Gvermi12235.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gvermi12235.t1
Unique Name	Gvermi12235.t1
Type	mRNA
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	1670

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:3936024..3941033 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	72019.SARC_03377T0
Preferred name	PARP3
PFAMs	PARP,PARP_reg,WGR
Max annot lvl	33154\|Opisthokonta
KEGG ko	ko:K10798
KEGG Pathway	ko03410,ko04210,ko04212,ko04214,ko04217,map03410,map04210,map04212,map04214,map04217
KEGG Module	M00296
GOs	GO:0000723,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005814,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006302,GO:0006464,GO:0006471,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0015630,GO:0016043,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0019219,GO:0019222,GO:0019538,GO:0022616,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0032200,GO:0032886,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034502,GO:0034613,GO:0034641,GO:0034645,GO:0035861,GO:0036211,GO:0042592,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051103,GO:0051105,GO:0051106,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051338,GO:0051348,GO:0051493,GO:0051641,GO:0051716,GO:0051726,GO:0051972,GO:0051974,GO:0060236,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070507,GO:0070727,GO:0071704,GO:0071840,GO:0080090,GO:0090224,GO:0090304,GO:0090734,GO:0140097,GO:1901360,GO:1901564,GO:1901576,GO:1905661,GO:1905662,GO:1990166,GO:2000112,GO:2000113,GO:2000278,GO:2000279
Evalue	2.26e-78
EggNOG OGs	KOG1037@1\|root,KOG1037@2759\|Eukaryota,38E97@33154\|Opisthokonta
EC	2.4.2.30
Description	Proposed nucleic acid binding domain
COG category	KLO
BRITE	ko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03400

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12235	Gvermi12235	Gracilaria vermiculophylla HapMaleFtJ_2017 male	gene	ScGOVlb_3404 3936024..3941033 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12235.t1.start1	Gvermi12235.t1.start1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	start_codon	ScGOVlb_3404 3936024..3936026 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12235.t1.CDS1	Gvermi12235.t1.CDS1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	CDS	ScGOVlb_3404 3936024..3941033 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12235.t1.exon1	Gvermi12235.t1.exon1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	exon	ScGOVlb_3404 3936024..3941033 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12235.t1.stop1	Gvermi12235.t1.stop1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	stop_codon	ScGOVlb_3404 3941031..3941033 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12235.t1	Gvermi12235.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	polypeptide	ScGOVlb_3404 3936024..3941033 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at ScGOVlb_3404:3936024..3941033+
coding sequence from alignment at ScGOVlb_3404:3936024..3941033+

mRNA sequence

>Gvermi12235.t1 ID=Gvermi12235.t1|Name=Gvermi12235.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1670bp
MTVPDLTTPRRLLRRSHFWQVHLRNTVVVTRHGKGVGLHGGRETVRQFPD
AQKASKWAHDAFNSKMADGYLPPEQFRDTQTAEALQVFHKPNPDVTSRAE
NPEKPQSLADSHSTQLSINPKQSKQPEQIHVTITPGRHNQTADAKSSVQS
QNLNTPHNNGEVSHEKQANKPEQPRREEQLKLSTQPMSNEHPKESKQPES
LPLEKQQSKSSERETQTDQRKQKGHEKPNKPSIFISRDQDMKSVQNRPSA
QVANEKATNTHGKPGEHGKPGQHVKPGQHVKPGQHTKPGEPDKPGEHIKL
GEHTKPGEHVKPGEYVKPGKHVKPGKHVKPGEHVKPGEHVKPGEHVKLGE
HDKLGGHVKLGEHGDLGEHVKPGEHDKPGKHVNPGKHVKPGEHVKPGEHD
KPGELGKSGKHGKPDKHVKPGEHGKPGKHVKPGEHDKPGKHVKPGEHDKP
GEHDKPGKHVKPGEHDKPDKHVKPGKHVKAVEVEHGKSGEHGKLDEHVKL
DEHGKLGEHGKPGKHVKLGKHVKLGEHCKLGAHVKSGEHVKSGEHVKLGE
HGKSSEQLKASEQGKLSAHRKLGAQGNPIERGKPSEQDSPSDKLSKHDIL
CEKPNNQGKRIKRDTPRGKLNDQGKPADQNTPSERDKPNEQGKSTKQNTS
SEKDKPIEQDKSNDSDRSRGYGTLGEHRKPHEQAEKHRQGKLPKQPRKLE
QTKQSEKSAQLMRIERAEQPQPAQQLGAHRQTVQSDNLKPSAAVRSEQKS
PSKGDARQHPSIGSALVRRSARKRSAPAPYVAESASRPRPRRRLSEPLPP
KGPSSPVLKTPSKVLNEKDSSKIAEVRRAINTDSPSPRATPLMTTPREGP
QSKSKRRGVKRTGRGRPQGVGKSSAVKKHKCPSKIFPSVPENSSLGVVDQ
SSGVDDGVIYTEKSISGETIVFDVLLVYIDKHTHTDKFIVLQLIHDPNSE
SPYVLFEKIGRTGSEGQSLRIDFATNGLHEAREEFDRRFHDYTGLPWTSR
DAAPIPGKYRFARQDYELKFKVLFLADPHWQYWVDEGDIRKPKKWLDYNE
EDSMLAEELQMEYSSNPWLSERIVQNGSHFDLVNLETMTTTEVGHPNSSV
HHFRRATASDIPKSKHSNHENQPSSVISANQATSIQSSRNSTGMNKPAPL
QPHVSQLVSQSRSQALAGVPFVRRTAEAGSELPTVSNVPNIASGAPSLFP
VPPLAHSTVISQALLAPATMLPQPSAQTLPVNPLMHPIPGTIRSVPVSLP
APQFGVPNHTYNGSIPASIDSSLVQRNLLGGVESGLLPLDGRSKLVGETE
PLLMSLAMQQQGSPYLQSTLPNPTKALINILFDNETHVGSLKRFGIDVRL
LPLNHLTAKQIQQGISVLEEIEEALTRGTNMPRLDLEQLSAKFYAVLPRN
YDNRRPPVILSIELLQQCYDMCIVLFHMVHAMSILSSARAKIGPLGGQKY
LLTLPEQLYSLLNVDLSLVVPGSEEHLIISEAFHQTKGAFIGSELLSVWR
VDRHGDVERFSRLNLVNHALLWSGCHIGSVPSILMNGLQIVGHSGGRLGK
GIYCASESGKSLQSTVPESRSQVGCMFLVEAALGRSYEVFEDQNFLLSPP
HGFNSLRACGRRAPAGYKNVRLDNVPVSIAVMGAQPQMNAAQSSFSQDEF
VVYDEAQVRLRYLVTVKKK*

spliced messenger RNA

>Gvermi12235.t1 ID=Gvermi12235.t1|Name=Gvermi12235.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=5010bp|location=Sequence derived from alignment at ScGOVlb_3404:3936024..3941033+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACCGTGCCGGACCTTACCACTCCGCGCCGTCTGTTGCGCCGCTCTCA
TTTCTGGCAAGTGCACCTACGCAATACCGTCGTCGTCACCCGTCACGGCA
AGGGCGTCGGCCTCCACGGCGGCAGAGAGACCGTGCGACAGTTCCCCGAC
GCTCAGAAAGCCTCCAAGTGGGCCCACGACGCCTTCAACTCAAAAATGGC
AGATGGATATCTGCCACCTGAACAGTTTCGCGACACGCAAACTGCAGAAG
CGCTTCAGGTCTTTCACAAACCAAATCCTGATGTCACAAGCCGCGCCGAA
AACCCCGAAAAGCCTCAATCGCTGGCGGATTCTCACTCCACGCAGCTCTC
CATTAACCCAAAACAGTCCAAGCAGCCGGAGCAGATACACGTTACCATCA
CACCTGGGCGCCATAACCAAACCGCTGATGCGAAATCATCGGTACAATCC
CAAAATCTGAACACTCCTCACAACAACGGAGAGGTGAGCCACGAAAAACA
GGCCAACAAACCCGAACAACCTAGACGGGAAGAGCAATTGAAGCTTAGCA
CGCAGCCCATGTCCAACGAACACCCCAAAGAAAGCAAACAACCCGAGTCG
CTTCCTCTGGAAAAGCAGCAATCGAAGTCCAGTGAGCGGGAAACCCAGAC
GGATCAAAGAAAGCAAAAAGGGCATGAAAAGCCGAACAAACCGAGTATAT
TCATATCCCGCGATCAAGACATGAAGAGCGTTCAAAACAGACCGAGCGCA
CAAGTTGCAAACGAGAAAGCAACGAACACGCATGGCAAACCGGGCGAGCA
CGGCAAACCGGGCCAGCACGTCAAACCGGGCCAGCACGTCAAACCGGGCC
AGCACACCAAACCGGGCGAGCCCGACAAACCGGGCGAGCACATCAAACTG
GGCGAGCACACCAAACCGGGCGAGCACGTCAAACCGGGCGAGTACGTCAA
ACCGGGCAAGCACGTCAAACCGGGCAAGCACGTCAAACCGGGCGAGCACG
TCAAACCGGGCGAGCACGTCAAACCGGGCGAGCACGTCAAACTCGGCGAG
CACGACAAACTGGGCGGACACGTCAAACTCGGCGAGCACGGCGACTTGGG
CGAGCACGTCAAACCGGGCGAGCACGACAAACCCGGCAAGCACGTCAACC
CGGGCAAGCACGTCAAACCGGGCGAGCACGTCAAACCGGGCGAGCACGAC
AAACCAGGCGAGCTCGGCAAATCGGGCAAGCACGGCAAACCGGACAAGCA
CGTCAAACCGGGCGAGCACGGCAAACCCGGCAAACACGTCAAACCGGGCG
AGCACGACAAACCGGGCAAGCACGTCAAACCGGGCGAGCACGACAAACCG
GGCGAGCACGACAAACCGGGCAAGCACGTCAAACCGGGCGAGCACGACAA
ACCGGACAAGCACGTCAAACCGGGCAAGCACGTCAAAGCAGTCGAAGTCG
AGCACGGCAAATCGGGCGAGCACGGCAAACTGGACGAGCACGTCAAACTG
GACGAGCACGGCAAACTGGGCGAGCACGGCAAACCGGGCAAGCACGTCAA
ATTGGGCAAGCACGTCAAACTGGGCGAGCACTGCAAACTGGGCGCGCACG
TCAAATCGGGCGAGCACGTCAAATCGGGCGAGCACGTCAAATTGGGCGAG
CACGGCAAGTCAAGCGAGCAGCTCAAAGCTAGCGAGCAAGGCAAACTGAG
TGCCCATCGCAAATTGGGTGCGCAAGGCAACCCGATCGAGAGAGGCAAAC
CCAGCGAGCAGGACTCACCGAGCGACAAATTGAGCAAGCATGACATACTT
TGCGAGAAACCAAACAACCAGGGCAAACGGATCAAACGGGACACACCAAG
AGGAAAACTGAACGACCAAGGCAAACCAGCCGATCAAAATACACCGAGTG
AGAGAGACAAACCAAATGAGCAAGGCAAATCGACCAAACAAAATACATCC
AGCGAGAAGGACAAACCGATCGAGCAAGATAAGTCGAACGACAGCGATAG
ATCGAGGGGTTATGGCACCCTGGGTGAACATCGGAAGCCGCATGAACAAG
CCGAAAAGCATAGACAAGGAAAGCTTCCTAAGCAACCCAGAAAACTTGAA
CAGACGAAACAATCCGAAAAGTCTGCGCAGCTGATGCGAATCGAACGAGC
GGAGCAGCCACAACCCGCGCAACAGCTAGGAGCACATAGACAGACCGTGC
AGTCTGATAATCTCAAACCTTCGGCCGCGGTTCGATCCGAACAAAAGAGT
CCATCCAAAGGCGACGCACGACAGCATCCTTCCATAGGATCCGCATTGGT
CCGTCGATCTGCCCGTAAGCGCTCCGCCCCTGCACCCTACGTCGCAGAGT
CAGCATCCCGCCCGCGCCCTCGTCGACGACTATCTGAACCTCTTCCACCC
AAAGGTCCTTCCTCTCCCGTGCTTAAGACTCCTTCGAAAGTCCTCAATGA
GAAAGACTCTTCTAAAATTGCTGAGGTGCGCAGAGCCATCAACACCGATT
CTCCAAGTCCAAGAGCGACCCCTCTCATGACCACACCTCGGGAAGGTCCT
CAAAGCAAATCTAAAAGGCGGGGTGTAAAGCGAACTGGCAGAGGTCGCCC
GCAGGGAGTCGGCAAAAGTTCTGCCGTCAAGAAGCACAAGTGCCCATCAA
AAATTTTTCCTTCCGTTCCGGAAAATAGTTCTCTTGGCGTAGTTGATCAA
TCGAGCGGTGTCGATGATGGTGTTATCTACACAGAAAAATCAATTTCTGG
AGAGACCATTGTTTTCGATGTGTTGTTGGTCTATATTGACAAACACACTC
ACACGGACAAGTTCATCGTTTTGCAACTGATACATGATCCCAATTCCGAA
TCACCGTATGTCTTGTTCGAAAAAATTGGGCGTACAGGTTCCGAAGGCCA
ATCTCTGCGAATTGATTTTGCGACAAATGGTTTACACGAGGCGAGAGAAG
AGTTTGATCGGCGCTTTCACGATTACACAGGGTTACCTTGGACATCGCGT
GACGCAGCTCCGATTCCTGGCAAATATAGATTCGCCAGACAAGATTATGA
ACTCAAATTCAAAGTGTTGTTCCTGGCTGACCCTCATTGGCAGTATTGGG
TGGACGAAGGTGATATCAGAAAGCCTAAGAAATGGTTAGATTACAACGAA
GAAGACAGTATGCTTGCTGAAGAGCTTCAAATGGAGTACTCTTCCAACCC
TTGGCTTTCAGAACGAATAGTCCAGAACGGTTCTCACTTTGATCTCGTTA
ATTTGGAAACAATGACCACTACTGAGGTTGGCCATCCGAATAGCAGTGTT
CACCACTTTCGGAGAGCGACTGCAAGTGACATACCTAAATCTAAGCATAG
CAACCATGAGAACCAACCCAGCAGTGTGATTTCCGCGAATCAAGCGACCA
GCATCCAATCCTCAAGAAACAGCACTGGGATGAATAAGCCGGCCCCTCTG
CAACCTCATGTTTCGCAACTTGTAAGCCAGTCACGTTCTCAAGCACTAGC
AGGAGTCCCATTTGTACGGAGAACAGCCGAAGCAGGCTCAGAACTACCCA
CGGTTTCAAATGTTCCGAACATTGCTTCTGGTGCACCGTCACTTTTTCCT
GTTCCTCCTTTGGCCCATAGCACAGTCATATCTCAGGCGTTACTGGCGCC
AGCTACGATGCTGCCACAACCTTCTGCTCAAACTCTTCCCGTGAATCCCT
TAATGCATCCGATTCCCGGCACGATTCGATCGGTGCCTGTTTCCCTGCCT
GCTCCTCAATTCGGAGTCCCAAATCATACTTACAACGGGTCTATACCAGC
ATCTATCGATTCCTCGCTCGTCCAGAGAAATTTGCTTGGCGGTGTAGAGA
GCGGGCTTCTACCATTAGACGGTCGTTCAAAGCTGGTGGGTGAGACTGAA
CCATTGCTAATGAGTCTTGCAATGCAACAACAAGGTTCCCCATACCTACA
ATCCACCCTCCCAAATCCCACAAAAGCCCTTATTAACATCTTATTTGACA
ACGAGACGCACGTAGGCTCGTTAAAACGCTTTGGCATTGACGTTCGGTTA
CTGCCGCTCAACCATCTGACTGCAAAGCAAATTCAGCAAGGAATTTCCGT
TCTTGAAGAAATTGAAGAGGCTCTCACTCGTGGCACGAATATGCCGCGTT
TGGATTTGGAGCAATTGTCAGCAAAGTTTTATGCTGTGTTGCCACGTAAT
TACGACAACCGACGCCCCCCAGTTATTTTGAGCATCGAGTTGCTTCAGCA
ATGCTACGATATGTGCATTGTATTGTTTCATATGGTGCACGCGATGTCTA
TTCTGAGCTCGGCAAGGGCGAAGATAGGGCCTTTGGGAGGGCAAAAGTAT
TTACTCACCCTTCCTGAGCAATTGTACAGCCTGCTCAATGTGGACCTAAG
TCTAGTGGTACCTGGATCTGAAGAGCACTTGATTATATCTGAAGCGTTTC
ATCAGACAAAGGGGGCGTTCATTGGCTCAGAATTATTAAGCGTTTGGAGG
GTTGATCGACATGGCGACGTTGAACGTTTCTCGCGGTTGAACTTAGTGAA
TCATGCGTTGTTGTGGTCAGGATGTCACATTGGATCTGTGCCATCAATTC
TTATGAATGGGCTGCAAATTGTGGGACACAGTGGTGGTCGATTGGGGAAA
GGCATCTACTGTGCGTCTGAAAGTGGGAAAAGTCTACAGTCCACTGTTCC
CGAGAGTCGAAGTCAAGTCGGGTGCATGTTTCTCGTGGAAGCGGCGTTGG
GAAGGAGCTACGAAGTGTTTGAGGATCAAAATTTTTTACTGTCTCCTCCT
CACGGGTTCAATTCCTTGAGGGCTTGTGGAAGAAGAGCACCTGCTGGATA
TAAAAATGTGCGGTTGGATAACGTGCCAGTTAGCATTGCGGTGATGGGAG
CACAACCGCAGATGAACGCTGCGCAAAGCAGCTTCTCACAAGACGAATTC
GTCGTTTATGACGAAGCACAGGTTCGGCTACGATATCTAGTGACGGTGAA
GAAGAAGTAA

protein sequence of Gvermi12235.t1

>Gvermi12235.t1 ID=Gvermi12235.t1|Name=Gvermi12235.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1670bp
MTVPDLTTPRRLLRRSHFWQVHLRNTVVVTRHGKGVGLHGGRETVRQFPD
AQKASKWAHDAFNSKMADGYLPPEQFRDTQTAEALQVFHKPNPDVTSRAE
NPEKPQSLADSHSTQLSINPKQSKQPEQIHVTITPGRHNQTADAKSSVQS
QNLNTPHNNGEVSHEKQANKPEQPRREEQLKLSTQPMSNEHPKESKQPES
LPLEKQQSKSSERETQTDQRKQKGHEKPNKPSIFISRDQDMKSVQNRPSA
QVANEKATNTHGKPGEHGKPGQHVKPGQHVKPGQHTKPGEPDKPGEHIKL
GEHTKPGEHVKPGEYVKPGKHVKPGKHVKPGEHVKPGEHVKPGEHVKLGE
HDKLGGHVKLGEHGDLGEHVKPGEHDKPGKHVNPGKHVKPGEHVKPGEHD
KPGELGKSGKHGKPDKHVKPGEHGKPGKHVKPGEHDKPGKHVKPGEHDKP
GEHDKPGKHVKPGEHDKPDKHVKPGKHVKAVEVEHGKSGEHGKLDEHVKL
DEHGKLGEHGKPGKHVKLGKHVKLGEHCKLGAHVKSGEHVKSGEHVKLGE
HGKSSEQLKASEQGKLSAHRKLGAQGNPIERGKPSEQDSPSDKLSKHDIL
CEKPNNQGKRIKRDTPRGKLNDQGKPADQNTPSERDKPNEQGKSTKQNTS
SEKDKPIEQDKSNDSDRSRGYGTLGEHRKPHEQAEKHRQGKLPKQPRKLE
QTKQSEKSAQLMRIERAEQPQPAQQLGAHRQTVQSDNLKPSAAVRSEQKS
PSKGDARQHPSIGSALVRRSARKRSAPAPYVAESASRPRPRRRLSEPLPP
KGPSSPVLKTPSKVLNEKDSSKIAEVRRAINTDSPSPRATPLMTTPREGP
QSKSKRRGVKRTGRGRPQGVGKSSAVKKHKCPSKIFPSVPENSSLGVVDQ
SSGVDDGVIYTEKSISGETIVFDVLLVYIDKHTHTDKFIVLQLIHDPNSE
SPYVLFEKIGRTGSEGQSLRIDFATNGLHEAREEFDRRFHDYTGLPWTSR
DAAPIPGKYRFARQDYELKFKVLFLADPHWQYWVDEGDIRKPKKWLDYNE
EDSMLAEELQMEYSSNPWLSERIVQNGSHFDLVNLETMTTTEVGHPNSSV
HHFRRATASDIPKSKHSNHENQPSSVISANQATSIQSSRNSTGMNKPAPL
QPHVSQLVSQSRSQALAGVPFVRRTAEAGSELPTVSNVPNIASGAPSLFP
VPPLAHSTVISQALLAPATMLPQPSAQTLPVNPLMHPIPGTIRSVPVSLP
APQFGVPNHTYNGSIPASIDSSLVQRNLLGGVESGLLPLDGRSKLVGETE
PLLMSLAMQQQGSPYLQSTLPNPTKALINILFDNETHVGSLKRFGIDVRL
LPLNHLTAKQIQQGISVLEEIEEALTRGTNMPRLDLEQLSAKFYAVLPRN
YDNRRPPVILSIELLQQCYDMCIVLFHMVHAMSILSSARAKIGPLGGQKY
LLTLPEQLYSLLNVDLSLVVPGSEEHLIISEAFHQTKGAFIGSELLSVWR
VDRHGDVERFSRLNLVNHALLWSGCHIGSVPSILMNGLQIVGHSGGRLGK
GIYCASESGKSLQSTVPESRSQVGCMFLVEAALGRSYEVFEDQNFLLSPP
HGFNSLRACGRRAPAGYKNVRLDNVPVSIAVMGAQPQMNAAQSSFSQDEF
VVYDEAQVRLRYLVTVKKK*

mRNA from alignment at ScGOVlb_3404:3936024..3941033+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gvermi12235.t1 ID=Gvermi12235.t1|Name=Gvermi12235.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=5010bp|location=Sequence derived from alignment at ScGOVlb_3404:3936024..3941033+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGACCGTGCCGGACCTTACCACTCCGCGCCGTCTGTTGCGCCGCTCTCA
TTTCTGGCAAGTGCACCTACGCAATACCGTCGTCGTCACCCGTCACGGCA
AGGGCGTCGGCCTCCACGGCGGCAGAGAGACCGTGCGACAGTTCCCCGAC
GCTCAGAAAGCCTCCAAGTGGGCCCACGACGCCTTCAACTCAAAAATGGC
AGATGGATATCTGCCACCTGAACAGTTTCGCGACACGCAAACTGCAGAAG
CGCTTCAGGTCTTTCACAAACCAAATCCTGATGTCACAAGCCGCGCCGAA
AACCCCGAAAAGCCTCAATCGCTGGCGGATTCTCACTCCACGCAGCTCTC
CATTAACCCAAAACAGTCCAAGCAGCCGGAGCAGATACACGTTACCATCA
CACCTGGGCGCCATAACCAAACCGCTGATGCGAAATCATCGGTACAATCC
CAAAATCTGAACACTCCTCACAACAACGGAGAGGTGAGCCACGAAAAACA
GGCCAACAAACCCGAACAACCTAGACGGGAAGAGCAATTGAAGCTTAGCA
CGCAGCCCATGTCCAACGAACACCCCAAAGAAAGCAAACAACCCGAGTCG
CTTCCTCTGGAAAAGCAGCAATCGAAGTCCAGTGAGCGGGAAACCCAGAC
GGATCAAAGAAAGCAAAAAGGGCATGAAAAGCCGAACAAACCGAGTATAT
TCATATCCCGCGATCAAGACATGAAGAGCGTTCAAAACAGACCGAGCGCA
CAAGTTGCAAACGAGAAAGCAACGAACACGCATGGCAAACCGGGCGAGCA
CGGCAAACCGGGCCAGCACGTCAAACCGGGCCAGCACGTCAAACCGGGCC
AGCACACCAAACCGGGCGAGCCCGACAAACCGGGCGAGCACATCAAACTG
GGCGAGCACACCAAACCGGGCGAGCACGTCAAACCGGGCGAGTACGTCAA
ACCGGGCAAGCACGTCAAACCGGGCAAGCACGTCAAACCGGGCGAGCACG
TCAAACCGGGCGAGCACGTCAAACCGGGCGAGCACGTCAAACTCGGCGAG
CACGACAAACTGGGCGGACACGTCAAACTCGGCGAGCACGGCGACTTGGG
CGAGCACGTCAAACCGGGCGAGCACGACAAACCCGGCAAGCACGTCAACC
CGGGCAAGCACGTCAAACCGGGCGAGCACGTCAAACCGGGCGAGCACGAC
AAACCAGGCGAGCTCGGCAAATCGGGCAAGCACGGCAAACCGGACAAGCA
CGTCAAACCGGGCGAGCACGGCAAACCCGGCAAACACGTCAAACCGGGCG
AGCACGACAAACCGGGCAAGCACGTCAAACCGGGCGAGCACGACAAACCG
GGCGAGCACGACAAACCGGGCAAGCACGTCAAACCGGGCGAGCACGACAA
ACCGGACAAGCACGTCAAACCGGGCAAGCACGTCAAAGCAGTCGAAGTCG
AGCACGGCAAATCGGGCGAGCACGGCAAACTGGACGAGCACGTCAAACTG
GACGAGCACGGCAAACTGGGCGAGCACGGCAAACCGGGCAAGCACGTCAA
ATTGGGCAAGCACGTCAAACTGGGCGAGCACTGCAAACTGGGCGCGCACG
TCAAATCGGGCGAGCACGTCAAATCGGGCGAGCACGTCAAATTGGGCGAG
CACGGCAAGTCAAGCGAGCAGCTCAAAGCTAGCGAGCAAGGCAAACTGAG
TGCCCATCGCAAATTGGGTGCGCAAGGCAACCCGATCGAGAGAGGCAAAC
CCAGCGAGCAGGACTCACCGAGCGACAAATTGAGCAAGCATGACATACTT
TGCGAGAAACCAAACAACCAGGGCAAACGGATCAAACGGGACACACCAAG
AGGAAAACTGAACGACCAAGGCAAACCAGCCGATCAAAATACACCGAGTG
AGAGAGACAAACCAAATGAGCAAGGCAAATCGACCAAACAAAATACATCC
AGCGAGAAGGACAAACCGATCGAGCAAGATAAGTCGAACGACAGCGATAG
ATCGAGGGGTTATGGCACCCTGGGTGAACATCGGAAGCCGCATGAACAAG
CCGAAAAGCATAGACAAGGAAAGCTTCCTAAGCAACCCAGAAAACTTGAA
CAGACGAAACAATCCGAAAAGTCTGCGCAGCTGATGCGAATCGAACGAGC
GGAGCAGCCACAACCCGCGCAACAGCTAGGAGCACATAGACAGACCGTGC
AGTCTGATAATCTCAAACCTTCGGCCGCGGTTCGATCCGAACAAAAGAGT
CCATCCAAAGGCGACGCACGACAGCATCCTTCCATAGGATCCGCATTGGT
CCGTCGATCTGCCCGTAAGCGCTCCGCCCCTGCACCCTACGTCGCAGAGT
CAGCATCCCGCCCGCGCCCTCGTCGACGACTATCTGAACCTCTTCCACCC
AAAGGTCCTTCCTCTCCCGTGCTTAAGACTCCTTCGAAAGTCCTCAATGA
GAAAGACTCTTCTAAAATTGCTGAGGTGCGCAGAGCCATCAACACCGATT
CTCCAAGTCCAAGAGCGACCCCTCTCATGACCACACCTCGGGAAGGTCCT
CAAAGCAAATCTAAAAGGCGGGGTGTAAAGCGAACTGGCAGAGGTCGCCC
GCAGGGAGTCGGCAAAAGTTCTGCCGTCAAGAAGCACAAGTGCCCATCAA
AAATTTTTCCTTCCGTTCCGGAAAATAGTTCTCTTGGCGTAGTTGATCAA
TCGAGCGGTGTCGATGATGGTGTTATCTACACAGAAAAATCAATTTCTGG
AGAGACCATTGTTTTCGATGTGTTGTTGGTCTATATTGACAAACACACTC
ACACGGACAAGTTCATCGTTTTGCAACTGATACATGATCCCAATTCCGAA
TCACCGTATGTCTTGTTCGAAAAAATTGGGCGTACAGGTTCCGAAGGCCA
ATCTCTGCGAATTGATTTTGCGACAAATGGTTTACACGAGGCGAGAGAAG
AGTTTGATCGGCGCTTTCACGATTACACAGGGTTACCTTGGACATCGCGT
GACGCAGCTCCGATTCCTGGCAAATATAGATTCGCCAGACAAGATTATGA
ACTCAAATTCAAAGTGTTGTTCCTGGCTGACCCTCATTGGCAGTATTGGG
TGGACGAAGGTGATATCAGAAAGCCTAAGAAATGGTTAGATTACAACGAA
GAAGACAGTATGCTTGCTGAAGAGCTTCAAATGGAGTACTCTTCCAACCC
TTGGCTTTCAGAACGAATAGTCCAGAACGGTTCTCACTTTGATCTCGTTA
ATTTGGAAACAATGACCACTACTGAGGTTGGCCATCCGAATAGCAGTGTT
CACCACTTTCGGAGAGCGACTGCAAGTGACATACCTAAATCTAAGCATAG
CAACCATGAGAACCAACCCAGCAGTGTGATTTCCGCGAATCAAGCGACCA
GCATCCAATCCTCAAGAAACAGCACTGGGATGAATAAGCCGGCCCCTCTG
CAACCTCATGTTTCGCAACTTGTAAGCCAGTCACGTTCTCAAGCACTAGC
AGGAGTCCCATTTGTACGGAGAACAGCCGAAGCAGGCTCAGAACTACCCA
CGGTTTCAAATGTTCCGAACATTGCTTCTGGTGCACCGTCACTTTTTCCT
GTTCCTCCTTTGGCCCATAGCACAGTCATATCTCAGGCGTTACTGGCGCC
AGCTACGATGCTGCCACAACCTTCTGCTCAAACTCTTCCCGTGAATCCCT
TAATGCATCCGATTCCCGGCACGATTCGATCGGTGCCTGTTTCCCTGCCT
GCTCCTCAATTCGGAGTCCCAAATCATACTTACAACGGGTCTATACCAGC
ATCTATCGATTCCTCGCTCGTCCAGAGAAATTTGCTTGGCGGTGTAGAGA
GCGGGCTTCTACCATTAGACGGTCGTTCAAAGCTGGTGGGTGAGACTGAA
CCATTGCTAATGAGTCTTGCAATGCAACAACAAGGTTCCCCATACCTACA
ATCCACCCTCCCAAATCCCACAAAAGCCCTTATTAACATCTTATTTGACA
ACGAGACGCACGTAGGCTCGTTAAAACGCTTTGGCATTGACGTTCGGTTA
CTGCCGCTCAACCATCTGACTGCAAAGCAAATTCAGCAAGGAATTTCCGT
TCTTGAAGAAATTGAAGAGGCTCTCACTCGTGGCACGAATATGCCGCGTT
TGGATTTGGAGCAATTGTCAGCAAAGTTTTATGCTGTGTTGCCACGTAAT
TACGACAACCGACGCCCCCCAGTTATTTTGAGCATCGAGTTGCTTCAGCA
ATGCTACGATATGTGCATTGTATTGTTTCATATGGTGCACGCGATGTCTA
TTCTGAGCTCGGCAAGGGCGAAGATAGGGCCTTTGGGAGGGCAAAAGTAT
TTACTCACCCTTCCTGAGCAATTGTACAGCCTGCTCAATGTGGACCTAAG
TCTAGTGGTACCTGGATCTGAAGAGCACTTGATTATATCTGAAGCGTTTC
ATCAGACAAAGGGGGCGTTCATTGGCTCAGAATTATTAAGCGTTTGGAGG
GTTGATCGACATGGCGACGTTGAACGTTTCTCGCGGTTGAACTTAGTGAA
TCATGCGTTGTTGTGGTCAGGATGTCACATTGGATCTGTGCCATCAATTC
TTATGAATGGGCTGCAAATTGTGGGACACAGTGGTGGTCGATTGGGGAAA
GGCATCTACTGTGCGTCTGAAAGTGGGAAAAGTCTACAGTCCACTGTTCC
CGAGAGTCGAAGTCAAGTCGGGTGCATGTTTCTCGTGGAAGCGGCGTTGG
GAAGGAGCTACGAAGTGTTTGAGGATCAAAATTTTTTACTGTCTCCTCCT
CACGGGTTCAATTCCTTGAGGGCTTGTGGAAGAAGAGCACCTGCTGGATA
TAAAAATGTGCGGTTGGATAACGTGCCAGTTAGCATTGCGGTGATGGGAG
CACAACCGCAGATGAACGCTGCGCAAAGCAGCTTCTCACAAGACGAATTC
GTCGTTTATGACGAAGCACAGGTTCGGCTACGATATCTAGTGACGGTGAA
GAAGAAGTAA

Coding sequence (CDS) from alignment at ScGOVlb_3404:3936024..3941033+

>Gvermi12235.t1 ID=Gvermi12235.t1|Name=Gvermi12235.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=5010bp|location=Sequence derived from alignment at ScGOVlb_3404:3936024..3941033+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGACCGTGCCGGACCTTACCACTCCGCGCCGTCTGTTGCGCCGCTCTCA
TTTCTGGCAAGTGCACCTACGCAATACCGTCGTCGTCACCCGTCACGGCA
AGGGCGTCGGCCTCCACGGCGGCAGAGAGACCGTGCGACAGTTCCCCGAC
GCTCAGAAAGCCTCCAAGTGGGCCCACGACGCCTTCAACTCAAAAATGGC
AGATGGATATCTGCCACCTGAACAGTTTCGCGACACGCAAACTGCAGAAG
CGCTTCAGGTCTTTCACAAACCAAATCCTGATGTCACAAGCCGCGCCGAA
AACCCCGAAAAGCCTCAATCGCTGGCGGATTCTCACTCCACGCAGCTCTC
CATTAACCCAAAACAGTCCAAGCAGCCGGAGCAGATACACGTTACCATCA
CACCTGGGCGCCATAACCAAACCGCTGATGCGAAATCATCGGTACAATCC
CAAAATCTGAACACTCCTCACAACAACGGAGAGGTGAGCCACGAAAAACA
GGCCAACAAACCCGAACAACCTAGACGGGAAGAGCAATTGAAGCTTAGCA
CGCAGCCCATGTCCAACGAACACCCCAAAGAAAGCAAACAACCCGAGTCG
CTTCCTCTGGAAAAGCAGCAATCGAAGTCCAGTGAGCGGGAAACCCAGAC
GGATCAAAGAAAGCAAAAAGGGCATGAAAAGCCGAACAAACCGAGTATAT
TCATATCCCGCGATCAAGACATGAAGAGCGTTCAAAACAGACCGAGCGCA
CAAGTTGCAAACGAGAAAGCAACGAACACGCATGGCAAACCGGGCGAGCA
CGGCAAACCGGGCCAGCACGTCAAACCGGGCCAGCACGTCAAACCGGGCC
AGCACACCAAACCGGGCGAGCCCGACAAACCGGGCGAGCACATCAAACTG
GGCGAGCACACCAAACCGGGCGAGCACGTCAAACCGGGCGAGTACGTCAA
ACCGGGCAAGCACGTCAAACCGGGCAAGCACGTCAAACCGGGCGAGCACG
TCAAACCGGGCGAGCACGTCAAACCGGGCGAGCACGTCAAACTCGGCGAG
CACGACAAACTGGGCGGACACGTCAAACTCGGCGAGCACGGCGACTTGGG
CGAGCACGTCAAACCGGGCGAGCACGACAAACCCGGCAAGCACGTCAACC
CGGGCAAGCACGTCAAACCGGGCGAGCACGTCAAACCGGGCGAGCACGAC
AAACCAGGCGAGCTCGGCAAATCGGGCAAGCACGGCAAACCGGACAAGCA
CGTCAAACCGGGCGAGCACGGCAAACCCGGCAAACACGTCAAACCGGGCG
AGCACGACAAACCGGGCAAGCACGTCAAACCGGGCGAGCACGACAAACCG
GGCGAGCACGACAAACCGGGCAAGCACGTCAAACCGGGCGAGCACGACAA
ACCGGACAAGCACGTCAAACCGGGCAAGCACGTCAAAGCAGTCGAAGTCG
AGCACGGCAAATCGGGCGAGCACGGCAAACTGGACGAGCACGTCAAACTG
GACGAGCACGGCAAACTGGGCGAGCACGGCAAACCGGGCAAGCACGTCAA
ATTGGGCAAGCACGTCAAACTGGGCGAGCACTGCAAACTGGGCGCGCACG
TCAAATCGGGCGAGCACGTCAAATCGGGCGAGCACGTCAAATTGGGCGAG
CACGGCAAGTCAAGCGAGCAGCTCAAAGCTAGCGAGCAAGGCAAACTGAG
TGCCCATCGCAAATTGGGTGCGCAAGGCAACCCGATCGAGAGAGGCAAAC
CCAGCGAGCAGGACTCACCGAGCGACAAATTGAGCAAGCATGACATACTT
TGCGAGAAACCAAACAACCAGGGCAAACGGATCAAACGGGACACACCAAG
AGGAAAACTGAACGACCAAGGCAAACCAGCCGATCAAAATACACCGAGTG
AGAGAGACAAACCAAATGAGCAAGGCAAATCGACCAAACAAAATACATCC
AGCGAGAAGGACAAACCGATCGAGCAAGATAAGTCGAACGACAGCGATAG
ATCGAGGGGTTATGGCACCCTGGGTGAACATCGGAAGCCGCATGAACAAG
CCGAAAAGCATAGACAAGGAAAGCTTCCTAAGCAACCCAGAAAACTTGAA
CAGACGAAACAATCCGAAAAGTCTGCGCAGCTGATGCGAATCGAACGAGC
GGAGCAGCCACAACCCGCGCAACAGCTAGGAGCACATAGACAGACCGTGC
AGTCTGATAATCTCAAACCTTCGGCCGCGGTTCGATCCGAACAAAAGAGT
CCATCCAAAGGCGACGCACGACAGCATCCTTCCATAGGATCCGCATTGGT
CCGTCGATCTGCCCGTAAGCGCTCCGCCCCTGCACCCTACGTCGCAGAGT
CAGCATCCCGCCCGCGCCCTCGTCGACGACTATCTGAACCTCTTCCACCC
AAAGGTCCTTCCTCTCCCGTGCTTAAGACTCCTTCGAAAGTCCTCAATGA
GAAAGACTCTTCTAAAATTGCTGAGGTGCGCAGAGCCATCAACACCGATT
CTCCAAGTCCAAGAGCGACCCCTCTCATGACCACACCTCGGGAAGGTCCT
CAAAGCAAATCTAAAAGGCGGGGTGTAAAGCGAACTGGCAGAGGTCGCCC
GCAGGGAGTCGGCAAAAGTTCTGCCGTCAAGAAGCACAAGTGCCCATCAA
AAATTTTTCCTTCCGTTCCGGAAAATAGTTCTCTTGGCGTAGTTGATCAA
TCGAGCGGTGTCGATGATGGTGTTATCTACACAGAAAAATCAATTTCTGG
AGAGACCATTGTTTTCGATGTGTTGTTGGTCTATATTGACAAACACACTC
ACACGGACAAGTTCATCGTTTTGCAACTGATACATGATCCCAATTCCGAA
TCACCGTATGTCTTGTTCGAAAAAATTGGGCGTACAGGTTCCGAAGGCCA
ATCTCTGCGAATTGATTTTGCGACAAATGGTTTACACGAGGCGAGAGAAG
AGTTTGATCGGCGCTTTCACGATTACACAGGGTTACCTTGGACATCGCGT
GACGCAGCTCCGATTCCTGGCAAATATAGATTCGCCAGACAAGATTATGA
ACTCAAATTCAAAGTGTTGTTCCTGGCTGACCCTCATTGGCAGTATTGGG
TGGACGAAGGTGATATCAGAAAGCCTAAGAAATGGTTAGATTACAACGAA
GAAGACAGTATGCTTGCTGAAGAGCTTCAAATGGAGTACTCTTCCAACCC
TTGGCTTTCAGAACGAATAGTCCAGAACGGTTCTCACTTTGATCTCGTTA
ATTTGGAAACAATGACCACTACTGAGGTTGGCCATCCGAATAGCAGTGTT
CACCACTTTCGGAGAGCGACTGCAAGTGACATACCTAAATCTAAGCATAG
CAACCATGAGAACCAACCCAGCAGTGTGATTTCCGCGAATCAAGCGACCA
GCATCCAATCCTCAAGAAACAGCACTGGGATGAATAAGCCGGCCCCTCTG
CAACCTCATGTTTCGCAACTTGTAAGCCAGTCACGTTCTCAAGCACTAGC
AGGAGTCCCATTTGTACGGAGAACAGCCGAAGCAGGCTCAGAACTACCCA
CGGTTTCAAATGTTCCGAACATTGCTTCTGGTGCACCGTCACTTTTTCCT
GTTCCTCCTTTGGCCCATAGCACAGTCATATCTCAGGCGTTACTGGCGCC
AGCTACGATGCTGCCACAACCTTCTGCTCAAACTCTTCCCGTGAATCCCT
TAATGCATCCGATTCCCGGCACGATTCGATCGGTGCCTGTTTCCCTGCCT
GCTCCTCAATTCGGAGTCCCAAATCATACTTACAACGGGTCTATACCAGC
ATCTATCGATTCCTCGCTCGTCCAGAGAAATTTGCTTGGCGGTGTAGAGA
GCGGGCTTCTACCATTAGACGGTCGTTCAAAGCTGGTGGGTGAGACTGAA
CCATTGCTAATGAGTCTTGCAATGCAACAACAAGGTTCCCCATACCTACA
ATCCACCCTCCCAAATCCCACAAAAGCCCTTATTAACATCTTATTTGACA
ACGAGACGCACGTAGGCTCGTTAAAACGCTTTGGCATTGACGTTCGGTTA
CTGCCGCTCAACCATCTGACTGCAAAGCAAATTCAGCAAGGAATTTCCGT
TCTTGAAGAAATTGAAGAGGCTCTCACTCGTGGCACGAATATGCCGCGTT
TGGATTTGGAGCAATTGTCAGCAAAGTTTTATGCTGTGTTGCCACGTAAT
TACGACAACCGACGCCCCCCAGTTATTTTGAGCATCGAGTTGCTTCAGCA
ATGCTACGATATGTGCATTGTATTGTTTCATATGGTGCACGCGATGTCTA
TTCTGAGCTCGGCAAGGGCGAAGATAGGGCCTTTGGGAGGGCAAAAGTAT
TTACTCACCCTTCCTGAGCAATTGTACAGCCTGCTCAATGTGGACCTAAG
TCTAGTGGTACCTGGATCTGAAGAGCACTTGATTATATCTGAAGCGTTTC
ATCAGACAAAGGGGGCGTTCATTGGCTCAGAATTATTAAGCGTTTGGAGG
GTTGATCGACATGGCGACGTTGAACGTTTCTCGCGGTTGAACTTAGTGAA
TCATGCGTTGTTGTGGTCAGGATGTCACATTGGATCTGTGCCATCAATTC
TTATGAATGGGCTGCAAATTGTGGGACACAGTGGTGGTCGATTGGGGAAA
GGCATCTACTGTGCGTCTGAAAGTGGGAAAAGTCTACAGTCCACTGTTCC
CGAGAGTCGAAGTCAAGTCGGGTGCATGTTTCTCGTGGAAGCGGCGTTGG
GAAGGAGCTACGAAGTGTTTGAGGATCAAAATTTTTTACTGTCTCCTCCT
CACGGGTTCAATTCCTTGAGGGCTTGTGGAAGAAGAGCACCTGCTGGATA
TAAAAATGTGCGGTTGGATAACGTGCCAGTTAGCATTGCGGTGATGGGAG
CACAACCGCAGATGAACGCTGCGCAAAGCAGCTTCTCACAAGACGAATTC
GTCGTTTATGACGAAGCACAGGTTCGGCTACGATATCTAGTGACGGTGAA
GAAGAAGTAA