Gvermi871.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi871.t1
Unique NameGvermi871.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length166
Homology
BLAST of Gvermi871.t1 vs. uniprot
Match: A0A2V3IYT6_9FLOR (Alba domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYT6_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 7.980e-38
Identity = 79/138 (57.25%), Postives = 102/138 (73.91%), Query Frame = 0
Query:   24 AVESKPQPAPQQNGRACRRIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEATKGHSSTPKAKIQIWLSHVDEVHEQDNCTNKRVDSSPEHAGDTNPRVNSD-DVPT 160
            A    PQP   Q     RRIQVSREKRP+ FF++LA+K LN++S +ELSGLGLAV NV+TIAE+LR  G A ID+I+TSLVE TKGHS++ K KIQIWLS   E +   NCT+K+ +++ +HAG+TNP  +S+  VPT
Sbjct:   42 AAAQPPQPHTTQRQSPPRRIQVSREKRPLSFFISLARKSLNANSTVELSGLGLAVSNVITIAEVLRADGRAHIDDIQTSLVEPTKGHSTSSKPKIQIWLSRA-EPNAPANCTDKQAEAASDHAGNTNPPESSNATVPT 178          
BLAST of Gvermi871.t1 vs. uniprot
Match: A0A1X6PJ30_PORUM (Alba domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJ30_PORUM)

HSP 1 Score: 95.9 bits (237), Expect = 2.690e-21
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 0
Query:   42 RIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEATK-GHSSTPKAKIQIWLSHVDE 127
            RIQVSREKRP++FF+ L+KKFL ++ ++ELSGLGLAV  VVT+AE+L+ +G   I  I TSLV+  + G S+ PKAKIQIW+   D+
Sbjct:   91 RIQVSREKRPLNFFIGLSKKFLVNEEEVELSGLGLAVTTVVTVAEILKSSGYVDIVRIETSLVDMREEGRSTLPKAKIQIWIRKSDQ 177          
BLAST of Gvermi871.t1 vs. uniprot
Match: K3ZAP5_SETIT (Alba domain-containing protein n=6 Tax=Paniceae TaxID=147428 RepID=K3ZAP5_SETIT)

HSP 1 Score: 76.6 bits (187), Expect = 6.830e-15
Identity = 49/102 (48.04%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   32 APQQNGRACRRIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEAT---KGHSSTPKAKIQIWLSHVDEVHE 130
            A QQ   A  RIQVS  K+P+ F+V LAKK++     +ELS LGLA+  VVTIAE+L+  G+A   +IRTS VE +   +GHS   KAKI+I L   +   E
Sbjct:   16 AQQQKPGAGNRIQVSSSKKPLFFYVNLAKKYMQQHGDVELSALGLAISTVVTIAEILKNNGLAVEKKIRTSTVEISDEMRGHS-IQKAKIEIVLGKTENFDE 116          
BLAST of Gvermi871.t1 vs. uniprot
Match: A0A1E5VN35_9POAL (Alba domain-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VN35_9POAL)

HSP 1 Score: 74.3 bits (181), Expect = 5.320e-14
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   32 APQQNGRACRRIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEATKGHSSTP--KAKIQIWLSHVDEVHE 130
            A QQ      RIQVS  K+P+ F+V LAK+++     +ELS LGLA+  VVTIAE+L+  G+A   +IRTS VE +      P  KAKI+I L   D+  E
Sbjct:   16 ARQQKADTGNRIQVSSSKKPLFFYVNLAKRYMQQHGSVELSALGLAISTVVTIAEILKNNGLAVEKKIRTSTVEISDEMRGRPIQKAKIEIVLGKTDKFDE 116          
BLAST of Gvermi871.t1 vs. uniprot
Match: C5Z151_SORBI (Alba domain-containing protein n=3 Tax=Andropogoneae TaxID=147429 RepID=C5Z151_SORBI)

HSP 1 Score: 73.6 bits (179), Expect = 1.050e-13
Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   42 RIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEATKGHSSTP--KAKIQIWLSHVDEVHE 130
            RIQVS  K+P+ F+V LAKK++     +ELS LGLA+  VVTIAE+L+  G+A   +IRTS VE      + P  KAKI+I L   D+  E
Sbjct:   26 RIQVSSSKKPLFFYVNLAKKYMQQHGDVELSALGLAISTVVTIAEILKNNGLAVEKKIRTSTVEIIDETKARPIQKAKIEIVLGKTDKFEE 116          
BLAST of Gvermi871.t1 vs. uniprot
Match: A0A835KG31_9POAL (Alba domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835KG31_9POAL)

HSP 1 Score: 72.0 bits (175), Expect = 4.330e-13
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   43 IQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEA---TKGHSSTPKAKIQIWLSHVDEVHE 130
            IQVS  K+P+ F+V LAKK++     +ELS LGLA+  VVTIAE+L+  G+A   +IRTS VE    T+G S   KAKI+I L   D   E
Sbjct:   29 IQVSSSKKPLFFYVNLAKKYMQQHGDVELSALGLAISTVVTIAEILKNNGLAVEKKIRTSTVEIGDETRGRS-IQKAKIEILLGKTDNFDE 118          
BLAST of Gvermi871.t1 vs. uniprot
Match: B9IKV8_POPTR (Alba domain-containing protein n=12 Tax=Malpighiales TaxID=3646 RepID=B9IKV8_POPTR)

HSP 1 Score: 71.6 bits (174), Expect = 5.670e-13
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   42 RIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEATK--GHSSTPKAKIQIWLSHVDEVHE 130
            RIQVS  K+P+ F+V LAK+++   +++ELS LG+A+  VVTIAE+L+  G+A   +I TS V+  +  G    PKAKI+I L   ++  E
Sbjct:   26 RIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKNNGLAVEKKITTSTVDMREETGGRPVPKAKIEILLGKTEKFDE 116          
BLAST of Gvermi871.t1 vs. uniprot
Match: B9RP66_RICCO (Alba domain-containing protein n=1 Tax=Ricinus communis TaxID=3988 RepID=B9RP66_RICCO)

HSP 1 Score: 71.2 bits (173), Expect = 7.090e-13
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   42 RIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEATK--GHSSTPKAKIQIWLSHVDEVHE 130
            RIQVS  K+P+ F+V LAK+++   +++ELS LG+A+  VVTIAE+L+  G+A   +I TS V+  +  G    PKAKI+I L   ++  E
Sbjct:   22 RIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKNNGLAIEKKIMTSTVDMREDTGGRPVPKAKIEILLGKTEKFDE 112          
BLAST of Gvermi871.t1 vs. uniprot
Match: A0A2P6PXW3_ROSCH (Putative DNA/RNA-binding protein Alba n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PXW3_ROSCH)

HSP 1 Score: 71.2 bits (173), Expect = 7.260e-13
Identity = 41/91 (45.05%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   42 RIQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTSLVEATKGHSSTP--KAKIQIWLSHVDEVHE 130
            RIQVS  K+P+ F+V LAKK++  ++++ELSGLG+A+  VVTIAE+L+  G+A   +I T  V+  +     P  KAKI+I L   D+  E
Sbjct:   23 RIQVSNTKKPLFFYVNLAKKYMQLNNEVELSGLGMAIATVVTIAEILKNNGLAVEKKIITKTVDMREDAGGRPIQKAKIEILLGKSDKFDE 113          
BLAST of Gvermi871.t1 vs. uniprot
Match: A0A7S0T1G7_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T1G7_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 7.270e-13
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0
Query:   43 IQVSREKRPIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIRTS---LVEATKGHSSTPKAKIQIWLSHVDEVHE 130
            IQVS  K+P+ F+V LAK+FL +   + LSGLG+AV  VVT+AE+L++ G+A +  I TS   +V+ T   +   KAKI+I L+     HE
Sbjct:   57 IQVSNTKKPLFFYVNLAKQFLGAHDTVHLSGLGMAVATVVTVAEILKKNGLAAVTRIGTSTVDMVDETNPDNEVQKAKIEIALTKTLNFHE 147          
The following BLAST results are available for this feature:
BLAST of Gvermi871.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYT6_9FLOR7.980e-3857.25Alba domain-containing protein n=1 Tax=Gracilariop... [more]
A0A1X6PJ30_PORUM2.690e-2157.47Alba domain-containing protein n=1 Tax=Porphyra um... [more]
K3ZAP5_SETIT6.830e-1548.04Alba domain-containing protein n=6 Tax=Paniceae Ta... [more]
A0A1E5VN35_9POAL5.320e-1445.54Alba domain-containing protein n=1 Tax=Dichantheli... [more]
C5Z151_SORBI1.050e-1348.35Alba domain-containing protein n=3 Tax=Andropogone... [more]
A0A835KG31_9POAL4.330e-1349.45Alba domain-containing protein n=1 Tax=Digitaria e... [more]
B9IKV8_POPTR5.670e-1343.96Alba domain-containing protein n=12 Tax=Malpighial... [more]
B9RP66_RICCO7.090e-1343.96Alba domain-containing protein n=1 Tax=Ricinus com... [more]
A0A2P6PXW3_ROSCH7.260e-1345.05Putative DNA/RNA-binding protein Alba n=1 Tax=Rosa... [more]
A0A7S0T1G7_9CHLO7.270e-1345.05Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 43..99
e-value: 3.0E-7
score: 30.1
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 40..145
e-value: 2.1E-24
score: 87.7
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 45..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..165
NoneNo IPR availablePANTHERPTHR31947:SF1DNA/RNA-BINDING PROTEIN ALBA 3coord: 34..130
IPR014560Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-relatedPANTHERPTHR31947DNA/RNA-BINDING PROTEIN ALBA 3coord: 34..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:751883..752456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi871.t1Gvermi871.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 751883..752456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi871.t1 ID=Gvermi871.t1|Name=Gvermi871.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=166bp
MAPSSTVVSVAPDDAALDTGAKLAVESKPQPAPQQNGRACRRIQVSREKR
PIHFFVALAKKFLNSDSQIELSGLGLAVVNVVTIAELLREAGIAKIDEIR
TSLVEATKGHSSTPKAKIQIWLSHVDEVHEQDNCTNKRVDSSPEHAGDTN
PRVNSDDVPTPSKTS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002775DNA/RNA-bd_Alba-like
IPR036882Alba-like_dom_sf
IPR014560UCP030333_Alba