Gvermi12464.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12464.t1
Unique Name	Gvermi12464.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	686

Homology

[Close]

BLAST of Gvermi12464.t1 vs. uniprot
Match: A0A2V3IG59_9FLOR (PWWP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG59_9FLOR)

HSP 1 Score: 290 bits (741), Expect = 2.220e-83
Identity = 218/450 (48.44%), Postives = 261/450 (58.00%), Query Frame = 0

Query:    1 MRSKQNKQPPPSTVAIPSEENLPFQLGDLVLCRYSTYPYWPATVDQTHQKERHGQYVCMHDTRAHHQTLAFWCTFSNEDTGGWVRADRMVLFHPSLLHYVRVRRNHNWYGAQQSAIEAALKAFHTIHKGSTPPPEPQPPADMLTRSRQSNEHDLVSDDXXXXXXHADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR----------AAAVPKT---PPRKKRKTITPRPAPN-PRKRPKTAEQQLEAQLLD-----------------HA--------------------ESEQVAALKTRISEMQANLEKLTSSLRRKEKALSDLRSTGNVVTFAPVKQDTVPIESMPKA--FSGPVLSSDEFEHRVNAMRDLFDKLDRAAKVAHEKHQELSAEQDKIRKHYASLLEGVSDAQGQVVTHQKELADLLRGVLKQVV 397
            MRSK N+        +P ++N PFQLGDLVLCRYSTYPYWPAT+DQTHQ +R GQ+VCMH+T      L+FWCTFSNEDTGGWVRADR+VLFHP LL YVRV RNH W  AQ  AI  AL+AF ++H GST P                         XXXXXX   XXXXXXXXXXXXXXXX          X           XXXX           +A  P+      RKKRK+      P  P KR K+AE  LE QLL+                 HA                    +S QVAALK ++++MQ NL+KLT+SL+RKE AL+ LR  G+ V+FAPVK DT+ +E +P +     P+  S EFE RV A+R+LFDKLD AAK AH+K + L+ EQ+KIR  YA LL  VSDAQ  VV +Q EL+DLLRGV +  V
Sbjct:    1 MRSKPNRGVAAQRPQLPPQQNEPFQLGDLVLCRYSTYPYWPATIDQTHQPQRKGQHVCMHETAGGGSALSFWCTFSNEDTGGWVRADRIVLFHPDLLKYVRVHRNHRWSDAQIEAISVALRAFKSMHAGSTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTSKLDTTHDXEDPMDIGSDSSXXXXTRQGHRRTSTSSAGTPRAGAKSARKKRKSTGSAKTPGRPPKRSKSAEHHLEHQLLNPRTTRPQSTSSAQRHSRHAPPSSTPSQPESRRKVTPSKSDSAQVAALKLQLADMQRNLDKLTASLQRKEAALNQLREKGHTVSFAPVKTDTISLEQLPPSPDRDAPLFDSTEFEARVKAIRELFDKLDAAAKRAHDKRRILTEEQNKIRDEYAGLLNEVSDAQAHVVRYQSELSDLLRGVYQSRV 450

The following BLAST results are available for this feature:

BLAST of Gvermi12464.t1 vs. uniprot

BLAST of Gvermi12464.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IG59_9FLOR	2.220e-83	48.44	PWWP domain-containing protein n=1 Tax=Gracilariop...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 258..292
None	No IPR available	GENE3D	2.30.30.140		coord: 16..130 e-value: 3.2E-8 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 655..685
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..623
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..623
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..177
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 20..131
IPR000313	PWWP domain	PROSITE	PS50812	PWWP	coord: 26..95 score: 8.807351

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:4936575..4938761 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12464.t1	Gvermi12464.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 4936575..4938761 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12464.t1 ID=Gvermi12464.t1|Name=Gvermi12464.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=686bp
MRSKQNKQPPPSTVAIPSEENLPFQLGDLVLCRYSTYPYWPATVDQTHQK
ERHGQYVCMHDTRAHHQTLAFWCTFSNEDTGGWVRADRMVLFHPSLLHYV
RVRRNHNWYGAQQSAIEAALKAFHTIHKGSTPPPEPQPPADMLTRSRQSN
EHDLVSDDDEPEEAHADKAKPPPDDDPMDLGSESSDDNRPTAKTATTRRR
RSSTSAKSPRAAAVPKTPPRKKRKTITPRPAPNPRKRPKTAEQQLEAQLL
DHAESEQVAALKTRISEMQANLEKLTSSLRRKEKALSDLRSTGNVVTFAP
VKQDTVPIESMPKAFSGPVLSSDEFEHRVNAMRDLFDKLDRAAKVAHEKH
QELSAEQDKIRKHYASLLEGVSDAQGQVVTHQKELADLLRGVLKQVVDYV
HSNPHVADEEKKGKTPSAESKENGSAKAFVASKEGSGKGDISPKRTKGPA
GNGTTEKEDAEDTDKEETGEREDSPANEESKAEDEMDVDSVAQKEQNAMA
ESPKKDVKLEESPPTKKAEAGERAKEPKKNTETEVKVSKQAKEEKIDTEA
GDSAAAAKPTWKQTRGSIAEKKPVQFLAPKLKKREGERETRAVKEPEGSV
DKKRAPKVGLKKEDKEAVKGEDSVADGGQKVVADCEKEDGTVKGVSVKVE
TDETGGVTMEVKRETAADEAKKSGGAKKEGTKVES*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000313	PWWP_dom