Gvermi12188.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12188.t1
Unique NameGvermi12188.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length503
Homology
BLAST of Gvermi12188.t1 vs. uniprot
Match: A0A2V3IYD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD1_9FLOR)

HSP 1 Score: 326 bits (836), Expect = 5.590e-103
Identity = 184/442 (41.63%), Postives = 260/442 (58.82%), Query Frame = 0
Query:   12 LLTDAPEPPWGFINITGEN--PGKYVFGSNTFKPDLQLLKAKWYERKIYPERWDEVILGYVSVLLITIFTEIVISFLKSVLPYICSCVNPKQTNKTYYWREVADGVHTLLSYRFLNLWKRYRSEQ------KFRSGKVVMTIIALG--IFFLDGYIIILTQPNQYRSDQYDYNLIGSHPIGTDIGLGKFLRRNARERPCVTPVFYNSNPTRNFSLSTCHTLNIREAHYEVNDTVDSVRIGSWFHEGGSDHLITFGNASIEVKARALIYGAEGGTWRLLFPVLHKNHTAITYYLHQLVFQNILQYGCDENSNPKSCEELFVRHRIEAKLVSKEIKLWIPGEKGIKRRRQVRGLETTLVVRIEQPWSTVFRSIGPLMTTELIEEVAGPGSYAHIATEEERNGIPGLIYLERRNVSVILLLLCFPSAVVLLSCIKIGWRKAEHSQ 443
            +LT  PE P+GF+ +  E+  PG+YV G ++F  +  + K     R +     +E +LG +S+ +I + TE++++FL             K+++      E A     +  Y  LN+ +  R E       + R   + +T+ A+G  I  +D   I LTQP+   S   DYNL G+HPI    GLGKFLRR A ERPCVTP+F NSNP RNFS+S C TL + +AH  V DTV++++ GSWFHEGG DH+ITFGNASI +K R  +YG E GT R+LF +L++++     YLH+LV   I++  C+ N   ++C+E+   HR E+  V++ + LW    KG KRR  V GLET L + I +PW TVF+ +GPL+TTE + EV GPGSY+HI TEE +  I GL+  E RN+ VI +LL     V  L C +   R    SQ
Sbjct:    7 ILTTIPEAPYGFVEVLPESQVPGQYVVGQSSFTGNPDIKKPFLLIRNVGGSA-EEFMLGLLSIFMIMVVTELLLTFLSR-----------KRSDIDDEENEYAYAAVRVDEYLRLNMERALRREGWPRRVGQRRKVHLTVTVFAVGAVILLIDTGTIFLTQPSISVSKPGDYNLKGTHPIAASPGLGKFLRRTAIERPCVTPIFSNSNPLRNFSMSACTTLGLEQAHTRVTDTVNTIKFGSWFHEGGGDHIITFGNASITMKTRLFLYGVENGTRRILFSMLYEDYLPAIRYLHELVMYGIMEESCNANYATRTCDEVLKEHRSESTPVNRTLVLWTT-RKG-KRRESVLGLETNLFLEIRKPWVTVFKRVGPLLTTEQVTEVEGPGSYSHINTEERQENIRGLLVQESRNLGVIGMLLADSVLVAFLVCARRYCRPVSLSQ 434          
BLAST of Gvermi12188.t1 vs. uniprot
Match: A0A2V3IZE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZE0_9FLOR)

HSP 1 Score: 286 bits (731), Expect = 8.010e-88
Identity = 159/432 (36.81%), Postives = 244/432 (56.48%), Query Frame = 0
Query:   12 LLTDAPEPPWGFINITGEN--PGKYVFGSNTFKPDLQLLKAKWYERKIYPERWDEVILGYVSVLLITIFTEIVISFLKSVLPYICSCVNPKQTNKTYYWREVADGVHTLLSYRFLNLWKRYRSEQK------FRSGKV----VMTIIALGIFFLDGYIIILTQPNQYRSDQYDYNLIGSHPIGTDIGLGKFLRRNARERPCVTPVFYNSNPTRNFSLSTCHTLNIREAHYEVNDTVDSVRIGSWFHEGGSDHLITFGNASIEVKARALIYGAEGGTWRLLFPVLHKNHTAITYYLHQLVFQNILQYGCDENSNPKSCEELFVRHRIEAKLVSKEIKLWIPGEKGIKRRRQVRGLETTLVVRIEQPWSTVFRSIGPLMTTELIEEVAGPGSYAHIATEEERNGIPGLIYLERRNVSVILLLLCFPSAVVLLSC 431
            +LT  PEPP  F+ +  E+  PG+YV G ++F  +  + +  +  +K+     +  ++G +S  +IT+ T++V++ L          ++ ++    Y    V +         FL   +R    +K      +R  K     ++ +I++ IF +D   IILTQP    S   DYNL G+HPI  D   G+  R+   E PC+TPVF +SNP+RNFS+S C    + EAH  V DTV+++RIGSWFHEGG DH++TFGNA+I +K R  +YG E GT R+LF +L++++     YLH+LV   I++  C      ++C+E+   HR E+   ++ + LW    KG KR+  V GLE+ L + I QPW+TVFR++GPL+T E + EV GPGSY+HI+TE     + GL+  E R + +  L+L        L C
Sbjct:    7 VLTTIPEPPPKFVQVLPESQLPGQYVIGQSSFTSNPDINRPFFLVQKVGGSAAEAFVVGLLSTWMITVITKLVLTCLSRE-----RSIDDEENEYAYAAVRVDE---------FLRKSRREALRRKGWPRGVYRKKKACLIQMVLVISVVIFLIDICTIILTQPRISVSKPGDYNLKGTHPIAADREEGEEFRKTVIETPCITPVFSSSNPSRNFSISACTIFGLEEAHTRVTDTVNTIRIGSWFHEGGGDHIVTFGNATIRIKTRLFLYGVENGTRRILFSMLYEDYLPAIKYLHELVMYGIMEESCTAKYATRTCDEVLKEHRSESTPANRTVVLWTT-RKG-KRKETVVGLESNLFLEISQPWATVFRNVGPLLTGEQVTEVDGPGSYSHISTENREQNLHGLLVQETRYLGMFGLILADSVLSAFLIC 422          
BLAST of Gvermi12188.t1 vs. uniprot
Match: A0A2V3IY15_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY15_9FLOR)

HSP 1 Score: 261 bits (666), Expect = 1.560e-77
Identity = 129/304 (42.43%), Postives = 188/304 (61.84%), Query Frame = 0
Query:  131 RSEQKFRSGKVVMTIIALGI--FFLDGYIIILTQPNQYRSDQYDYNLIGSHPIGTDIGLGKFLRRNARERPCVTPVFYNSNPTRNFSLSTCHTLNIREAHYEVNDTVDSVRIGSWFHEGGSDHLITFGNASIEVKARALIYGAEGGTWRLLFPVLHKNHTAITYYLHQLVFQNILQYGCDENSNPKSCEELFVRHRIEAKLVSKEIKLWIPGEKGIKRRRQVRGLETTLVVRIEQPWSTVFRSIGPLMTTELIEEVAGPGSYAHIATEEERNGIPGLIYLERRNVSVILLLLCFPSAVVLLSCI 432
            RS +  +   +++T++A+GI  F ++   I+ TQP    S   DYNL G+HPI    G  KFLRR  RERPC+TPVF +SNP+RNFS+S C    + EAH    DTV++++IGSWFHEGG DH+ITFGNA I +K + L+YG  GGT RLLF +L++++     YLH+LV   I++  C      ++C+E+   HR E+   ++ + +W   ++  KR+  V GLET L + I +PW TVF+ +GPL+T E + EV GPG Y+H  T E    + GL+  E R + V  + L     + +L C+
Sbjct:   44 RSVEPRQKPYLLVTVLAMGILMFVMNAVAILCTQPRISVSKPGDYNLKGTHPIAAGHGNAKFLRRIGRERPCITPVFSSSNPSRNFSISACTIFGLEEAHTRDTDTVNTIKIGSWFHEGGGDHIITFGNARITIKTKLLLYGVAGGTRRLLFSMLYEDYLPAVRYLHELVMYGIMEETCTAKYATRTCDEVLKEHRSESTPTNRTVVVWTTRKE--KRKETVVGLETNLFLEINKPWVTVFKRVGPLLTAEQVTEVKGPGCYSHTETGEREQNLHGLLVQETRFLGVFGMTLADVVLLGVLLCL 345          
The following BLAST results are available for this feature:
BLAST of Gvermi12188.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYD1_9FLOR5.590e-10341.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IZE0_9FLOR8.010e-8836.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY15_9FLOR1.560e-7742.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..502
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..414
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 415..436
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 437..502
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..64
NoneNo IPR availableTMHMMTMhelixcoord: 413..432
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 65..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3785082..3786590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12188.t1Gvermi12188.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3785082..3786590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12188.t1 ID=Gvermi12188.t1|Name=Gvermi12188.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=503bp
MSANLSFPTALLLTDAPEPPWGFINITGENPGKYVFGSNTFKPDLQLLKA
KWYERKIYPERWDEVILGYVSVLLITIFTEIVISFLKSVLPYICSCVNPK
QTNKTYYWREVADGVHTLLSYRFLNLWKRYRSEQKFRSGKVVMTIIALGI
FFLDGYIIILTQPNQYRSDQYDYNLIGSHPIGTDIGLGKFLRRNARERPC
VTPVFYNSNPTRNFSLSTCHTLNIREAHYEVNDTVDSVRIGSWFHEGGSD
HLITFGNASIEVKARALIYGAEGGTWRLLFPVLHKNHTAITYYLHQLVFQ
NILQYGCDENSNPKSCEELFVRHRIEAKLVSKEIKLWIPGEKGIKRRRQV
RGLETTLVVRIEQPWSTVFRSIGPLMTTELIEEVAGPGSYAHIATEEERN
GIPGLIYLERRNVSVILLLLCFPSAVVLLSCIKIGWRKAEHSQGSGKSDL
EVFSSGDMTPMTSSKNVDDKKDVTSANSPELQSVVCSQDSNSHGTRSDSS
EN*
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