Gvermi12308.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12308.t1
Unique NameGvermi12308.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length148
Homology
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BLAST of Gvermi12308.t1 vs. uniprot
Match: A0A2V3IQF8_9FLOR (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQF8_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 2.300e-56
Identity = 84/145 (57.93%), Postives = 112/145 (77.24%), Query Frame = 0 
Query:    2 ITRILSFLSYVPVAIVFHDNVATVHVETTHDMEPNIPLNTPCLITRNAKPSNYRRGEVLAIMAPDGHLTLRRVVALPGDFVRQASSTTIVPHGYVWVERDQNQTHHELPHGKTPIALVTGRVVASLGGNAAIVPSKKAITPSLPF 146
            I+R++S LSYVP+AIVFHD + T++VE T DMEP +P NTPC+I R AK SN+RRGE+LA+MAPDGHLTLRR+VALPGD VR     +IVP+G++W++ D  +    LP GKTP+ALV GR+ ++  GN A+V SK   TP++P+
Sbjct:    6 ISRLVSLLSYVPLAIVFHDKIGTIYVERTSDMEPAVPRNTPCIIARGAKISNFRRGEILAVMAPDGHLTLRRLVALPGDHVRDDPHYSIVPNGFLWLQPDHPEHACPLPRGKTPVALVVGRLHSAFRGNTALVQSKNTFTPAMPY 150
The following BLAST results are available for this feature:
BLAST of Gvermi12308.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQF8_9FLOR2.300e-5657.93Mitochondrial inner membrane protease subunit 2 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 20..133
e-value: 5.3E-6
score: 28.3
NoneNo IPR availableCDDcd06462Peptidase_S24_S26coord: 33..123
e-value: 4.20133E-5
score: 38.0139
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 30..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4155678..4156121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12308.t1Gvermi12308.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4155678..4156121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12308.t1 ID=Gvermi12308.t1|Name=Gvermi12308.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=148bp
MITRILSFLSYVPVAIVFHDNVATVHVETTHDMEPNIPLNTPCLITRNAK
PSNYRRGEVLAIMAPDGHLTLRRVVALPGDFVRQASSTTIVPHGYVWVER
DQNQTHHELPHGKTPIALVTGRVVASLGGNAAIVPSKKAITPSLPFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036286LexA/Signal_pep-like_sf