LRQ7_ECTSI (DnaJ Cysteine-Rich Domain-Containing Protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ7_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.210e-16
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0
Query:   67 NEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQKS---CSTCNEKGFLLCNHCDGDGRLIPWAYER 159
            NE  A  AGG+VGV+GT+I LE+++ K+K R+ CPYC GSGKL CA C++ G+       +   S   C  C    ++ C +C GDGR +P   +R
Sbjct:  118 NEWIAGVAGGSVGVLGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAVCFSAGTFTVKLPGSDTYSTLPCPGCAGNKYITCLNCRGDGRAVPRELDR 213          
BLAST of Gvermi12252.t1 vs. uniprot
Match: A0A7R9U8V3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8V3_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.110e-12
Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0
Query:   56 SLKGVVIGPTVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSLPSAAAAASQ 129
            +L+G+V+  T  ++  AFAGGTVGVMG+++ +E+R+ + ++R  CPYC G+G+L CA C+  G +  A A  SQ
Sbjct:   35 TLEGLVVN-TAGDVACAFAGGTVGVMGSLVAIEIRKLQQRKRNACPYCVGTGRLTCAVCWGAGKVEIAGAQGSQ 107          
BLAST of Gvermi12252.t1 vs. uniprot
Match: A0A835YW14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW14_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.330e-12
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   66 VNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQCPYCRGSGKLPCATCYTLGSL 120
            VNE+ + FAGGTVGVMGT+I LE+++  V +R  CPYC+G+G L CA CY +G L
Sbjct:   79 VNELMSGFAGGTVGVMGTLIGLELKKQNVVKRSVCPYCQGAGTLTCARCYGVGIL 133          
The following BLAST results are available for this feature:
BLAST of Gvermi12252.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J075_9FLOR1.360e-8165.22Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracila... [more]
R7QE93_CHOCR5.800e-8178.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2Y0D2_GALSU3.600e-3252.83Chaperone protein / DnaJ-related protein n=1 Tax=G... [more]
A0A5J4ZBM1_PORPP1.900e-2744.67Protein ORANGE-LIKE, chloroplastic n=1 Tax=Porphyr... [more]
A0A7S0G9E2_9RHOD1.480e-2540.74Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
M1UXZ1_CYAM11.890e-2445.54Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7S1TK16_9RHOD2.020e-1841.32Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
D8LRQ7_ECTSI2.210e-1642.71DnaJ Cysteine-Rich Domain-Containing Protein n=2 T... [more]
A0A7R9U8V3_9STRA1.110e-1244.59Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835YW14_9STRA4.330e-1258.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..89
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 92..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3979153..3979821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12252.t1Gvermi12252.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3979153..3979821 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12252.t1 ID=Gvermi12252.t1|Name=Gvermi12252.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=185bp
MSVPSFVSPTHTSWLTRRKSPEHHHSCPRRHTRTTATPSLVFDPNSVGTG
YALLNSLKGVVIGPTVNEITAAFAGGTVGVMGTIITLEVRRHKVKERKQC
PYCRGSGKLPCATCYTLGSLPSAAAAASQKSCSTCNEKGFLLCNHCDGDG
RLIPWAYERAIRAQYEDYVYTAIDDYFQDGPPYV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf