Gvermi12420.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12420.t1
Unique NameGvermi12420.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1091
Homology
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A2V3IIT0_9FLOR (Retinoblastoma-associated protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIT0_9FLOR)

HSP 1 Score: 644 bits (1661), Expect = 1.680e-217
Identity = 357/608 (58.72%), Postives = 424/608 (69.74%), Query Frame = 0
Query:  478 LRRVTGGGRALQAIIDVGRRYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLHNYILHKSFLTFAWETTVAAYGRRDLHVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRLDLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTFLSNSPAVFRNISLEDYGHLLTEDATEDEELKMAG--IKDKTGDIIRFYNEAFVPHMRDFILPMGEDLGSFN------------TDGHDAGKLAEAVGEDKADDQGAEGLNDLARRASRREGQERKEMFEDLGRKLLQSPMRIMRTRRSPVRIGSIVVSPMSPSTRNMVLSRQNSVRRSRTNGVGSMTPGTRALFAFGESPMGSVAVIHRRRER-------RRYRPLSFDGPVADARSAAVRREVREVIGRSGR 1064
            +R + G  R L+A+ID+GRRYS+ALCNV+K+ N   YKR ALAVYF A+EGIL+KEHRRL  Q  KFS+ VL N ILHKSFLTFAWETT AAYG++DL+VFTVAYRAFNVSPFELTKALDAFCTLVPQMPR LVNH+I CDARILEWMAWR DSPLV VLQAY +DR+RMQ+ + ++    S +T                     +H   SS V P    G          LE     +    L+EMERPERLY DVEAR RVLDFFYEKVFALAGTRTEELLRRL+L  LR PVWR +KY LWCRWNLVINRHVDL+I+CVIYGVAKV+H++L+FR IV  Y +++HT D TF   S AV+RNI+L+DYGHL+     +D E   AG  +  +  DIIRFYN++FVPHM+ FILP+G++                 +DG   G+     GED     G   LN LAR ASR+ G  R+EMF+DLGRKLL+SPMR++RTRRSP RIG I+VSPMSPSTRNMV +RQ+S RR      G MTPGTR LF+FGESPM ++  +  R           +Y PLSFDGPVA  RSAA RREV+ +IGRSGR
Sbjct:    1 MRTLAGSPRPLKAVIDLGRRYSDALCNVLKEFNVPHYKRAALAVYFYAIEGILQKEHRRLSNQLHKFSAKVLQNAILHKSFLTFAWETTAAAYGKKDLNVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRSLVNHMINCDARILEWMAWRHDSPLVNVLQAYGRDRLRMQQSSGQASAPGSPQTP--------------------QHRNSSSDVQPSSSGG----------LEQSASTEAPSPLREMERPERLYSDVEARVRVLDFFYEKVFALAGTRTEELLRRLNLTCLRKPVWRSIKYCLWCRWNLVINRHVDLIIMCVIYGVAKVQHLRLRFREIVHEYKQMEHTCDPTFDCESAAVYRNITLDDYGHLIDYKFNDDNE-DAAGNPVLTEKVDIIRFYNKSFVPHMKQFILPIGDETLPLEHGDGMEVDTGGPSDGDGTGREEAGAGED-----GEVELNTLARAASRQRGLRREEMFQDLGRKLLESPMRVLRTRRSPRRIGHIIVSPMSPSTRNMVANRQSSGRRGEGASGGPMTPGTRRLFSFGESPMPTLTPMETREGADGETGLGSQYVPLSFDGPVAQERSAAFRREVQMIIGRSGR 572          
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A2V3IIU5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU5_9FLOR)

HSP 1 Score: 341 bits (875), Expect = 1.260e-103
Identity = 224/455 (49.23%), Postives = 264/455 (58.02%), Query Frame = 0
Query:    1 MQTERPHQLPHSPSPD-------DCIDVLVHRLAFPARVANLARSIHDSAIPSPPDLYSSACALYIASVAHRAHQIPQLPLSQLLDAANAQ---------VRHVPEHILNAQTPQRQTFNRSTPPSPPPAS---RAVRPSHTAFMVTAYVWRKLHFLIARRLLHHHPSAPRLAWLLFIVAKASLSSPSHSGYTHVQAYHLLLACLMQSGLITADDPENAIFRATCAVPSELHHYRRAVDTLLPPPIQQRLPFFPAPDAHLHTHLDAHCDALDHVYSQQLTAVDDLLVSDERIFLHAPQLAAVTAPPLSPSIRPQSSCNGTPTPSHIPCAPPSSLPHPSSPTQSTSXXXXXXXPSTPLKRKRPLDEQSQSASITPRXXXXXXAADFAVTPSSARPPTPRRPRVRSTLLTPLSSPARFSRYV-STHPDALEALATVAAVTPHCTTTLPPTPPSSNVP 435
            M   RP Q  H P P        DCID LVHRLA P  +A LA  IH++A+P+  D Y++ACALY+AS+A RA QIPQLPLS+LL AA++            H P  +++++     +    TPPS PP +   R V  SHTAFMV+A+VWRKL +LI R LL +HPS PRL WL FIVAKA++SSP+    THVQAYHLLLACL+QSG I A DPE A+FR TC VPSEL HY+RA+D LL   I+ RLPF P    H    L   C  LDH Y  QLT V   L +DERIFLHAP LAAV +PP+SP                      S+ P    P+ ST          TP                   XXXXXX       PSSARPPTP R R RS   TP+S+P RFSRY  ST  DAL+ALATVAAVTPH   +LP TPP    P
Sbjct:    1 MPQARPIQRSHIPFPHFPTQHEPDCIDFLVHRLALPDHLATLAHYIHNTALPTASDPYTAACALYVASIAFRADQIPQLPLSRLLGAASSDRIPLRITTHFTHNPTMVVDSERHSPTSPQHLTPPSTPPEAPLVRRVHLSHTAFMVSAHVWRKLRYLIDRNLLVNHPSVPRLPWLFFIVAKATISSPTDCNLTHVQAYHLLLACLLQSGFIEAPDPERALFRVTCVVPSELQHYKRALDDLLHKCIRTRLPFLP----HSDQVLQQICQQLDHAYDAQLTNVKHRLATDERIFLHAPNLAAVGSPPISPVF--------------------SASPLNQQPSAST----------TPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHPSSARPPTPAR-RPRSASHTPMSTPTRFSRYAASTRADALDALATVAAVTPHSAASLPATPPPQPFP 420          
BLAST of Gvermi12420.t1 vs. uniprot
Match: R7QJ10_CHOCR (Similar to Retinoblastoma-associated protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ10_CHOCR)

HSP 1 Score: 281 bits (720), Expect = 2.200e-78
Identity = 209/652 (32.06%), Postives = 313/652 (48.01%), Query Frame = 0
Query:  432 SNVPLTPVTDSSRSITWISERREKRPETRIET-YLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEK--FSSNVLHNYILHKSFLTFAWETTVAAYGRRDLHVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRLDLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTFLSNSPAVFRNISLEDYGHLLTE-DATEDEELKMAGIKDKTGDIIRFYNEAFVPHMRDFILPMGEDLGSFNTDGHDAGKLAEAVGEDKADDQGAE-----GLNDLARRASRREGQE-RKEMFEDLGRKLLQSPMRIMRTRRSPVRIGSIVVSPMSPSTRNMVLSRQNSVRRSRTNGVGSMTPGTRALFAFGESPMGSVAVIHR------------RRERRRYRPLSFDGPVADARSAAVRREVREVIGR 1061
            SNVP TP++    S+ W+ +  ++RPET  E  +  C  + +PTTD + RV         I++  R  S+ L     DL     KREA+AV+F+A E IL +E  RL+ + EK     N+     +HKS L  +WE T A+YGRRDL VF  A  AF +  F++ K ++ F  L P MPR L +H+  C  R+LE MAW   S LV+ L+A S     ++  + +S +  SE   D      N  ++A     K E A +  P  P+     F+                                       L+FF++K+ ++A  R +ELL RL +  +  PVW  +K+A+W +W+L+++RH+D +I+C IYGVAKV   +L+FR I+  Y  + H  +S+F    P VFR +SL+ +  L+   D +     +   +K   GDII+ YN+ F+  M+  IL      GS  T       +A A   D   +Q        G    +  A   EG   R E  + L  K++ SPMR++    SP RIG + VSPMSP  R++V  RQ+  R    + +GS               + S+  I+R            R   RR  PLSF+G     R+A+VRR   +V+ +
Sbjct:   50 SNVPATPISSGCASVLWLKKLAQERPETEDEDHFFDCTSKDMPTTDAMMRVLKTDDVWLNIVNTTRALSDKLAEKTPDLAGPDRKREAMAVFFAAFESILLREDARLKAKKEKPWVIDNLGRATSIHKSLLLCSWEITSASYGRRDLTVFNAAIEAFEIPAFDILKIIEPFARL-PDMPRPLASHINLCGVRVLECMAWTPGSKLVKNLRARS-----LEVASKKSTKQASENGKD-----TNGAAAAS----KEEEANKQDPPVPENATREFA---------------------------------------LEFFFKKLLSVASDRAQELLIRLGMDLIAEPVWAAIKHAVWEKWHLMVDRHIDQIIMCCIYGVAKVGMYELKFRDIIQAYQTMAHVRESSFSHYLPGVFRTVSLKSHLDLMPSGDTSPPRPARNGDVKGDRGDIIKLYNQVFIHAMKSHILAFQVRNGS-PTSRSVRNSVASAASPDLQRNQSTSATSMRGSCSESSAAGTAEGSHLRDENKDPLNDKVMSSPMRVLLPHASPRRIGRVTVSPMSPGGRSLVAIRQSPGRTGAGSIIGSXXXXXXXXXXXXXXXVRSLDRINRSLVQDSSGGMSGRNISRRAVPLSFEGSGVGQRTASVRRRFADVLSK 646          
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A7S3A3H1_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3H1_9RHOD)

HSP 1 Score: 196 bits (498), Expect = 9.860e-48
Identity = 187/666 (28.08%), Postives = 295/666 (44.29%), Query Frame = 0
Query:  406 DALEALATVAAVTPH--CTTTLPPTPPSSNVPLTPVTDSSRSITWISERREKRPETRIETYLTCPLESVPTTDGLRR---VTGGGRALQAIIDVGRRYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNV---LHNYILHKSFLTFAWETTVAAYGRRDLHVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRLDLINLRTP-VWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRH--IQLQFRHIVWHYNRLDHTNDSTFLSNSPAVFRNISLEDYGHLLTEDATEDEELKMAGIKDKTGDIIRFYNEAFVPHMRDFILPMGEDLGSFNTDGHDAGKLAEAVGEDKADDQGAEGLNDLARRASRREGQERKEMFEDLGRKLLQSPMRIMRTRRSPVRIGSIVVSPMSPSTRNMVLSRQNSVRRSRTNGVGSMTPGTRALFAFGESPMGSVAVIHRRRER-RRYRPLSFDGPVADARSAAVRREVREVI 1059
            DAL+ALA VA V+P   C T +   P    +P TPV+ S  S+TW+    + RPE       + P +S      L R   +   GRA + +          L      +  N+  RE  AVYF+++EGIL  E +RL+      +SN+    HN   H + L  + ET   AYGRR+   F      F++ PF+LTK +++F    P +P+ +  HL+ C+ RILE +AW   S LVR L+   +           S Q+++   S G   +++ +  ++S      H  + +P  P    GT    E   ++                 P+      EA    LD F+ K+  +   R + L  R  L + +   VW   KY +  +W L+I RH+D +I+C +YGVAK+      ++F  I   Y  L HT + +F     +++ ++ L   G                  K++ GDII+FYN  FV +M+ F+L     + +         K A A          +E + DL+               + +   +L SPMR   T + P  +G + +S MSPS      SR    R      +G+M+P TR L+AFGESP+ +   ++R  E  RR R  S +    ++   A+ R+  +V 
Sbjct:  353 DALDALAAVAHVSPRSPCETIMQKGP--KPIPQTPVSVSIVSVTWLKSLADARPE---NAGFSPPRQSQHFERMLSRDSWLAICGRAQKML-------GTYLRKNYGTITANQKIRETTAVYFASLEGILRAEEKRLK------TSNLDALAHNGTFHCALLAISCETASVAYGRREFAPFPKILDDFDIEPFDLTKVVESFIKHTPGLPKAIGRHLLRCEERILEKLAWMPGSALVRSLEIREEKYRGESGSADDSQQSDTGNFSQGTVDLISSSQLSESV-----HENRGTPTIPCVGNGTHDVTESAGIV-----------------PKPFVEVPEA---ALDIFFRKLLFVGSARLQALSTRAGLSSAQVENVWSAFKYIVSEKWRLIIGRHLDQMIMCCVYGVAKLSQETSSMKFSDITRWYEMLPHTREESFKQYVSSIYVDVKLSGDG------------------KNEQGDIIKFYNHVFVQNMKGFLLEYRSRIAT---------KKALA----------SEDVRDLS--------------GDPIKAHILASPMRTSNTEQQPRVVGKVKISSMSPS------SRMQMSRAGFGAPLGTMSPATRTLYAFGESPILNYHNLNRNLEEGRRLRLNSREENSEESAVKAIWRKYADVF 918          
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A7S0BJ67_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJ67_9RHOD)

HSP 1 Score: 162 bits (411), Expect = 3.100e-38
Identity = 142/499 (28.46%), Postives = 234/499 (46.89%), Query Frame = 0
Query:  406 DALEALATVAAVTPH--CTTTLPPTPPSSNVPLTPVTDSSRSITWISERREKRPETRIETYLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSEALCNVIKD----LNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNV---LHNYILHKSFLTFAWETTVAAYGRRDLHVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVR-SPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRLDLINLRTP-VWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRH--IQLQFRHIVWHYNRLDHTNDSTFLSNSPAVFRNISLEDYGHLLTEDATEDEELKMAGIKDKTGDIIRFYNEAFVPHMRDFIL 891
            DAL+ALA VA V+P   C TT+   P    +P TPV+ S  S+TW+    + RPE       + P +S      L R         + + +  R  + LC   +     +  N+  RE  AVYFS++EGI+  E +RL+      +SN+   ++N   H++ L  + ET   AYGRRD   F       ++ PF++TK +++F    P +P+ +  HL+ C+ RILE +AW   S LV  L+   +++ R +  +   S Q+++   S G   +++ +  ++S      H    +   P    G+    E   V+                 P+      EA    LD F+ K+  L   R + L  R  L +++    W  +KY L  +W L++ RH+D +I+C +YGVAK+      ++F  I   Y  L HT + +F     +++                  D +L + G K++ GDII+FYN+ FV +M+ F+L
Sbjct:  104 DALDALAAVAHVSPRSPCETTMQKVP--KPIPQTPVSVSIVSVTWLKSLADTRPE---NAGFSPPKQSQHFERMLSR--------DSWVAICSRAQKMLCTYWRKHYGTITANQKIRETTAVYFSSLEGIMLAEEKRLK------TSNLDALVNNGTFHRALLAISCETASVAYGRRDFAPFPKILDDLDIEPFDMTKVVESFIKHTPSLPKAVGRHLLRCEERILEKLAWMPGSALVGSLEI-REEKYRGENGSANDSQQSDTCNFSQGTVDLISSSQLSESV-----HENGRTAAIPSVGNGSHDATESAGVV-----------------PKPFVEVPEA---ALDIFFRKLLFLGSGRLQALSTRAGLSSIQVENAWSALKYILSEKWKLLVGRHLDQMIMCCVYGVAKLSQETSSMKFSDITRWYEVLPHTREESFKQYVSSIY-----------------VDVKLSVDGEKER-GDIIQFYNQVFVQNMKRFLL 539          
BLAST of Gvermi12420.t1 vs. uniprot
Match: UPI001C4AA3A9 (LOW QUALITY PROTEIN: retinoblastoma-associated protein n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4AA3A9)

HSP 1 Score: 115 bits (289), Expect = 1.620e-22
Identity = 115/426 (27.00%), Postives = 195/426 (45.77%), Query Frame = 0
Query:  434 VPLTPVTDSSRSI---TWISERREKRPETRIETYLT-CPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLHNYILHKSFLTFAWETTVAAYG-----------RRDLHV-FTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQT-SSADSF-----DPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRL-----DLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTF 832
            +P TPV  +  +I     I      +P  ++ +Y   C  +S P  D L R+   G   Q      R+++EA+     ++ + RY R  + +Y+  ME IL+ E +RL      FS  +L+N I + S L  A E  +  YG             + ++ F      F++  F+L K +++F    P + R ++ HL CC+ +I+E +AW+ DSPL  +++  SK+         R  QA+  E ++  AQ +    ++AD +      PKR+ +  S+   P       ++ +                        +LY+        L  FY+KV+ LA TR   L  RL     DLI+L   +W    + L   + L+ +RH+D +++C +YG+ KV++I L+F+ IV  Y  L + N  TF
Sbjct:  351 LPQTPVRTAMNTIQQLVMILNSASDKPSDKLISYFNNCHSKSYP--DVLERIEXFGSCFQ------RKFAEAVGQRCAEIGSQRY-RLGVRLYYRVMESILKSEEKRL--SVHNFSK-LLNNNIFNTSLLACALEVVLDTYGTSTNTSQSDCVNTETNLSFPWIINIFDLKAFDLYKVIESFIKAEPSLTRDMIKHLECCEHQIMESLAWQSDSPLFELIKQ-SKE---------RDGQADEPEPTNCIAQPLQHNHTAADLYLSPTKSPKRKASSTSACSPPDSQPAPINQSQ------------------------KLYKSTS-----LSLFYKKVYWLAYTRLSNLCFRLLSEHPDLIHL---IWTLFHHTLQNEYELMKDRHLDQIMMCSMYGICKVKNIDLRFKTIVAAYKELTNANQETF 722          
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A6J0VCQ9_9SAUR (retinoblastoma-associated protein n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0VCQ9_9SAUR)

HSP 1 Score: 111 bits (278), Expect = 3.360e-21
Identity = 99/351 (28.21%), Postives = 160/351 (45.58%), Query Frame = 0
Query:  497 RYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLHNYILHKSFLTFAWETTVAAYG-------------RRDLHVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRL--DLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTF 832
            +++EA+     ++   RY R  + +Y+  ME IL+ E +RL      FS  +L+N I H S L  + E  +A YG              RDL  F       N+  F+L K +++F    P + R ++ HL CC+ +I+E +AW+ DSPL  +L+  SK+         R  Q +  E ++  AQ +           +  H      ++P K          +KV    V              +++Y+        L  FY+KV+ LA TR   L  RL  D   L+  +W    + L   + L+ +RH+D +++C +YG+ KV++I L+F+ IV  Y  L  TN  TF
Sbjct:  424 KFAEAVGQGCAEIGLQRY-RLGVRLYYRVMESILKSEEKRL--SIHNFSK-LLNNKIFHTSLLACSLEVVMATYGTSRSASQLDNANMERDLS-FPWIINVLNLKAFDLYKVIESFIKAEPSLTREMIKHLECCEHQIMESLAWQSDSPLFELLKQ-SKE---------REGQVDEPEPTNYFAQPL-----------QHNHTAADLYLSPTKSPK-------KKVSSTPVYSXXXXXXXXXXXXQKIYKSTS-----LSLFYKKVYWLAYTRLNNLCLRLLPDHPELKHLIWTLFHHTLQNEYELMKDRHLDQIMMCAMYGICKVKNIDLRFKTIVTAYKELTSTNQETF 736          
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A7L0M2Z2_9PSIT (RB protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L0M2Z2_9PSIT)

HSP 1 Score: 110 bits (274), Expect = 4.880e-21
Identity = 106/397 (26.70%), Postives = 187/397 (47.10%), Query Frame = 0
Query:  449 ISERREKRPETRIETYLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLHNYILHKSFLTFAWETTVAAYGRRDLHV----------FTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQTSSADSF-DPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRL--DLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTF 832
            ++   +K  ET I+ +  C +   P    L+RV       +      ++++EA+     ++   RYK   + +Y+  ME +L+ E  RL  Q     S +L+  I H S L  A E  +A YGR               F      F++  F+  K +++F  + P + R ++ HL  C+ RI+E +AW+  SPL  +++  SK+R    EQ         E TS     + +  ++AD +  P R   +++ P++     GT + +       G+  V  TP   + ++P++        +  L  FY+KV+ LA  R   L  RL  D  +L   +W   ++ L   + L+ +RH+D +++C +YG+ KV+++ L+F+ IV  Y  L +TN  TF
Sbjct:   77 LNSATDKPSETLIKYFNNCTVN--PKDSILKRVENFDHIFK------KKFAEAVGQGCAEIGAQRYKL-GVRLYYRVMESMLKSEEERLSVQN---FSKLLNGNIFHTSLLACAVEVVMATYGRNASQSDGTSAETDVSFPWILSVFDLKAFDFYKVIESFIRVEPSLTREMIKHLERCEHRIMESLAWQSGSPLFDLIKQ-SKEREGQTEQP--------EPTSTLSLPLQHNHTAADLYLSPVRSPKKKAPPLS-----GTSTSD-------GQPGV--TP---QTQKPQK--------STSLSLFYKKVYLLAYLRLRTLFFRLLSDHPDLEPLIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETF 427          
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A672U566_STRHB (RB transcriptional corepressor 1 n=19 Tax=Neognathae TaxID=8825 RepID=A0A672U566_STRHB)

HSP 1 Score: 110 bits (274), Expect = 9.960e-21
Identity = 111/417 (26.62%), Postives = 196/417 (47.00%), Query Frame = 0
Query:  434 VPLTPVTDSSRSITWI----SERREKRPETRIETYLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLHNYILHKSFLTFAWETTVAAYGRR-----------DLHVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQTSSADSF-DPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRL--DLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTF 832
            +P TPV  +  +I  +    +   +K  +T I+ +  C +   P    L+RV       +      ++++EA+     ++ + RYK   + +Y+  ME +L+ E  RL  Q     S +L++ I H S L  A E  +A YGR            DL  F      F++  F+  K +++F    P + R ++ HL  C+ RI+E +AW+  SPL  +++  SK+R    EQ         E TS  +  + +  ++AD +  P R   ++  P++     GT + +    V         TP   + ++P++        +  L  FY+KV+ LA  R   L  RL  D  +L   +W   ++ L   + L+ +RH+D +++C +YG+ KV+++ L+F+ IV  Y  L +TN  TF
Sbjct:  357 LPQTPVRAAMNNIQQLIMILNSAADKPSDTLIKYFNNCTVN--PKDSILKRVENLDHIFK------KKFAEAVGQGCAEIGSQRYKL-GVRLYYRVMESMLKSEEERLSVQN---FSKLLNDNIFHTSLLACAVEVVMATYGRNASQSDGASAETDLS-FPWILNVFDLKAFDFYKVIESFIKAEPSLTREMIKHLERCEHRIMESLAWQSGSPLFDLIKQ-SKEREGQTEQP--------EPTSTLNLPLQHNHTAADLYLSPVRSPKKKGPPLS-----GTSTSDAQPGV---------TP---QTQKPQK--------STSLSLFYKKVYLLAYLRLRTLFFRLLSDHPDLEPLIWTLFQHTLQNEYELMRDRHLDQIMMCCMYGICKVKNVDLRFKIIVSAYKELPNTNQETF 726          
BLAST of Gvermi12420.t1 vs. uniprot
Match: A0A8D0KMR8_9SAUR (RB transcriptional corepressor 1 n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0KMR8_9SAUR)

HSP 1 Score: 108 bits (269), Expect = 3.950e-20
Identity = 113/429 (26.34%), Postives = 191/429 (44.52%), Query Frame = 0
Query:  428 TPPSSNV------PLTPVTDSSRSITWI----SERREKRPETRIETYLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSEALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLHNYILHKSFLTFAWETTVAAYGRR-------DLHVFTVA-----YRAFNVSPFELTKALDAFCTLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQTVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGTFSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVFALAGTRTEELLRRL--DLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCVIYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTF 832
            TP  SN+      P TPV  +  +I  +    +   +K  +  +  +  C +   PT   L RV   G   +       +++EA+     ++ + RY R  + +Y+  ME IL+ E +RL      FS  +L+N   H S L  A E  +A YG          L+  TV          N+  F+L K +++F    P + R ++ HL CC+ RI+E +AW+ DSPL  +++  SK+         R  Q+E  E +   AQ +           +  H+     ++P K         P+K +   +    +   + + + ++ Y+        L  FY+KV  LA  R + L  RL  D   L   +W    + L   + L+ +RH+D +++C +YG+ KV++I L+F+ IV  Y  L + N  TF
Sbjct:  352 TPTKSNLDEDSLLPQTPVRAAMNTIQQLMIILNSASDKPSDNLVSYFNNCTMN--PTQGILERVENLGCIFR------EKFAEAVGQGCAEIGSQRY-RLGVRLYYRVMESILKSEEKRL--SIHNFSK-LLNNNAFHTSLLACALEVVIATYGTSRSASQNDSLNTETVLSFPWIINTLNLKAFDLYKVIESFIKAEPNLSREMIKHLECCEHRIMESLAWKSDSPLFELIKQ-SKE---------RDGQSEQLEHASNFAQPL-----------QHNHSAAELYISPTKS--------PKKRVPSSLACPPSDS-QSVNQAQKPYKSTS-----LSLFYKKVHWLAYMRLKNLCLRLLSDHPELEHMIWTLFHHTLQNEYELMKDRHLDQIMMCSMYGMCKVKNIDLRFKTIVTAYKELTNANQETF 733          
The following BLAST results are available for this feature:
BLAST of Gvermi12420.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIT0_9FLOR1.680e-21758.72Retinoblastoma-associated protein n=1 Tax=Gracilar... [more]
A0A2V3IIU5_9FLOR1.260e-10349.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJ10_CHOCR2.200e-7832.06Similar to Retinoblastoma-associated protein n=1 T... [more]
A0A7S3A3H1_9RHOD9.860e-4828.08Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BJ67_9RHOD3.100e-3828.46Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
UPI001C4AA3A91.620e-2227.00LOW QUALITY PROTEIN: retinoblastoma-associated pro... [more]
A0A6J0VCQ9_9SAUR3.360e-2128.21retinoblastoma-associated protein n=1 Tax=Pogona v... [more]
A0A7L0M2Z2_9PSIT4.880e-2126.70RB protein (Fragment) n=4 Tax=Neognathae TaxID=882... [more]
A0A672U566_STRHB9.960e-2126.62RB transcriptional corepressor 1 n=19 Tax=Neognath... [more]
A0A8D0KMR8_9SAUR3.950e-2026.34RB transcriptional corepressor 1 n=2 Tax=Salvator ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002720Retinoblastoma-associated protein, A-boxSMARTSM01368RB_A_2coord: 437..637
e-value: 1.2E-8
score: 37.3
IPR002720Retinoblastoma-associated protein, A-boxPFAMPF01858RB_Acoord: 437..635
e-value: 2.9E-22
score: 79.5
IPR002719Retinoblastoma-associated protein, B-boxPFAMPF01857RB_Bcoord: 742..887
e-value: 4.7E-24
score: 84.9
NoneNo IPR availableGENE3D1.10.472.10coord: 446..627
e-value: 5.2E-20
score: 74.0
NoneNo IPR availableGENE3D1.10.472.10coord: 722..899
e-value: 4.7E-33
score: 116.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1062..1090
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 650..677
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1072..1090
IPR028309Retinoblastoma protein familyPANTHERPTHR13742RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATEDcoord: 245..1045
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 499..639
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 743..891

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4662303..4665575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12420.t1Gvermi12420.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4662303..4665575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12420.t1 ID=Gvermi12420.t1|Name=Gvermi12420.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1091bp
MQTERPHQLPHSPSPDDCIDVLVHRLAFPARVANLARSIHDSAIPSPPDL
YSSACALYIASVAHRAHQIPQLPLSQLLDAANAQVRHVPEHILNAQTPQR
QTFNRSTPPSPPPASRAVRPSHTAFMVTAYVWRKLHFLIARRLLHHHPSA
PRLAWLLFIVAKASLSSPSHSGYTHVQAYHLLLACLMQSGLITADDPENA
IFRATCAVPSELHHYRRAVDTLLPPPIQQRLPFFPAPDAHLHTHLDAHCD
ALDHVYSQQLTAVDDLLVSDERIFLHAPQLAAVTAPPLSPSIRPQSSCNG
TPTPSHIPCAPPSSLPHPSSPTQSTSLPQPSSPPSTPLKRKRPLDEQSQS
ASITPRPRRRRRAADFAVTPSSARPPTPRRPRVRSTLLTPLSSPARFSRY
VSTHPDALEALATVAAVTPHCTTTLPPTPPSSNVPLTPVTDSSRSITWIS
ERREKRPETRIETYLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSE
ALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLH
NYILHKSFLTFAWETTVAAYGRRDLHVFTVAYRAFNVSPFELTKALDAFC
TLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQ
TVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGT
FSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVF
ALAGTRTEELLRRLDLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCV
IYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTFLSNSPAVFRNISLEDYGH
LLTEDATEDEELKMAGIKDKTGDIIRFYNEAFVPHMRDFILPMGEDLGSF
NTDGHDAGKLAEAVGEDKADDQGAEGLNDLARRASRREGQERKEMFEDLG
RKLLQSPMRIMRTRRSPVRIGSIVVSPMSPSTRNMVLSRQNSVRRSRTNG
VGSMTPGTRALFAFGESPMGSVAVIHRRRERRRYRPLSFDGPVADARSAA
VRREVREVIGRSGRVVESYDSGEGEWDEGSGTDEDEDMGM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002720RB_A
IPR002719RB_B
IPR028309RB_fam
IPR036915Cyclin-like_sf