Gvermi12101.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12101.t1
Unique NameGvermi12101.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length281
Homology
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BLAST of Gvermi12101.t1 vs. uniprot
Match: A0A2V3J5K3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K3_9FLOR)

HSP 1 Score: 252 bits (643), Expect = 5.680e-80
Identity = 158/283 (55.83%), Postives = 187/283 (66.08%), Query Frame = 0 
Query:    1 MVTDVETSPALGSPQKLSTPVAKPNSVSA--KKXXXXXXXXXXXXXXXXXGSASPLPSEA--QDDPMFSDTSPGALERWKHRVQSLRSSLNQAQAENRSLSADLKAAMARANDAEQAESAVNKGLLTARSVISQRDRSIAELNVIVSNQRADFRRLEDEKKKLDRRLVLLKTVSANLQEAREERDTAEKKLEDSQSNVARLKKRLAXXXXXXXXXXXXXXXXXXXXXXXXKLQSQLHDLREEKHHTEQQAAKRSAIIAGASAVGGAVAGLAFCLLTRAKDDNE 279
            MVT VET   L   Q L    + P+SVS   K+                 GSASP PSEA  Q+D + S+T    +E+WKHR QSLRSSLNQ Q ENR LS DLKAA+ARANDAEQAE+AVNKGLL+ARSVISQRDRSIAELN +VSNQRAD RRLEDEKKKLDRRL+LLKTVSANLQEARE RD AEK+LE+S SN ++L+K++A                        KL  Q+HDL +EK  +EQ+A +   + A A AVGGAV  LA  LL+R  D+ +
Sbjct:    1 MVTKVETVSILEPTQDLENNPSTPSSVSGSTKRKKKRRNGQSGNTPDLSSGSASPAPSEAPSQEDLVHSETPARTMEQWKHRAQSLRSSLNQVQNENRVLSTDLKAAVARANDAEQAEAAVNKGLLSARSVISQRDRSIAELNAMVSNQRADLRRLEDEKKKLDRRLILLKTVSANLQEAREGRDAAEKRLEESNSNASQLRKKVAKAEERIEALNKHVEALDMTKKQVEKLHCQIHDLHDEKELSEQKATRNVVLAASAGAVGGAVVTLALSLLSRPNDEKD 283
The following BLAST results are available for this feature:
BLAST of Gvermi12101.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5K3_9FLOR5.680e-8055.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..113
NoneNo IPR availableCOILSCoilCoilcoord: 135..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..280
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..271
NoneNo IPR availableTMHMMTMhelixcoord: 250..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3414101..3414943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12101.t1Gvermi12101.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3414101..3414943 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12101.t1 ID=Gvermi12101.t1|Name=Gvermi12101.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=281bp
MVTDVETSPALGSPQKLSTPVAKPNSVSAKKKKKRRNGTSGSNSENSSGS
ASPLPSEAQDDPMFSDTSPGALERWKHRVQSLRSSLNQAQAENRSLSADL
KAAMARANDAEQAESAVNKGLLTARSVISQRDRSIAELNVIVSNQRADFR
RLEDEKKKLDRRLVLLKTVSANLQEAREERDTAEKKLEDSQSNVARLKKR
LAHLQEIIEGHEKQLEVLEMTKKHVDKLQSQLHDLREEKHHTEQQAAKRS
AIIAGASAVGGAVAGLAFCLLTRAKDDNEH*
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