Gvermi12408.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12408.t1
Unique NameGvermi12408.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length226
Homology
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A2V3J3Y6_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Y6_9FLOR)

HSP 1 Score: 281 bits (720), Expect = 6.070e-93
Identity = 136/181 (75.14%), Postives = 154/181 (85.08%), Query Frame = 0
Query:   12 PSPPHSPFCLRKRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLLRIIYAN 192
            P P  +PF +RKRIAVLGAR VGKSAV IQC Y RFEPEYMPTCED+FLWTT VDG  YEVTIVD DGQDEFP FG QYTIG+DGYILMFS+++E +F I+KRV+EKLL+TL+VLNRKGT ELPRILVGNQ+D    RRVSR+ AQ FADEN IPYYETSA T+ENV++VF R+LRII AN
Sbjct:   43 PPPSRTPFYVRKRIAVLGARAVGKSAVAIQCAYNRFEPEYMPTCEDAFLWTTVVDGTNYEVTIVDTDGQDEFPDFGHQYTIGVDGYILMFSLVNENSFYIIKRVHEKLLETLIVLNRKGTKELPRILVGNQLDVAHKRRVSRQAAQQFADENDIPYYETSAYTAENVREVFVRMLRIINAN 223          
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A2V3IJT9_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT9_9FLOR)

HSP 1 Score: 273 bits (698), Expect = 1.430e-89
Identity = 139/215 (64.65%), Postives = 162/215 (75.35%), Query Frame = 0
Query:   12 PSPPHSPFCLRKRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLLRIIYANQFG-FSDSPSKFPPQKSQPRLSRADHNSNACNVQ 225
            P P   PF +RKRIAVLGAR VGKSAV IQC   RFEPEYMPTCED+FLWTTTVDG +YEVTIVD DGQDEFP FG+QYTIG+DGYILMFS++ E +F I++RV+EKLL TL+VL+ KGTAELPRILVGNQ+D    RRVSR+ AQ FADE+GIPYYETSA T ENV +VF  LLRII  N       S ++  P   Q   +   +  N C++Q
Sbjct:   43 PPPSQKPFRVRKRIAVLGARAVGKSAVAIQCTDNRFEPEYMPTCEDAFLWTTTVDGTKYEVTIVDTDGQDEFPDFGEQYTIGVDGYILMFSLVDESSFHIIRRVHEKLLQTLVVLDPKGTAELPRILVGNQLDMAHTRRVSRQVAQEFADEHGIPYYETSAYTGENVNEVFATLLRIINTNLVNSHKPSENELRPSCEQRESTTTANAPNYCSIQ 257          
BLAST of Gvermi12408.t1 vs. uniprot
Match: R7QRP1_CHOCR (Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP1_CHOCR)

HSP 1 Score: 192 bits (487), Expect = 1.180e-57
Identity = 95/181 (52.49%), Postives = 125/181 (69.06%), Query Frame = 0
Query:   12 PSPPHSPFCLRKRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLLRIIYAN 192
            P P   PF + KRIAVLGARGVGKSA+ I+    RFEP YM T +D + W   V+  +Y+V+I+D DGQDE   FG +YT G+D Y+L+FSV  E +++++K+VNEKLL TL V  R GT+E+PR+LVGNQID    R+V  ++A  FA   GIPY ETSA TS+NV + F  +L +I  N
Sbjct:   35 PDPDDEPFYVFKRIAVLGARGVGKSALSIRVAQNRFEPNYMLTFQDMYQWRPVVNSVQYDVSILDTDGQDENSEFGMRYTTGVDAYVLVFSVRDESSYEVIKQVNEKLLVTLNVTERVGTSEVPRVLVGNQIDIAHQRQVPSQEAAKFASNEGIPYLETSAFTSQNVNEAFDSVLCMIQQN 215          
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A7S2ZWW8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWW8_9RHOD)

HSP 1 Score: 147 bits (371), Expect = 7.870e-41
Identity = 77/165 (46.67%), Postives = 108/165 (65.45%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLLR 187
            +++AV+G + VGKS+++++ I   FE  Y PT ED FL +T VDG  +   ++D+ GQD+   +G Q TIGI GY+++FSV    TF +++ VN+ LL +   L    T E+PR+LVGNQID    R+VS E+AQ  A E  IPY E SAL+ E +QDVF  LLR
Sbjct:   23 RKLAVIGPKCVGKSSIILRFIENTFEEGYTPTIEDLFLVSTNVDGTAFNCELLDSAGQDDVSTYGAQLTIGIRGYLIVFSVRDRETFDLIRPVNQNLLVS---LGGPATHEVPRVLVGNQIDAAGERKVSTEEAQALARELRIPYMECSALSGEGIQDVFHSLLR 184          
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A5J4YYB2_PORPP (GTP-binding protein Rheb-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYB2_PORPP)

HSP 1 Score: 139 bits (349), Expect = 1.580e-37
Identity = 71/173 (41.04%), Postives = 109/173 (63.01%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQ-HRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLLRIIYANQF 194
            +RIAVLGARGVGK+++  +     F+  Y+PT EDS+  T  ++  +Y   ++D  GQDE+  FG Q TIG+ G+ L+FSV    +F+++K +N+KLL TL      G + +PR+LVGNQ D ++  R VS  + + +A E G P+ E SA++ ENV + F  L+R++    F
Sbjct:   21 RRIAVLGARGVGKTSMSTRFCENTFDDMYLPTIEDSYQATIRINNQQYICEVLDTAGQDEYSIFGTQLTIGVHGFFLVFSVRDRTSFELLKTINDKLLVTL------GASSIPRVLVGNQSDSIETEREVSYAEGESYAREIGCPFVECSAMSGENVTEAFVTLIRVMDPQSF 187          
BLAST of Gvermi12408.t1 vs. uniprot
Match: M1UXT7_CYAM1 (Small GTP-binding protein of Ras family n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXT7_CYAM1)

HSP 1 Score: 134 bits (337), Expect = 2.220e-34
Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTV-DGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLL 186
            +RIAVLGARGVGKSA+ I+   G F   Y+PT ED++  T    DG  Y + IVD  GQDE+   G Q TIGIDGY+L++SV    +F++V+ + ++L+  L      G+ ++P ILVGNQID    R VS E+  H A+  G  + E SA T  NV +VF  LL
Sbjct:   49 RRIAVLGARGVGKSALTIRFCEGTFPESYLPTIEDTYQTTLRGRDGTVYALEIVDTAGQDEYSSLGAQATIGIDGYVLLYSVRDASSFEMVRYIFQRLVAIL------GSDQIPMILVGNQIDQALDREVSFEEGAHIAETIGAAFCECSARTGTNVAEVFRILL 207          
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A4Y2DKK8_ARAVE (GTP-binding protein Rheb n=5 Tax=Entelegynae TaxID=74971 RepID=A0A4Y2DKK8_ARAVE)

HSP 1 Score: 128 bits (321), Expect = 1.380e-33
Identity = 65/165 (39.39%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   22 RKRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLL 186
            +++IA++G R VGKS++ IQ +  RF   Y PT E++F  TT V+G  Y + +VD  GQDEF  F Q Y++ I GY+L++S+  E +F+IVK ++ +LLD        G  ++P +LVGN++D    R VS E+ +  A      + E SA  +E+V D+F R++
Sbjct:    5 QRKIAIMGYRSVGKSSLTIQYVEARFVDSYEPTIENTFTKTTKVNGQEYFIKLVDTAGQDEFSIFPQSYSMDIHGYVLVYSITSERSFEIVKSIHHRLLDM------TGKVQVPIVLVGNKVDLHMERAVSFEEGKRAAASMNAEFIEASAKHNESVADIFKRII 163          
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A4W6FVG1_LATCA (GTP-binding protein Rheb-like n=17 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A4W6FVG1_LATCA)

HSP 1 Score: 127 bits (318), Expect = 4.110e-33
Identity = 67/164 (40.85%), Postives = 103/164 (62.80%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLL 186
            ++IAVLG R VGKS++ IQ + G+F   Y PT E++F  T TV+G  Y + +VD  GQDE+  F Q YTI +DGYIL++SV    +F++V+ ++EKLLD +      G  ++P ILVGN+ D    R +S E+ +  A+     + E+SA  ++   +VF R++
Sbjct:    7 RKIAVLGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKTMTVNGQEYNLQLVDTAGQDEYSIFPQSYTIDVDGYILIYSVTSYKSFEVVRVIHEKLLDMV------GNVQVPIILVGNKKDLHMERVISFEEGKALAESWNAAFLESSAKENQTAVEVFRRMI 164          
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A2J7QI66_9NEOP (GTP-binding protein Rheb-like protein n=6 Tax=cellular organisms TaxID=131567 RepID=A0A2J7QI66_9NEOP)

HSP 1 Score: 126 bits (316), Expect = 7.740e-33
Identity = 68/172 (39.53%), Postives = 106/172 (61.63%), Query Frame = 0
Query:   22 RKRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVF-TRLLRIIYAN 192
            +++IA++G R VGKS++ IQ + G+F   Y PT E++F  +T V+G  YE+ +VD  GQDE+  F  QY++ I GY+L++S+    +F++V+ + +KLLD        G   +P +LVGN+ D    R +S E+ +  AD     + ETSA  +E+V D+F T LL I  AN
Sbjct:    5 QRKIAIMGYRSVGKSSLSIQFVEGQFVDSYDPTIENTFTKSTRVNGQEYELKLVDTAGQDEYSIFPAQYSMDIHGYVLVYSITSSKSFEVVQIIYDKLLDM------TGKVHVPIVLVGNKTDLHMERMISTEEGKRLADSWKAAFLETSAKQNESVADIFHTALLEIEKAN 170          
BLAST of Gvermi12408.t1 vs. uniprot
Match: A0A7R8Z1B4_HERIL (Hypothetical protein n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8Z1B4_HERIL)

HSP 1 Score: 125 bits (315), Expect = 1.090e-32
Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCIYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILMFSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRRVSREDAQHFADENGIPYYETSALTSENVQDVFTRLLRIIYAN 192
            +RIAV+G R VGKS++ IQ + G+F   Y PT E++F   T V+   YEV +VD  GQDE+  F  +Y++   GY+L++S+  + +F++VK + +KLLD +      G A +P +LVGN+ D  Q R VS E+ +  A+     + E SA  +E+V D+F +LL  I  N
Sbjct:    6 RRIAVMGYRSVGKSSLSIQFVEGQFVDSYDPTIENTFSKVTRVNSQDYEVKLVDTAGQDEYSIFPAEYSMDFHGYVLVYSITSQKSFEVVKIIYDKLLDVI------GNAHVPIVLVGNKTDLHQERAVSTEEGRKLAESWKASFLEASAKQNESVADIFHQLLLQIERN 169          
The following BLAST results are available for this feature:
BLAST of Gvermi12408.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3Y6_9FLOR6.070e-9375.14GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
A0A2V3IJT9_9FLOR1.430e-8964.65GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
R7QRP1_CHOCR1.180e-5752.49Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7... [more]
A0A7S2ZWW8_9RHOD7.870e-4146.67Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YYB2_PORPP1.580e-3741.04GTP-binding protein Rheb-like n=1 Tax=Porphyridium... [more]
M1UXT7_CYAM12.220e-3446.06Small GTP-binding protein of Ras family n=1 Tax=Cy... [more]
A0A4Y2DKK8_ARAVE1.380e-3339.39GTP-binding protein Rheb n=5 Tax=Entelegynae TaxID... [more]
A0A4W6FVG1_LATCA4.110e-3340.85GTP-binding protein Rheb-like n=17 Tax=Euacanthomo... [more]
A0A2J7QI66_9NEOP7.740e-3339.53GTP-binding protein Rheb-like protein n=6 Tax=cell... [more]
A0A7R8Z1B4_HERIL1.090e-3240.00Hypothetical protein n=1 Tax=Hermetia illucens Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 23..44
score: 32.08
coord: 167..189
score: 39.83
coord: 63..85
score: 26.7
coord: 46..62
score: 28.63
coord: 132..145
score: 38.06
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 24..192
e-value: 1.1E-11
score: 36.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 24..192
e-value: 7.8E-40
score: 148.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..225
NoneNo IPR availablePROSITEPS51419RABcoord: 13..223
score: 17.708675
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 25..192
e-value: 2.6E-4
score: -62.0
IPR001806Small GTPasePFAMPF00071Rascoord: 25..189
e-value: 3.1E-35
score: 121.2
IPR001806Small GTPasePROSITEPS51421RAScoord: 15..225
score: 16.826365
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 20..194
e-value: 2.8E-45
score: 155.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 24..203
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 23..183
e-value: 2.8E-18
score: 64.2
IPR020849Small GTPase, Ras-typePANTHERPTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYcoord: 24..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4623247..4623924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12408.t1Gvermi12408.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4623247..4623924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12408.t1 ID=Gvermi12408.t1|Name=Gvermi12408.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=226bp
MAQVDRPSSEPPSPPHSPFCLRKRIAVLGARGVGKSAVVIQCIYGRFEPE
YMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGQQYTIGIDGYILM
FSVLHEGTFQIVKRVNEKLLDTLLVLNRKGTAELPRILVGNQIDDLQHRR
VSREDAQHFADENGIPYYETSALTSENVQDVFTRLLRIIYANQFGFSDSP
SKFPPQKSQPRLSRADHNSNACNVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras-type