Gvermi12207.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12207.t1
Unique NameGvermi12207.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length149
Homology
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BLAST of Gvermi12207.t1 vs. uniprot
Match: A0A2V3IQF0_9FLOR (AN1-type zinc finger protein 2A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQF0_9FLOR)

HSP 1 Score: 237 bits (604), Expect = 5.120e-76
Identity = 114/149 (76.51%), Postives = 133/149 (89.26%), Query Frame = 0 
Query:    1 LRKRHAPVQFLNTPSAPIGDTSIPPENRVSVAVFFPAAADIKPRFMVFNKRNTPGRIIDEIKRRVKGLPDPQGDRYYLYAYKAAGNGVNLLPYMTPIKDMSHLIQNGDCLILENGDSGLDHSWLATLQRLSKGHK-SRSSRSSDTCAVA 148
            LRKR   VQF+NTPS+PIGD+SIPPEN+++VAVFFPAA +IKPRFMVF+KRNTPGRIIDE+KR+VK LP PQGDRYYLY YKA GNGVNLLPY+TPIKDM HL+Q+GDCLILENGDSGLD +W+  LQ+L KG + S+SSRS+D CAVA
Sbjct:  154 LRKRR--VQFVNTPSSPIGDSSIPPENQLTVAVFFPAATEIKPRFMVFSKRNTPGRIIDELKRQVKDLPQPQGDRYYLYGYKAGGNGVNLLPYITPIKDMPHLVQSGDCLILENGDSGLDQAWITALQKLGKGQRASKSSRSADNCAVA 300
The following BLAST results are available for this feature:
BLAST of Gvermi12207.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQF0_9FLOR5.120e-7676.51AN1-type zinc finger protein 2A n=1 Tax=Gracilario... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3848825..3849271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12207.t1Gvermi12207.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3848825..3849271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12207.t1 ID=Gvermi12207.t1|Name=Gvermi12207.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=149bp
LRKRHAPVQFLNTPSAPIGDTSIPPENRVSVAVFFPAAADIKPRFMVFNK
RNTPGRIIDEIKRRVKGLPDPQGDRYYLYAYKAAGNGVNLLPYMTPIKDM
SHLIQNGDCLILENGDSGLDHSWLATLQRLSKGHKSRSSRSSDTCAVA*
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