Gvermi12341.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12341.t1
Unique NameGvermi12341.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length550
Homology
BLAST of Gvermi12341.t1 vs. uniprot
Match: A0A6A7G8X9_9CRUS (Zinc finger protein 510 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8X9_9CRUS)

HSP 1 Score: 68.9 bits (167), Expect = 1.200e-8
Identity = 44/154 (28.57%), Postives = 71/154 (46.10%), Query Frame = 0
Query:  386 SRLQCPICSIELRNEGNLKRHLETVHKDVPD----QFICHHCPASFSSDRARSIHTMRIHSIPQDLPAEGG-------------ISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVHEMTH 522
            S  +C +C I L++E  L+ H E  H D       +  C  C A  S++    +H  ++HS   D+    G             +S ++ K+       PK H CS C Y ++ K  + RH+  +HL LR + CN C+KKF +  +  +H + H
Sbjct:  178 SNFKCSVCDIVLQSEDALREH-ERSHADKNGLNNYEVQCFVCSAILSTNIGLKLHIAQMHS---DIVKGKGDKHFLCSICSKKFVSCNHLKQHMKTHTAPKAHHCSQCSYSAQNKEAVRRHVNRIHLKLRKYECNMCNKKFFSQPDRKLHMLRH 327          
BLAST of Gvermi12341.t1 vs. uniprot
Match: A0A0L7LPE8_9NEOP (Putative zinc finger protein n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7LPE8_9NEOP)

HSP 1 Score: 68.6 bits (166), Expect = 1.950e-8
Identity = 45/162 (27.78%), Postives = 65/162 (40.12%), Query Frame = 0
Query:  357 VQCSECGEGYGNIASWKRHASRAHRVDQASRLQCPICSIELRNEGNLKRHLETVHKDVPDQFICHHCPASFSSDRARSIHTMRIHSIPQDLPAEGGISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVH 518
            V+C  CG  +GN  S   H   AH + Q+    C  C         LK H E  H++     +C  C   F +      H  R   +P+ +       +S                CS CE        +S H+  VHL ++P++C+ CDK+F TA NL  H
Sbjct:  520 VKCGPCGTKFGNKFSLNEHTKYAHVLFQSDYRACKTCGRGFAKAHKLKHH-EKQHRNK----VCPLCDKIFKTQSYFDTHMQR--HVPKLIVLNKKYEQS----------------CSFCEKECSNDNQLSLHVNKVHLQIKPYSCDMCDKQFYTAYNLRYH 658          
BLAST of Gvermi12341.t1 vs. uniprot
Match: A0A7E5WTH0_TRINI (myoneurin-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WTH0_TRINI)

HSP 1 Score: 67.0 bits (162), Expect = 3.050e-8
Identity = 42/143 (29.37%), Postives = 63/143 (44.06%), Query Frame = 0
Query:  393 CSIELRNEGNLKRHLETVHKDVPDQ-FICHHCPASFSSDRARSIHTMRIHSIPQ------------DLPAEGGISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVHEMTH 522
            C ++ +++  L++H +  HKD+ ++  IC  C   F+      +H +  H   Q                         KR R      K H C HC+Y S  K ++  H+  VHL +RPF C+ C K F   SNLT H +TH
Sbjct:  141 CDMKFKSKTLLQKHNKITHKDIKNEAIICDICGKIFNKSSTLKVH-LSCHKEKQCPXXXXXXXXXXXXXXXXXXXXQQLKRKRIV----KYHLCVHCDYRSLNKNSLEAHMNKVHLNIRPFVCDICQKGFYKKSNLTQHYVTH 278          
BLAST of Gvermi12341.t1 vs. uniprot
Match: UPI0006766945 (gastrula zinc finger protein XlCGF52.1-like isoform X1 n=1 Tax=Papilio polytes TaxID=76194 RepID=UPI0006766945)

HSP 1 Score: 64.3 bits (155), Expect = 2.340e-7
Identity = 41/160 (25.62%), Postives = 69/160 (43.12%), Query Frame = 0
Query:  359 CSECGEGYGNIASWKRHASRAHRVDQASRLQCPICSIELRNEGNLKRHLETVHKDVPDQFICHHCPASFSSDRARSIHTMRIHSIPQDLPAEGGISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVH 518
            C++C   + +    K H +  H  + ++   C +C    +   +L+ H    HK++        CP  F + ++ S + + I              K N KR+R        + C +C+Y S  K  +  HI  +HL +RP+ C  CDK F   S+LT H
Sbjct:  147 CTKCDIKFNSNELLKDHKNCFHN-NNSNATVCDVCGQTFKTPTSLRAH-SNCHKEIE-------CPYCFKTLKSHSYYRIHIKR-----------HKMNIKRVRNKV----YYNCLNCKYQSLNKNTLEAHINKMHLHIRPYVCETCDKGFYKKSHLTEH 282          
BLAST of Gvermi12341.t1 vs. uniprot
Match: UPI000679DC35 (zinc finger protein 667-like n=1 Tax=Papilio xuthus TaxID=66420 RepID=UPI000679DC35)

HSP 1 Score: 63.5 bits (153), Expect = 4.110e-7
Identity = 45/166 (27.11%), Postives = 70/166 (42.17%), Query Frame = 0
Query:  356 IVQCSECGEGYGNIASWKRHASRAHRVDQASRLQCPICSIELRNEGNLKRHLETVHKDVPDQFICH---HCPASFSSDRARSIHTMRIHSIPQDLPAEGGISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVH 518
            I  C +C   + +    + H +  H+  +A+   C +C  +L++  +LK H+            CH    CP  F + +  S + + I               SN KR R        + CS+C Y S  K  +  HI  +HL +RP+ C  CDK F   S+LT H
Sbjct:  143 IFNCIKCDIKFISNDLLQEHKNSFHKKSEAT--ICDVCGQKLKSPTSLKAHIN-----------CHKVKECPYCFKTLKCHSHYNIHIKR-----------HTSNVKRKRNKL----YYTCSNCNYQSLNKKTLEAHINRIHLHIRPYVCETCDKGFYKNSHLTEH 280          
BLAST of Gvermi12341.t1 vs. uniprot
Match: UPI000C142487 (zinc finger and BTB domain-containing protein 24-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C142487)

HSP 1 Score: 63.2 bits (152), Expect = 5.200e-7
Identity = 39/148 (26.35%), Postives = 59/148 (39.86%), Query Frame = 0
Query:  384 QASRLQCPICSIELRNEGNLKRHLETVHKDVPDQFICHHCPASFSSDRARSIHTMRIHSIPQDLPAEGGISKS-------NGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVHEMTHER 524
            + S LQC  C ++  ++  L+RH +  HK+     IC  C   F+   A                               N   +       K + C  C+Y S  K  +  HI  +HL +RP+ C+ C K F   S+LT H +THE+
Sbjct:  132 ELSSLQCSECDMKFNSKVLLQRHFKMTHKNTNKANICDICGKVFNRSSALKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHSTLTKRKRLIKYYTCDSCDYRSLNKNTLEAHINKIHLNIRPYICDICQKGFYKKSHLTQHFLTHEK 279          
BLAST of Gvermi12341.t1 vs. uniprot
Match: A0A194Q758_PAPXU (Zinc finger protein 595 n=1 Tax=Papilio xuthus TaxID=66420 RepID=A0A194Q758_PAPXU)

HSP 1 Score: 62.4 bits (150), Expect = 5.800e-7
Identity = 44/166 (26.51%), Postives = 70/166 (42.17%), Query Frame = 0
Query:  356 IVQCSECGEGYGNIASWKRHASRAHRVDQASRLQCPICSIELRNEGNLKRHLETVHKDVPDQFICH---HCPASFSSDRARSIHTMRIHSIPQDLPAEGGISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVH 518
            I  C +C   + +    + H +  H+  +A+   C +C  +L++  +LK H+            CH    CP  F + +  S + + I               SN KR R        + C++C Y S  K  +  HI  +HL +RP+ C  CDK F   S+LT H
Sbjct:   52 IFNCIKCDIKFISNDLLQEHKNSFHKKSEAT--ICDVCGQKLKSPTSLKAHIN-----------CHKVKECPYCFKTLKCHSHYNIHIKR-----------HTSNVKRKRNKL----YYTCNNCNYQSLNKKTLEAHINRIHLHIRPYVCETCDKGFYKNSHLTEH 189          
BLAST of Gvermi12341.t1 vs. uniprot
Match: A0A5N5T4S1_9CRUS (Zinc finger protein (Fragment) n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T4S1_9CRUS)

HSP 1 Score: 62.4 bits (150), Expect = 1.510e-6
Identity = 46/156 (29.49%), Postives = 65/156 (41.67%), Query Frame = 0
Query:  390 CPICSIELRNEGNLKRHLETVHKDVPDQFICHHCPASFSSDRARSIHTMRIHSI-PQDLPAEG----------------GISKS---NGKRIRT-----AAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVHEM 520
            CP C  + +++G+L +H++  H +    + C  C A FS     S HT+      P   P  G                G+  S   NG  +        A     HKC  C Y SK++ +I RHI   H   +PFAC  CDK+F    NL  H +
Sbjct:  144 CPRCPYKTKSKGHLHQHIKIKHLNSRP-YPCTICGARFSMKIDLSRHTLTHTGFKPHKCPRCGKGFIRNDRMLILGGCQGLESSLVDNGDLLNVDPDTFEADGDLKHKCPFCNYKSKFRPHIRRHIMFKHTKEKPFACTACDKRFANKENLLRHTL 298          
BLAST of Gvermi12341.t1 vs. uniprot
Match: A0A5N5TAW3_9CRUS (Zinc finger protein 84 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5TAW3_9CRUS)

HSP 1 Score: 61.2 bits (147), Expect = 2.090e-6
Identity = 45/156 (28.85%), Postives = 66/156 (42.31%), Query Frame = 0
Query:  390 CPICSIELRNEGNLKRHLETVHKDVPDQFICHHCPASFSSDRARSIHTM-----RIHSIPQ---------DLPAEGGISK------SNGKRIRT-----AAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVHEM 520
            CP C  + +++G+L +H++  H +    + C  C A FS     S HT+     + H  P+          +   GG          NG  +        A     HKC  C Y SK++ +I RHI   H   +PFAC  CDK+F    NL  H +
Sbjct:   90 CPRCPYKTKSKGHLHQHIKIKHLNSRP-YPCTICGARFSMKIDLSRHTLTHTGFKPHKCPRCGKGFIRNDRMLILGGCQGLESPLVDNGDLLNVDPDTFEADGDLKHKCPFCNYKSKFRPHIRRHIMFKHTKEKPFACTACDKRFANKENLLRHTL 244          
BLAST of Gvermi12341.t1 vs. uniprot
Match: A0A6J1N8U4_BICAN (zinc finger protein 569-like isoform X3 n=1 Tax=Bicyclus anynana TaxID=110368 RepID=A0A6J1N8U4_BICAN)

HSP 1 Score: 62.0 bits (149), Expect = 2.210e-6
Identity = 48/198 (24.24%), Postives = 86/198 (43.43%), Query Frame = 0
Query:  325 RYIAPSPNGEGGLTEAFLAQITARAFQYEDGIVQCSECGEGYGNIASWKRHASRAHRVDQASRLQCPICSIELRNEGNLKRHLETVHKDVPDQFICHHCPASFSSDRARSIHTMRIHSIPQDLPAEGGISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPFACNECDKKFNTASNLTVHEMTH 522
            RY  P  N +  +++ FL +   +  Q +   V+C+ C   + +  S   H   AH +     + C  C     N   +K H ++ H+ + D   C  C   F   +   IH  R H+I          +    + ++T         CS C+     +  +S H+  VHL ++P++C+ CD++F T +NL+ H+  H
Sbjct:  524 RYTCPFCN-KHFISDYFLKKHILKHIQRK---VECNICLHYFNSKFSLFEHKKAAHILQLEEYMTCKCCGRTFSNIKKMKSHQKS-HR-IKD---CQLCDKLFLLQKHYDIHMQR-HAIK--------FNAYKNEDVQT---------CSFCQKACSNENELSLHVNKVHLQMKPYSCDMCDRQFYTETNLSSHKKLH 694          
The following BLAST results are available for this feature:
BLAST of Gvermi12341.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6A7G8X9_9CRUS1.200e-828.57Zinc finger protein 510 (Fragment) n=2 Tax=Hironde... [more]
A0A0L7LPE8_9NEOP1.950e-827.78Putative zinc finger protein n=1 Tax=Operophtera b... [more]
A0A7E5WTH0_TRINI3.050e-829.37myoneurin-like n=1 Tax=Trichoplusia ni TaxID=7111 ... [more]
UPI00067669452.340e-725.63gastrula zinc finger protein XlCGF52.1-like isofor... [more]
UPI000679DC354.110e-727.11zinc finger protein 667-like n=1 Tax=Papilio xuthu... [more]
UPI000C1424875.200e-726.35zinc finger and BTB domain-containing protein 24-l... [more]
A0A194Q758_PAPXU5.800e-726.51Zinc finger protein 595 n=1 Tax=Papilio xuthus Tax... [more]
A0A5N5T4S1_9CRUS1.510e-629.49Zinc finger protein (Fragment) n=1 Tax=Armadillidi... [more]
A0A5N5TAW3_9CRUS2.090e-628.85Zinc finger protein 84 n=1 Tax=Armadillidium nasat... [more]
A0A6J1N8U4_BICAN2.210e-624.24zinc finger protein 569-like isoform X3 n=1 Tax=Bi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 517..537
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 354..416
e-value: 2.3E-8
score: 35.9
coord: 417..497
e-value: 3.5E-5
score: 25.7
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 498..523
e-value: 1.7E-8
score: 36.5
NoneNo IPR availablePFAMPF13909zf-H2C2_5coord: 471..494
e-value: 3.1E-8
score: 33.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..549
NoneNo IPR availablePANTHERPTHR24406TRANSCRIPTIONAL REPRESSOR CTCFL-RELATEDcoord: 467..526
coord: 217..438
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 418..441
e-value: 3.0
score: 16.9
coord: 471..494
e-value: 0.016
score: 24.4
coord: 388..411
e-value: 0.0089
score: 25.2
coord: 357..380
e-value: 5.1
score: 15.8
coord: 500..522
e-value: 0.0019
score: 27.5
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 500..522
e-value: 2.5E-5
score: 24.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 359..380
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 420..441
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 390..411
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 502..522
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 471..499
score: 9.431686
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 500..527
score: 13.151861
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 469..522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4277952..4279601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12341.t1Gvermi12341.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4277952..4279601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12341.t1 ID=Gvermi12341.t1|Name=Gvermi12341.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=550bp
MNTNPTQSGLNSGSAPLPSTLPTTQTTRGLPQPSFYAPPYNASQPMNPPV
SIPLQSSVPSRSLYHPQGSYVVHGPVIPNYSSGEEVRCLPSVRSIVSAIN
LERHSAYSMPSYQVPHATTHEANGWSTVQHGHAPAVAAIYNHPYSSHGYP
SQYVNHPYSTLPTTQIQAPHTRVEAAPNRQASHAAPPPPPLESNITSHYT
NMHTTAVDARTPAAIPYSHGAMANNRVQIHNLYESMDNGHSQPHPGAFRC
HTEHQGYFQNTDLGPHGQIPPAISNPPRAAQSARDELRTATPPVPAHDAY
RTHAIQQSVSDPLHNGDSDNDESGRYIAPSPNGEGGLTEAFLAQITARAF
QYEDGIVQCSECGEGYGNIASWKRHASRAHRVDQASRLQCPICSIELRNE
GNLKRHLETVHKDVPDQFICHHCPASFSSDRARSIHTMRIHSIPQDLPAE
GGISKSNGKRIRTAAPKPKMHKCSHCEYVSKWKGNISRHIKSVHLALRPF
ACNECDKKFNTASNLTVHEMTHERDRERNRLQANERESDDNRERGRQEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf