Gvermi12234.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12234.t1
Unique NameGvermi12234.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length230
Homology
BLAST of Gvermi12234.t1 vs. uniprot
Match: A0A2V3J038_9FLOR (Thiamine phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J038_9FLOR)

HSP 1 Score: 244 bits (623), Expect = 6.750e-79
Identity = 129/194 (66.49%), Postives = 158/194 (81.44%), Query Frame = 0
Query:   24 LSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKLAAIM 217
            ++V+Q+V+Q  ++   P +V+ VQLRDK +SREQS+ LG+ LR ITA+A VAFVVNDDIQLAALL+ADGVHLGQ+D+ V  AR +LGNDAIVGVSA  EQ+ID AI  GADYVGVGPVFATSSK DAG+A+GE +LR+LV YT  R+PVVAIGGI+  NA +CKRAGADGVAVISAIM ++ P   A  L++IM
Sbjct:    1 MTVEQIVAQVTSSSSHPNRVTFVQLRDKRLSREQSLHLGKVLRHITAQANVAFVVNDDIQLAALLQADGVHLGQEDESVSVARHVLGNDAIVGVSADCEQQIDVAIAHGADYVGVGPVFATSSKADAGDAIGEYRLRQLVEYTRSRIPVVAIGGIDATNASLCKRAGADGVAVISAIMRNENPQHAAYHLSSIM 194          
BLAST of Gvermi12234.t1 vs. uniprot
Match: A0A3M1L5F4_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1L5F4_9CHLR)

HSP 1 Score: 172 bits (436), Expect = 2.020e-50
Identity = 99/205 (48.29%), Postives = 131/205 (63.90%), Query Frame = 0
Query:    9 DPSVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKL 213
            D SVY++TDR  A   S+ +VV  A+         +VVQLR+K  +  Q IELG+ L +IT  AGV  +VND + +A  + A+GVH+GQDD P   AR+L+G D I+GVSA T +E  +A  DGADY+GVG V+ T SKPDAGE +G + L  +       +PVVAIGGI  DNA    RAGA GVAVISA++ +  P   A++L
Sbjct:    6 DWSVYVITDRRVAGDRSILEVVRAALRGG-----ATVVQLREKAATTRQMIELGRALHRITQEAGVPLIVNDRVDVALAVGAEGVHVGQDDMPAALARRLIGPDRILGVSAGTVEEAVQAERDGADYLGVGDVYGTPSKPDAGEPIGVEGLAEIARAVS--IPVVAIGGIRPDNAAAVIRAGASGVAVISAVVGAPDPEAAARRL 203          
BLAST of Gvermi12234.t1 vs. uniprot
Match: I0BPT0_9BACL (Thiamine-phosphate synthase n=3 Tax=Paenibacillus mucilaginosus TaxID=61624 RepID=I0BPT0_9BACL)

HSP 1 Score: 167 bits (424), Expect = 1.300e-48
Identity = 100/204 (49.02%), Postives = 128/204 (62.75%), Query Frame = 0
Query:   11 SVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKLA 214
            SVYLVTD       S  ++V  AVA       V++VQLRDK       +  G+ +R++   AG+ FVVND   LA LL ADGVH+GQDD P   AR+LLG DAI+GVSA T +E + A+  GADY+GVGPV+AT+SK DAGEA+G D + R+      ++P+V IGGI+  NA     +GA GVAVISAI     P   A+ LA
Sbjct:   11 SVYLVTDTAGYEHRSAAEIVRAAVAGG-----VTLVQLRDKQAQLRDVLPAGREIRELCRSAGIPFVVNDRADLALLLEADGVHVGQDDLPAQEARRLLGPDAIIGVSAGTMEEAEWAVAQGADYLGVGPVYATASKKDAGEAIGTDLIARIRSRWP-QLPLVGIGGIHQGNAAPVLASGAQGVAVISAITRQSDPQSAARGLA 208          
BLAST of Gvermi12234.t1 vs. uniprot
Match: A0A178M8F8_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexus islandicus TaxID=1707952 RepID=A0A178M8F8_9CHLR)

HSP 1 Score: 167 bits (423), Expect = 1.960e-48
Identity = 96/215 (44.65%), Postives = 136/215 (63.26%), Query Frame = 0
Query:    4 SRRNFDPSVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKLAAIMA 218
            S+   D S+Y+VTD   + G S   V+  A+A        +VVQ R+K  S  Q I   Q LR++T RAGV  +VND + +A  + ADGVH+GQDD P   AR+L+G D ++GVSAA   E  +A+ +GADY+GVGPVFAT +KPDA   +G + LR +  +    +PVVAIGGIN  NA     AGA G+AV+SA+++++     A++L A++A
Sbjct:    3 SKTPIDWSLYVVTDAGLSRGRSHLAVIEAAIAGG-----ATVVQYREKAASTRQMIAEAQVLRELTRRAGVPLIVNDRLDVALAIDADGVHVGQDDMPAAVARRLIGPDKLLGVSAANLAEAMQAVQNGADYLGVGPVFATPTKPDAAPPIGMEGLREICRHVP--LPVVAIGGINATNAAAAIAAGAQGIAVVSAVVAAEDVVAAARQLRALVA 210          
BLAST of Gvermi12234.t1 vs. uniprot
Match: B8G7I9_CHLAD (Thiamine-phosphate synthase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) TaxID=326427 RepID=B8G7I9_CHLAD)

HSP 1 Score: 167 bits (422), Expect = 3.210e-48
Identity = 93/213 (43.66%), Postives = 136/213 (63.85%), Query Frame = 0
Query:    5 RRNFDPSVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKLAAIM 217
            R+  D S+Y+VTD   + G S   V+  A+         +VVQ R+K+    Q +   Q LR++T R GV  +VND + +A  + ADGVHLGQDD P   AR+L+G D I+G+SA+T  E  +A+ DGADY+GVGP+FAT +KPDA   +G D LR +  +    +P+VAIGGIN  NA     AG DG+AV+SA+++++  ++ AQ+L A++
Sbjct:    4 RQAVDWSLYVVTDAGLSRGRSHVAVIEAAITGG-----ATVVQYREKHAPTRQMVAEAQVLRELTRRTGVPLIVNDRLDVALAVDADGVHLGQDDMPAALARRLIGPDKILGISASTLAEALQAVQDGADYLGVGPIFATPTKPDAAPPIGIDGLRLIRQHVS--LPIVAIGGINATNAAEVMAAGPDGIAVVSAVVAAEDIAVAAQELRAMV 209          
BLAST of Gvermi12234.t1 vs. uniprot
Match: H5SLW3_9ZZZZ (Thiamine phosphate synthase n=1 Tax=uncultured prokaryote TaxID=198431 RepID=H5SLW3_9ZZZZ)

HSP 1 Score: 166 bits (421), Expect = 3.920e-48
Identity = 100/195 (51.28%), Postives = 126/195 (64.62%), Query Frame = 0
Query:    9 DPSVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSS 203
            D  VY++TDR T  G S + V   A+         +VVQLRDK     + +E  + LR +T RA V FVVND + +A    ADG H+G+DD PV  AR+LLG   IVG SA T +E  RA  +GADY+GVGPVFATS+KPDAG A+G + LRR+V     R+PVV IGGI +DNA    RAGA GVAVISA+ ++
Sbjct:    4 DLRVYVITDR-TFRGRSHEDVARAALVGG-----ATVVQLRDKQAGGRELVEWARQLRALTRRARVTFVVNDRVDVALAAEADGAHVGEDDLPVADARRLLGPGRIVGASAGTVEEALRAQAEGADYLGVGPVFATSTKPDAGGAIGPEGLRRIVQAV--RIPVVGIGGITLDNAAEVIRAGAAGVAVISAVAAA 190          
BLAST of Gvermi12234.t1 vs. uniprot
Match: A0A7Z9ZIN4_9CHLR (Thiamine-phosphate synthase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Z9ZIN4_9CHLR)

HSP 1 Score: 165 bits (417), Expect = 1.270e-47
Identity = 92/203 (45.32%), Postives = 128/203 (63.05%), Query Frame = 0
Query:   11 SVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKL 213
            ++Y++TD   + G S  +V   A+         +V+QLRDK  +  + +E GQ LR +T   GV F+VND + +A  + ADGVHLG DD PV  AR+L+G +AI+G S  T ++  +A  DGADY+GVG VF T +KPDAG  +G + LR +V      +PVVAIGGI  DNA  C RAGA GVAVISA++ ++     A++L
Sbjct:    4 ALYVITDPKLSRGRSHLEVARAAIRGG-----ATVIQLRDKEATTRELVETGQRLRALTREMGVTFIVNDRVDVALAVEADGVHLGVDDMPVPIARRLMGPEAIIGFSPETVEQARQAEADGADYLGVGAVFGTGTKPDAGPPIGLEGLREMVQAVS--IPVVAIGGITADNAARCIRAGAAGVAVISAVIVAEDIEAAARRL 199          
BLAST of Gvermi12234.t1 vs. uniprot
Match: UPI0015EEC979 (thiamine phosphate synthase n=1 Tax=Halorhabdus sp. FL145 TaxID=2750670 RepID=UPI0015EEC979)

HSP 1 Score: 164 bits (416), Expect = 1.910e-47
Identity = 96/216 (44.44%), Postives = 132/216 (61.11%), Query Frame = 0
Query:    9 DPSVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGE---ALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKLAAIMASRD 221
            D  VYLVT  + +   +  +VV+ A+        V VVQLR+K++S  +  E+GQ +R+IT +AGV F+VND + LA  L ADGVHLG +D PV  ARQLLG DAI+G S +  +    A   GADY+GVG ++AT SK D  +   A+G D++  +V   D  +PVV IGGI  +NA     AGADGVAVI+ I  +  P+   + LA ++A  D
Sbjct:    3 DWDVYLVTQESLSGDRTTPEVVANAI-----DGSVDVVQLREKDVSARERYEMGQEIREITRKAGVTFIVNDRVDLALALEADGVHLGDEDLPVPEARQLLGEDAIIGRSVSFVEAAREAAAAGADYLGVGAIYATGSKDDIDDEEYAIGTDRVAEIVDAVD--IPVVGIGGITAENAGAVIEAGADGVAVITEITGADDPAAATRDLATVVADAD 211          
BLAST of Gvermi12234.t1 vs. uniprot
Match: THIE_CHLAA (Thiamine-phosphate synthase n=3 Tax=Chloroflexi TaxID=200795 RepID=THIE_CHLAA)

HSP 1 Score: 164 bits (416), Expect = 2.220e-47
Identity = 94/209 (44.98%), Postives = 135/209 (64.59%), Query Frame = 0
Query:    9 DPSVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKLAAIM 217
            D  +Y+VTD   + G S + V+  A+         +VVQ R+K+ S  Q IE    LR +T RAGV  +VND + +A  + ADGVH+GQDD PV  AR+L+GN  ++GVSA    E  +A+ DGADY+GVGP+FAT++KPDA   +G D LR +  +    +P+VAIGGIN  NA    RAGADG+AV+SA++++   +  A++L A++
Sbjct:    8 DWRLYVVTDAGLSRGRSHRAVIEAAIVGG-----ATVVQYREKHASTRQMIEEALELRDLTRRAGVPLIVNDRVDVALAVDADGVHVGQDDMPVALARRLIGN-KLLGVSAHNLSEALQAVRDGADYLGVGPIFATTTKPDAAAPIGLDGLRAIRQHVS--IPIVAIGGINQANAADVMRAGADGIAVVSAVVAADDVTAAARQLRALV 208          
BLAST of Gvermi12234.t1 vs. uniprot
Match: A0A229UR56_9BACL (Thiamine-phosphate synthase n=1 Tax=Paenibacillus rigui TaxID=554312 RepID=A0A229UR56_9BACL)

HSP 1 Score: 164 bits (416), Expect = 2.570e-47
Identity = 94/206 (45.63%), Postives = 128/206 (62.14%), Query Frame = 0
Query:   12 VYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRDKNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQPVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDAGEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAIMSSQQPSLIAQKLAAIM 217
            +YLV   +   G S  ++  +A+A       V+ VQLR+KN    Q +E G  LR++    G+ FVVND + +A LL ADGVH+GQDD P   AR+LLG+D IVG+SA T +E + A++ GADY+GVG ++AT +K DAG A+G D LR +       +PVV IGGI   NAP    AGADG+AV+SAI     P + A +L  I+
Sbjct:   12 LYLVLGLHEQEGRSALEIAREAIAGG-----VTFVQLREKNAPLRQVLEQGIQLRELCRNHGIPFVVNDRVDVAILLDADGVHVGQDDLPGLEARKLLGDDKIVGISAGTLEEAEWAMEQGADYLGVGAIYATFTKQDAGAAIGTDLLREV--KGRWNIPVVGIGGITRGNAPEVMAAGADGIAVVSAITKQSNPQIAASELRGIV 210          
The following BLAST results are available for this feature:
BLAST of Gvermi12234.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J038_9FLOR6.750e-7966.49Thiamine phosphate synthase n=1 Tax=Gracilariopsis... [more]
A0A3M1L5F4_9CHLR2.020e-5048.29Thiamine-phosphate synthase n=1 Tax=Chloroflexi ba... [more]
I0BPT0_9BACL1.300e-4849.02Thiamine-phosphate synthase n=3 Tax=Paenibacillus ... [more]
A0A178M8F8_9CHLR1.960e-4844.65Thiamine-phosphate synthase n=1 Tax=Chloroflexus i... [more]
B8G7I9_CHLAD3.210e-4843.66Thiamine-phosphate synthase n=1 Tax=Chloroflexus a... [more]
H5SLW3_9ZZZZ3.920e-4851.28Thiamine phosphate synthase n=1 Tax=uncultured pro... [more]
A0A7Z9ZIN4_9CHLR1.270e-4745.32Thiamine-phosphate synthase n=1 Tax=Anaerolineae b... [more]
UPI0015EEC9791.910e-4744.44thiamine phosphate synthase n=1 Tax=Halorhabdus sp... [more]
THIE_CHLAA2.220e-4744.98Thiamine-phosphate synthase n=3 Tax=Chloroflexi Ta... [more]
A0A229UR56_9BACL2.570e-4745.63Thiamine-phosphate synthase n=1 Tax=Paenibacillus ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..221
e-value: 4.5E-67
score: 227.3
IPR022998Thiamine phosphate synthase/TenIPFAMPF02581TMP-TENIcoord: 12..200
e-value: 5.4E-56
score: 188.8
IPR022998Thiamine phosphate synthase/TenICDDcd00564TMP_TenIcoord: 12..215
e-value: 8.60834E-74
score: 220.468
IPR034291Thiamine phosphate synthaseTIGRFAMTIGR00693TIGR00693coord: 11..212
e-value: 4.2E-57
score: 190.6
IPR034291Thiamine phosphate synthaseHAMAPMF_00097TMP_synthasecoord: 9..218
score: 26.269344
NoneNo IPR availablePANTHERPTHR20857THIAMINE-PHOSPHATE PYROPHOSPHORYLASEcoord: 1..219
IPR036206Thiamin phosphate synthase superfamilySUPERFAMILY51391Thiamin phosphate synthasecoord: 4..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3934788..3935560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12234.t1Gvermi12234.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3934788..3935560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12234.t1 ID=Gvermi12234.t1|Name=Gvermi12234.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=230bp
MRISRRNFDPSVYLVTDRNTAPGLSVQQVVSQAVATPEKPRQVSVVQLRD
KNISREQSIELGQHLRQITARAGVAFVVNDDIQLAALLRADGVHLGQDDQ
PVYAARQLLGNDAIVGVSAATEQEIDRAIDDGADYVGVGPVFATSSKPDA
GEALGEDQLRRLVLYTDCRVPVVAIGGINVDNAPVCKRAGADGVAVISAI
MSSQQPSLIAQKLAAIMASRDLSTTQQGA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR022998ThiamineP_synth_TenI
IPR034291TMP_synthase
IPR036206ThiamineP_synth_sf