Gvermi12348.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12348.t1
Unique NameGvermi12348.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length244
Homology
BLAST of Gvermi12348.t1 vs. uniprot
Match: A0A2V3IIU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU4_9FLOR)

HSP 1 Score: 269 bits (688), Expect = 6.030e-88
Identity = 135/235 (57.45%), Postives = 180/235 (76.60%), Query Frame = 0
Query:    9 AFASSAIYTSQAQCFNKIICCTSNRLVVHRLSRRPRLAVYCTASDTPTKSVKILERQVRIDSNTSDDKAREVLVSIKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSHLEKRGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDHVIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEAIKGHYVPISE 243
            AFA S+++T +   F++     S ++ +H+  RRPR A  C ASDTPT+   IL+++V + S+   DK R+V +++KAE++GGRRRRVSGSV+VE+ ++RVW VIT+Y K+HLY+PNI+ S ++ R   LYLDQ G+ISRKL+L +R+L+R++ED +QR +TFSRVEGR+F EFEGRY L E    VIV YDLVA PFPLFPMWMVERKT KE+P+MLAAIREEAI G +VP  E
Sbjct:    9 AFAPSSLFTPRFAHFSQKTTHASPQIRLHQAPRRPRPAFTCAASDTPTQPRVILDQKVCVQSDLPLDKTRQVHIALKAEDLGGRRRRVSGSVRVESTIDRVWHVITSYAKMHLYIPNIVESTVQHRNNVLYLDQIGVISRKLALKTRMLMRVTEDLAQRCITFSRVEGRDFSEFEGRYFLTEDEGQVIVSYDLVAVPFPLFPMWMVERKTFKEVPRMLAAIREEAIVGKHVPFEE 243          
BLAST of Gvermi12348.t1 vs. uniprot
Match: A0A1X6P0P5_PORUM (Polyketide_cyc domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0P5_PORUM)

HSP 1 Score: 144 bits (362), Expect = 4.170e-38
Identity = 76/157 (48.41%), Postives = 112/157 (71.34%), Query Frame = 0
Query:   82 VSIKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSHLEK--RGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDH--VIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEAI 234
            V ++ E +GGRRRR+SG + +E P+ RVW V+T Y ++H ++PNI++S + +   GE L LDQTG+ISR+L L SR+++R++E   Q ++TFSRV GR+F  FEG Y+ +E  D     ++Y L A P   FP+ +VERK +KE+PK+LAAIR EA+
Sbjct:  137 VHLRLEALGGRRRRMSGGIFIEAPLPRVWAVLTQYARMHEFLPNIVSSAVSEGAAGETL-LDQTGIISRRLQLKSRMVMRVTE-VPQSTITFSRVTGRDFTAFEGVYLFREAADAGGCQLDYSLDAVPMAFFPVALVERKIVKEMPKILAAIRREAL 291          
BLAST of Gvermi12348.t1 vs. uniprot
Match: A0A7S0QK05_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QK05_9CRYP)

HSP 1 Score: 122 bits (306), Expect = 6.540e-31
Identity = 64/158 (40.51%), Postives = 101/158 (63.92%), Query Frame = 0
Query:   82 VSIKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSHLEKRGE-HLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPD-HVIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEAIKGH 237
            V I+ E +GG RRR+SG + +E P   VW V+T Y  +  Y+PNI  S    + +  + ++Q G+IS+ L+L +R++L ++E+   R +TF++VE REF EFEG Y + E  D    ++Y + A P PL P+++V+ K  +E+P MLAA+R  AI+ H
Sbjct:   34 VFIRLEGLGGSRRRISGGLHIEAPPRAVWDVLTNYSALSEYIPNIAESGSRVQPDGRVRIEQVGVISQSLNLRTRIVLEVTEE-PCRLLTFTKVESREFIEFEGTYAIAERQDGRTFLQYSVDALPHPLLPVFLVQSKIQQEVPPMLAAVRAIAIRRH 190          
BLAST of Gvermi12348.t1 vs. uniprot
Match: L1JG99_GUITC (Polyketide_cyc domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JG99_GUITC)

HSP 1 Score: 124 bits (310), Expect = 7.270e-31
Identity = 67/159 (42.14%), Postives = 101/159 (63.52%), Query Frame = 0
Query:   82 VSIKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSH--LEKRGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPD-HVIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEAIKGH 237
            ++IK E +GG RRR+SG + +E P   +W V+T Y+ +H Y+PNI  S   L+  G  + ++Q G+IS  L +T+R++L ++E+  QR + FS+VE REF EFEG Y +    D    +EY + A P P+ P+ +V+ K  KE+P MLAA+R  A K H
Sbjct:   20 INIKLEGLGGSRRRISGGLFIEAPPRAIWDVLTNYNNLHEYIPNIAESGAILQPNGR-VRIEQVGVISPTLRITTRIVLEVTEEPFQR-LKFSKVESREFIEFEGIYSITSCKDGRAYLEYSVEALPLPILPIQLVQGKIKKEVPPMLAAVRTNANKYH 176          
BLAST of Gvermi12348.t1 vs. uniprot
Match: A0A7S0XQK2_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQK2_HEMAN)

HSP 1 Score: 117 bits (294), Expect = 2.500e-28
Identity = 64/157 (40.76%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   82 VSIKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSH--LEKRGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDH---VIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEA 233
            V IK E +GG RRR+SG + +E P   +W  +T Y+K++ Y+PNI  S   L+  G+ + ++Q G+IS  L+L +R++L + ED   R++TFS+VE REF EF+G Y + E         +EY + A P PL P+ +V+ K   E+P ML+A+R  A
Sbjct:  106 VDIKLEGLGGNRRRISGGLFIEAPPRAIWDTLTNYNKLNEYIPNIAESGAMLQPNGK-VRIEQVGVISPTLNLKTRIVLEVDED-PYRTLTFSKVESREFIEFQGTYSISEPEKEGGLAYLEYSVEALPHPLLPVGLVQGKIRAEVPPMLSAVRTNA 260          
BLAST of Gvermi12348.t1 vs. uniprot
Match: A0A7S0W4P5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W4P5_9CRYP)

HSP 1 Score: 115 bits (287), Expect = 3.440e-28
Identity = 62/157 (39.49%), Postives = 97/157 (61.78%), Query Frame = 0
Query:   82 VSIKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSH--LEKRGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDH---VIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEA 233
            V IK E +GG RRR+SG + +E P   +W  +T Y+K+H Y+PNI  S   L+  G+ + ++Q G+IS  L L +R+ L++ E+   R++TF++V+ REF EFEG Y +   P       ++Y + A P PL P+ +V+ K   E+P ML+A+R  A
Sbjct:   24 VDIKLEGLGGNRRRISGGLYIEAPPRAIWDTLTNYNKLHEYIPNIAESGAMLQPDGK-VRIEQVGVISPTLGLKTRITLQVEEE-PYRTLTFTKVQSREFLEFEGTYTITSPPSGGGMAYLKYIVEALPHPLLPVGLVQGKIRAEVPPMLSAVRASA 178          
BLAST of Gvermi12348.t1 vs. uniprot
Match: M2W8X6_GALSU (Polyketide_cyc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W8X6_GALSU)

HSP 1 Score: 116 bits (290), Expect = 5.260e-28
Identity = 59/157 (37.58%), Postives = 102/157 (64.97%), Query Frame = 0
Query:   82 VSIKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSH-LEKRGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDHVI-VEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEAIKG 236
            + ++  ++GGR+RR+SG + +E P++RVW ++T Y+K+   +PNI+ S  +     +  ++Q  L+SR  ++ SR+L+ + ED+  +++ F +++ R+F EF+G Y   E       +EY L A P  LFP+ +VERK LKE+P++LA IRE A+ G
Sbjct:   86 IKVRLTSLGGRKRRISGGLDIEAPVKRVWDIMTDYEKLPDILPNIVESRVIHDTVGNKQVEQVILLSRTFNIRSRILVEVLEDY-MKALRFLKIQSRDFEEFDGNYRFSEIESGFCRMEYSLDASPNLLFPISLVERKILKEVPQLLANIREVALYG 241          
BLAST of Gvermi12348.t1 vs. uniprot
Match: A0A7S1EIX8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIX8_HEMAN)

HSP 1 Score: 108 bits (269), Expect = 7.850e-26
Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 0
Query:   91 GRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSH--LEKRGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDH---VIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEA 233
            G RRR+SG + +E P   +W  +T Y+K++ Y+PNI  S   L+  G+ + ++Q G+IS  L+L +R++L + ED   R++TFS+VE REF EF+G Y + E         +EY + A P PL P+ +V+ K   E+P ML+A+R  A
Sbjct:    1 GNRRRISGGLFIEAPPRAIWDTLTNYNKLNEYIPNIAESGAMLQPNGK-VRIEQVGVISPTLNLKTRIVLEVDED-PYRTLTFSKVESREFIEFQGTYSISEPEKEGGLAYLEYSVEALPHPLLPVGLVQGKIRAEVPPMLSAVRTNA 146          
BLAST of Gvermi12348.t1 vs. uniprot
Match: M1VE17_CYAM1 (Polyketide_cyc domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VE17_CYAM1)

HSP 1 Score: 92.4 bits (228), Expect = 8.430e-19
Identity = 50/151 (33.11%), Postives = 86/151 (56.95%), Query Frame = 0
Query:   84 IKAENMGGRRRRVSGSVKVETPMERVWKVITAYDKIHLYMPNILTSHLEKRGEHLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRY-VLKEGPDHVIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEA 233
            ++  ++  RRR ++GS+ V  P   VW V+TA+D++  ++P++L+S  +       L+Q   +SR+L L SRL++ +     Q  + FS+ E R+F  ++G Y ++        +EY L   P  LFP+ +VERK +KE+P +L A    A
Sbjct:  105 VELRSLDSRRRLITGSLNVFAPKAHVWTVLTAFDEMIEFVPHMLSSRFDTESR--LLEQVAWVSRRLRLQSRLVMEVEMLPEQGELLFSKRESRDFASWKGVYRIVPRSETETRLEYALDVVPMILFPIALVERKIMKEVPGVLRAFAARA 253          
BLAST of Gvermi12348.t1 vs. uniprot
Match: A0A7S3B045_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B045_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 1.200e-14
Identity = 43/124 (34.68%), Postives = 74/124 (59.68%), Query Frame = 0
Query:  115 AYDKIHLYMPNILTSHLEKRGE-HLYLDQTGLISRKLSLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDH-VIVEYDLVAQPFPLFPMWMVERKTLKEIPKMLAAIREEAIKG 236
            AY++    +P+IL+  + ++ +  +Y+DQ  L+S KL+L + + L+  ED  + ++   RV G  F EF+  Y L   P    ++ Y +   P P+FP+ +VERK  KE+PKMLAA+ + A++ 
Sbjct:    1 AYEEQPDLIPSILSHQVSRQPDGRVYIDQMSLLSSKLNLRTEMRLQAIEDRDRLTLAVRRVSGHGFLEFDAMYRLTPRPGGGTMLRYSVELVPCPIFPLPLVERKVRKEVPKMLAAVSDIAMRS 124          
The following BLAST results are available for this feature:
BLAST of Gvermi12348.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIU4_9FLOR6.030e-8857.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P0P5_PORUM4.170e-3848.41Polyketide_cyc domain-containing protein (Fragment... [more]
A0A7S0QK05_9CRYP6.540e-3140.51Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
L1JG99_GUITC7.270e-3142.14Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
A0A7S0XQK2_HEMAN2.500e-2840.76Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0W4P5_9CRYP3.440e-2839.49Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
M2W8X6_GALSU5.260e-2837.58Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
A0A7S1EIX8_HEMAN7.850e-2639.86Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
M1VE17_CYAM18.430e-1933.11Polyketide_cyc domain-containing protein n=2 Tax=c... [more]
A0A7S3B045_9EUKA1.200e-1434.68Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 95..235
e-value: 1.7E-14
score: 55.8
IPR005031Coenzyme Q-binding protein COQ10, START domainPFAMPF03364Polyketide_cyccoord: 102..228
e-value: 1.1E-6
score: 28.8
NoneNo IPR availablePANTHERPTHR34060POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEINcoord: 37..233
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..243
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 95..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4301451..4302182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12348.t1Gvermi12348.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4301451..4302182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12348.t1 ID=Gvermi12348.t1|Name=Gvermi12348.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=244bp
MSIVRNSTAFASSAIYTSQAQCFNKIICCTSNRLVVHRLSRRPRLAVYCT
ASDTPTKSVKILERQVRIDSNTSDDKAREVLVSIKAENMGGRRRRVSGSV
KVETPMERVWKVITAYDKIHLYMPNILTSHLEKRGEHLYLDQTGLISRKL
SLTSRLLLRISEDFSQRSVTFSRVEGREFPEFEGRYVLKEGPDHVIVEYD
LVAQPFPLFPMWMVERKTLKEIPKMLAAIREEAIKGHYVPISE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR005031COQ10_START