Gvermi12102.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12102.t2
Unique NameGvermi12102.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length673
Homology
BLAST of Gvermi12102.t2 vs. uniprot
Match: A0A2V3J5H1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H1_9FLOR)

HSP 1 Score: 649 bits (1675), Expect = 1.980e-224
Identity = 390/685 (56.93%), Postives = 480/685 (70.07%), Query Frame = 0
Query:    4 KNAANGAVPGSDLDRYGPSSSLPLLVRMPDGEDHQIDIPSNASVKDLKTSIANLPWQPSGTDPQQQSLELEFGGETLNENQTLSHYHIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAAFDDANDDTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAPPTPRQLIRKLSIMRPDLYDSEAAVKATSSLSLRNIANLANNIPARPSESPNIGSGELKRGNTWFHEIMNSMNTSLRDPRKRAVHHETQEE----VEGDSEGENGLGTD---EGNVSGDRKDLPFE-GQTKIRLRSTQN--KMDSSSADVDENETTTAPINDMNVINETLIKPEGDTLTAAKSSTKDQDGSKPETDGGSSTTSVSKKDPEEA-EMKKSTRNQIDVSNTSIQTPPKQVTTSSESHSIVPSRPIVHQDKQVIGLTPERQA---SGEEVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRSIPQVHPSLIS-SATAAIGQGPQTRLNPTINPHIPMAGQPGAVSQAALVSRALNAQALMGNPNIMARTGAMPHTGMMHAQNVLSTQRP-VNANDSLAGHTQALSASRPLGSKAPSHSNPLTNFPYKNF 672
            +N+++GA     LDRYG  +SLPLLVRMPDGE+HQ+D+P NASVKDLKTSIANLPWQ S +DPQQQSLELEFGGETLN+NQTLSHY+IPEVYDHADGFLKTISDSGYLD +KKVEALDKACAVVRGISRGEKDMERL+GA FDD +DDTP SPSAQPSLR+M+RSR SRIPSLN GALN +G  G+  ++LFSPSAPPTPRQL+RKLS++RPDLYD+ AA KATSSLSL    N+ N    R +ES + G+GELKRGNTWF +IM ++N+S RDPRKR   ++  ++    VEG+SEGEN    +   + N SG +     E G    +  S  N  K D +++    +  +    ND    NE     +  ++  AKSS            G S+ T+ ++  PE++ +++ +     D   T+ Q    Q   SS S  ++P RPI +QDKQVIGLTPERQ    + +E R PR+RGRKRKNPHL+EEERKAQ  AQNRESAKLSRIRRKH+T+EYERRVN+LEGENENLR TIS LEDRLQMLQNLLTI+VQRR+IPQVHPS++   + A +  G Q RL+  +  ++ +AGQ G      LV  ALNAQA++ N ++M R G   H GMM  Q   S+QRP +N N ++ G  Q L  S P+     S SNPL N  YK F
Sbjct:    6 ENSSSGAAA---LDRYGAGASLPLLVRMPDGENHQVDVPPNASVKDLKTSIANLPWQLSDSDPQQQSLELEFGGETLNDNQTLSHYNIPEVYDHADGFLKTISDSGYLDHEKKVEALDKACAVVRGISRGEKDMERLLGAVFDDLHDDTPGSPSAQPSLRSMRRSRPSRIPSLNFGALNPIGVGGRSNSRLFSPSAPPTPRQLMRKLSLLRPDLYDTAAAEKATSSLSLAIPTNIGNKSAVRANESQSQGNGELKRGNTWFQDIMTTINSSHRDPRKRGDLNDDDQDHGDDVEGNSEGENSEDLEALTDPNASGAKSSTLVELGDILKQSTSPTNSIKTDGTASQPGTSLVSKPTQNDQLKFNE----QQQSSVDDAKSSAAPA--------GDSALTTKAQGGPEKSLKVEGALPTSTDGKGTTNQGSASQPPPSSNSTKVIPGRPIPNQDKQVIGLTPERQTPATASQEPRLPRRRGRKRKNPHLSEEERKAQXXAQNRESAKLSRIRRKHMTLEYERRVNSLEGENENLRGTISALEDRLQMLQNLLTISVQRRAIPQVHPSMMPPQSNAPMLPGGQNRLSAALGTNVSIAGQQG------LVPGALNAQAMLANQSVMGRAGISLHGGMMQTQVPGSSQRPPINTNGTMMGAPQTLPGSAPMRQSGSSQSNPLANLRYKTF 669          
BLAST of Gvermi12102.t2 vs. uniprot
Match: A0A7S1T822_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T822_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 4.450e-20
Identity = 137/537 (25.51%), Postives = 213/537 (39.66%), Query Frame = 0
Query:   20 GPSSSLPLLVRMPDGEDHQIDIPSNASVKDLKTSIAN---LPWQPSGTDPQQQSLELEFGGETLNENQTLSHYHIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAAFDDANDDTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLG--PEGKPLTKLFSPSAPPTPRQLIRKLSIMRPDLYDSEAAVKATSSLSLRNIANLANNIPARPSESPNIGSGELKRGNTWFHE---IMNSMNTSLRDPRKRAVHHETQEEVEGDSEGENGLGT-DEGNVSGDRKDLPFEGQTKIRLRSTQNKMDSSSADVDENETTTAPINDMNVINETLIKPEGDTLTAAKSSTKDQDGSKPETDGGSSTTSVSKKDPEEAEMKKSTRNQIDVSNTSIQTPPKQVTTSSESHSIVPSRPIVHQDKQVIGLTPERQASGEEVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS 547
            G  S+ P+++RMPDG D Q+DIP  A+V D+K  +     +PW    + P  +      G   L++N  LS YHIPE Y      L TI D+  L P  + EA+  A  VV+ +S G +D E L   A    +D        Q +L  +   R    P     + N L   P  K        S    P  +++ LS   P L+   A  + +++ +L             P+  P   S   +RG     E   +  S N +  D              E  + G   L   ++GNV  +      +G + +      + +DS+  ++D+ +    P+ +MN          G +L  A                                                                      V Q  Q +    E Q +    R PRKRGRKRK PHLTEEER+  R+ +NRESA+ SR R++++  +YE ++  +  EN++L   +S L +RL+ L+ +LT+ V+ RS
Sbjct:   47 GDGSTFPMVLRMPDGNDRQLDIPHTATVGDVKHRLRTDMGIPWDMDLSFPSHED-----GSAALDDNALLSRYHIPEAYQIGGALLWTIDDA-QLPPYARAEAVRVANEVVKNVSIGVRDSEELACRALQGTDDQ-------QQTLEKVNGPREFVAPDEEQYSPNSLDMVPGVKKSDPFHHGSNVVDPTHVVQLLSDKLPCLFTPAARDEFSNAWTL-----------GTPTLPP---SSARQRGTLTHPEEVAVPQSSNANWIDDLCSIWSDPRMSVPEPRNPGNGFLDALEDGNVDCNHT---AKGTSSVEEEDKGHYVDSNDEEIDDCDDD--PLEEMNAA-------LGVSLPTAS---------------------------------------------------------------------VAQAPQAL----EDQVAKATGRSPRKRGRKRKFPHLTEEERRTMRRDRNRESARRSRDRKRNIQKQYESKITAVRKENDSLEGQVSALSNRLEFLKQILTVHVRSRS 471          
BLAST of Gvermi12102.t2 vs. uniprot
Match: A0A1X6P6M8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6M8_PORUM)

HSP 1 Score: 91.3 bits (225), Expect = 2.730e-15
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 0
Query:   12 PGSDLDRYGPSSS---LPLLVRMPDGEDHQIDIPSNASVKDLKTSIANL-PWQPSGTDPQQQSLELEFGGETLNENQT-LSHYHIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAA 144
            P  D++R G +SS   +PLLVR+P GE  Q+D+P++A+V D++  IA   P  P+      + + L++ G  LN+    L  YHIP+ YD A G L+ I   G   P     A+D A AVV   SRGE++MERL+  A
Sbjct:  106 PPPDVERRGSASSSLSIPLLVRLPSGEKTQLDVPADATVGDVRRRIAAASPEMPAA----MEGVRLQWAGTELNDPAAALDDYHIPDTYDQAFGLLRAIDSRGA--PGVTAAAMDTAVAVVSSASRGERNMERLVAEA 237          
BLAST of Gvermi12102.t2 vs. uniprot
Match: A0A2V3ITI3_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI3_9FLOR)

HSP 1 Score: 68.6 bits (166), Expect = 2.670e-10
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  465 RKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQ 544
            +KRGRK KNP LT+EER   R+ QN E AKLSR+RRK    EYE  +N L  EN  L+  +   E+RL  +Q+LLT++VQ
Sbjct:   30 KKRGRKCKNPELTDEERVLWRKQQNTEGAKLSRVRRKVNGAEYESNLNVLINENTMLKKQVDEHENRLACMQSLLTVSVQ 109          
BLAST of Gvermi12102.t2 vs. uniprot
Match: M2XXC4_GALSU (BZIP transcription factor isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXC4_GALSU)

HSP 1 Score: 72.4 bits (176), Expect = 1.140e-9
Identity = 126/523 (24.09%), Postives = 205/523 (39.20%), Query Frame = 0
Query:   24 SLPLLVRMPDGEDHQIDIPSNASVKDLKTSIANLPWQPSGTDPQQQSLELEFGGETLNENQTLSHYHIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAAFDDANDDTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAPPTPRQLIRKLSIMRPDLYDSEAAVKATSSLSLRNIAN----LANNIPARPSESPNI----GSGELKRGNTWFHEIMNSMN-TSLRD---PRKRAVHHETQEEVEGDSEGENGLGTDEGNVSGDRKDLPFEGQTKIRLRSTQNKMDSSSADVDENETTTAPINDMNVI----NETLIKPEGDTLTAAKSSTKDQDGSKPETDGGSSTTSVSKKDPEEAEMKKSTRNQIDVSNTSIQTPPKQVTTSSESHSIVPSRPIVHQDKQVIGLTPERQASGEEVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLED 530
            + PLL+ +PDG+  Q+ +    ++ D+K  +     +    D     L   FG   L +N+TL  Y IPE+Y+  +  L+ I + G LDP KK EAL++ C VV  +  G  D + L+     D       S   + + R    +R  +         N + P   P                 R  + +        +AV   S++S  N+      ++  +P    + PN           R   +F ++      +SLR    PR      +T            G   +E ++     D          L  +Q   D++   + E  +        NV+    NE   K      T A SS  D   +  +     S ++ S  D EE    KS   +   + ++        T S+ ++  +    I + +K              E R  ++RGRKRK+P +TEEERKA R  QNR SA+ SR R+K     Y++R+  L  EN+ LR T+  L++
Sbjct:    7 TFPLLLDLPDGQRRQLQVSVYDTIGDVKKKLCE---EFHFID----MLHFHFGNIELQDNKTLYDYGIPEIYEQTESLLRMI-ELGGLDPQKKPEALERMCIVVESMKNGVTDPKELVSVVKRD-------SKITETNARTGNANRHEQSSCSKQAQSNVVQPPTSP-----------------RSFTSVTKQGNSQTSAVGFHSAVSSSNVDTKPSIISPKLPLERLDEPNTLVDNNDDLFARLTDYFPDLFTPKGLSSLRSGATPRAWTTPRDT------------GFHMEESSLVSSPVDWVTGTNDNHSLLGSQAIKDNAPNWIREFTSN------WNVLPQDRNEKSPKRRS-RQTEANSSVYDSFQNSGDEHENLSVSNDSSSDREELLECKS--GEYSTNQSTYSGSHSDNTNSNHNNPTLDDDHISNMEKH-------------ETRTVKRRGRKRKHPEMTEEERKAYRAMQNRRSAERSRQRKKIQQEAYQKRMEELCTENDELRSTVQALQE 463          
BLAST of Gvermi12102.t2 vs. uniprot
Match: A0A7S0T7X4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7X4_9RHOD)

HSP 1 Score: 65.9 bits (159), Expect = 5.870e-8
Identity = 37/84 (44.05%), Postives = 59/84 (70.24%), Query Frame = 0
Query:  460 EVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITV 543
            +++ P+KRGRKRKNP LT+ +R  +R+ QNR SAK SR ++K  T+E+ +R+ T+  EN++L+  +  L  RL ++Q LL + V
Sbjct:  222 DLKVPKKRGRKRKNPQLTDAQRMEERKMQNRASAKKSREKKKVQTVEHVQRIETILHENQSLKAELEHLGKRLDLMQQLLAVQV 305          
BLAST of Gvermi12102.t2 vs. uniprot
Match: R7Q767_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q767_CHOCR)

HSP 1 Score: 60.8 bits (146), Expect = 1.430e-7
Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  137 MERLIGAAFDDANDDTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAPPTPRQLIRKLS 211
            MERLI + F+D   + P   +AQPS+R +KR   S+IPSLN   L    P         SP  PPTP QL+R+LS
Sbjct:    1 MERLIASVFNDDYPNAPPDDTAQPSIRTLKRKGRSKIPSLNFSHLPPPLPFDSSSKPSGSPRPPPTPNQLMRRLS 75          
The following BLAST results are available for this feature:
BLAST of Gvermi12102.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J5H1_9FLOR1.980e-22456.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1T822_9RHOD4.450e-2025.51Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6P6M8_PORUM2.730e-1540.58Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3ITI3_9FLOR2.670e-1052.50BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
M2XXC4_GALSU1.140e-924.09BZIP transcription factor isoform 1 n=2 Tax=Galdie... [more]
A0A7S0T7X4_9RHOD5.870e-844.05Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
R7Q767_CHOCR1.430e-745.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 504..538
NoneNo IPR availableGENE3D3.10.20.90coord: 22..97
e-value: 1.2E-7
score: 33.4
NoneNo IPR availableGENE3D1.20.5.170coord: 466..541
e-value: 2.6E-9
score: 38.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 635..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..436
NoneNo IPR availableCDDcd14686bZIPcoord: 482..533
e-value: 2.61442E-9
score: 51.3921
NoneNo IPR availableCDDcd17039Ubl_ubiquitin_likecoord: 27..91
e-value: 4.2249E-8
score: 48.3614
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 481..539
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 477..541
e-value: 1.9E-10
score: 50.7
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 479..536
e-value: 1.1E-9
score: 38.2
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 479..542
score: 10.978449
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 27..91
e-value: 2.3E-5
score: 24.0
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 25..93
score: 12.509177
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 17..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3416456..3418474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12102.t2Gvermi12102.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3416456..3418474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12102.t2 ID=Gvermi12102.t2|Name=Gvermi12102.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=673bp
MSGKNAANGAVPGSDLDRYGPSSSLPLLVRMPDGEDHQIDIPSNASVKDL
KTSIANLPWQPSGTDPQQQSLELEFGGETLNENQTLSHYHIPEVYDHADG
FLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAAFDDAND
DTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAP
PTPRQLIRKLSIMRPDLYDSEAAVKATSSLSLRNIANLANNIPARPSESP
NIGSGELKRGNTWFHEIMNSMNTSLRDPRKRAVHHETQEEVEGDSEGENG
LGTDEGNVSGDRKDLPFEGQTKIRLRSTQNKMDSSSADVDENETTTAPIN
DMNVINETLIKPEGDTLTAAKSSTKDQDGSKPETDGGSSTTSVSKKDPEE
AEMKKSTRNQIDVSNTSIQTPPKQVTTSSESHSIVPSRPIVHQDKQVIGL
TPERQASGEEVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRR
KHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRSIPQ
VHPSLISSATAAIGQGPQTRLNPTINPHIPMAGQPGAVSQAALVSRALNA
QALMGNPNIMARTGAMPHTGMMHAQNVLSTQRPVNANDSLAGHTQALSAS
RPLGSKAPSHSNPLTNFPYKNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf