Gvermi12112.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12112.t1
Unique NameGvermi12112.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length209
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi12112.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..190
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..34
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3445766..3446392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12112.t1Gvermi12112.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3445766..3446392 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12112.t1 ID=Gvermi12112.t1|Name=Gvermi12112.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=209bp
MSDAVLIDLHRPLTQYDSPSPPRPPPRPHPFRQHALWAAAALFFSAYLAL
VLFLFLTSDAFRHFVVARANALFALPYVLSLLVVLLCLAPCAPAPPRAQL
DAVITTPADCCLVLLVLLEWATCLALVLVTLIAVHDHLSYVSPDGLIVPV
VQDVPPDAKPADGISRNALIVLLVPLLLMYTLFNFLLHFFSCAQAAWRSW
VGLDDSDV*
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