Gvermi800.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi800.t1
Unique NameGvermi800.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length242
Homology
BLAST of Gvermi800.t1 vs. uniprot
Match: A0A2V3IYE7_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYE7_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 3.780e-90
Identity = 130/216 (60.19%), Postives = 162/216 (75.00%), Query Frame = 0
Query:   25 YRGYWEKTWRVPSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAWC 240
            +RG+WEKTW V S++F  AN GFAFSGHVD+++ LR+S+  +  L G KI+TIGGGN  G WTRR IR L+KAIRSG LN+Y GIAYDIEEG SGL   FLRSF  AK  GF V+V ++ TAPYGI D+ +LM  II SR++D+ISPIMYPS  NFQ C  RGGV++ T QNVPW W+  SRA +VPS+WR  +Y +A +FL+ +GI + GYI WC
Sbjct:   25 FRGHWEKTWDVSSTQFDSANFGFAFSGHVDVSRALRDSNAVFRNLEGKKILTIGGGNSNGAWTRRYIRKLNKAIRSGSLNSYHGIAYDIEEGQSGLTGDFLRSFWEAKRHGFFVLVTVSKTAPYGIRDARRLMWNIIHSRHVDVISPIMYPSGQNFQQCSDRGGVDFSTMQNVPWSWYRRSRAYVVPSLWRSSFYREAQSFLRGRGIVSYGYIVWC 240          
BLAST of Gvermi800.t1 vs. uniprot
Match: Q2W0C5_MAGSA (Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) TaxID=342108 RepID=Q2W0C5_MAGSA)

HSP 1 Score: 160 bits (406), Expect = 2.670e-44
Identity = 89/215 (41.40%), Postives = 118/215 (54.88%), Query Frame = 0
Query:   27 GYWEKTWR--VPSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAW 239
            GYW +TW   VP S    A LG AFSG  D    L +S+     L G K IT+GGGN  GR+T + +  ++ AI  G+  AY GIAYDIE GDSGL   F  +F LAK+ GFLV+V ++HTAPYGIGD+  LM        ID +SP +Y +        +    +  +   V W  +  +RAA++PSI     Y  A   L   G++T GY+ W
Sbjct:  128 GYWRRTWGACVPPSG---ATLGLAFSGWADPASALADSAAALSGLEGVKYITLGGGNDNGRFTAQDLDKINAAITGGQFAAYGGIAYDIENGDSGLASAFQGAFALAKANGFLVLVTVSHTAPYGIGDADTLMAAFFQDANIDFLSPQLYTN-----GDETANDYQITSGTTVTWAQYAKARAAVIPSIVTASLYPDAQQVLANHGVTTQGYVVW 334          
BLAST of Gvermi800.t1 vs. uniprot
Match: R7QQZ0_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ0_CHOCR)

HSP 1 Score: 157 bits (397), Expect = 9.740e-44
Identity = 90/214 (42.06%), Postives = 116/214 (54.21%), Query Frame = 0
Query:   27 GYWEKTWRVPSSR-FRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAW 239
            GY+  TW  P +     A +  AFSG  +    L  S   Y  L+G K I  GGG + GR+TR  I +++ AI  G L+ YSGI YD+E GDSGLR  F RSF LAKS GF V+V ++H+APYGIGD+  LM   + SR ID ISP +Y S   F +       +Y  S    W+ +  S   +V SI     YD A  + +  GI   GYI W
Sbjct:   58 GYYAWTWPYPPTPGLYSATMSVAFSGWTNARTALDRSKKVYPTLKGDKYIAFGGGTEPGRFTRAGITSINAAISGGLLSGYSGIVYDVEAGDSGLRGDFARSFALAKSYGFSVVVTVSHSAPYGIGDAGTLMDSFLSSRNIDYISPQLYTSGTEFSN-------DYSISSGYGWYKYQNSYPRVVVSIVHARLYDDAFKYFRNIGIPLSGYIQW 264          
BLAST of Gvermi800.t1 vs. uniprot
Match: UPI001ABAF294 (hypothetical protein n=2 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABAF294)

HSP 1 Score: 156 bits (394), Expect = 6.180e-43
Identity = 84/214 (39.25%), Postives = 125/214 (58.41%), Query Frame = 0
Query:   26 RGYWEKTWRVPSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAW 239
            +GYW+KTW  P + F  A LG AFSG  D+++ L +S+   ++L G K I++GGGN  GR+    I  +   I +G+L+ Y GIA+DIEE DSGL + F  +F  AK+    V+V ++H+APYG  D+  LM        ID +SP +Y S    Q+       +Y  S  V W  +  ++AA+VPSI +   Y+ A  F +++GI+T G+I W
Sbjct:   91 KGYWDKTWS-PGNPFTDATLGIAFSGWADLSQALSDSASVKNQLVGDKYISVGGGNANGRFDYSKIERIIAVINNGQLSDYKGIAFDIEECDSGLTQKFREAFATAKNNHLQVLVTVSHSAPYGAADAKDLMTAFFADGNIDYLSPQLYTSGNESQN-------DYTESMGVSWTDYAGAKAAMVPSIVQAGLYNDAKNFFQQRGINTKGFIQW 296          
BLAST of Gvermi800.t1 vs. uniprot
Match: A0A1Y5DHG2_9GAMM (Uncharacterized protein n=1 Tax=Marinomonas sp. 42_23_T18 TaxID=1856283 RepID=A0A1Y5DHG2_9GAMM)

HSP 1 Score: 154 bits (390), Expect = 6.330e-42
Identity = 87/216 (40.28%), Postives = 120/216 (55.56%), Query Frame = 0
Query:   27 GYWEKTWR---VPSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAW 239
            GYW+ TW+    PS+    A L  AFSG VD+   L +S+   + L G K I+ GGGN+ G +    + +L  AI  G L  Y GIAYD+EEG SGL   F  SF+ AK++GF V+V I+H+APY I D+  LM        IDI+SP +Y +    ++        Y TS  V W  +   +AAIVPS+  G  Y  A ++  +QG++  GYI W
Sbjct:  129 GYWDCTWQGGNAPSN----ATLSLAFSGWVDVKSALEDSNTVLNNLVGCKYISFGGGNENGAFDSANLADLTDAINQGALKQYDGIAYDVEEGVSGLEDDFKTSFKAAKAKGFNVLVTISHSAPYDISDASLLMDSFFDDANIDILSPQLYTTGEETEN-------NYETSHGVNWARYATCKAAIVPSLVTGSLYPSAQSYFSQQGVTLQGYIQW 333          
BLAST of Gvermi800.t1 vs. uniprot
Match: UPI00164AF8C8 (LysM domain-containing protein n=1 Tax=Undibacterium umbellatum TaxID=2762300 RepID=UPI00164AF8C8)

HSP 1 Score: 154 bits (390), Expect = 7.280e-42
Identity = 88/226 (38.94%), Postives = 123/226 (54.42%), Query Frame = 0
Query:   14 TIFRTSAVSTRYRGYWEKTWRVPSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAW 239
            TI  T +V+ + +G W  TW   +      NLG AFSG V     +  S+  + +L G K I +GGGN+ G WT   + ++  AI SG L+AY GIAYDIEEG SGL   F  SF  AK++G  V+V ++H+APYGI D+  LMR    S  IDI+SP +Y +     +       +Y TS  V W  +  ++A + PSI     Y  A  +   QG+S  G++ W
Sbjct:  123 TIPLTQSVNAQ-KGLWYWTWSKNTQVPDNTNLGIAFSGWVSPQTAIDNSNAVHSQLPGLKYICLGGGNESGAWTESAVLSVTNAINSGSLSAYQGIAYDIEEGSSGLAAAFEASFTAAKAKGLKVLVTVSHSAPYGIEDAAALMRSFFASPVIDILSPQLYTTGEETSN-------QYATSGGVSWSEYADAKAIVAPSIVNASLYADAQEYFLAQGVSLGGFLQW 340          
BLAST of Gvermi800.t1 vs. uniprot
Match: UPI00146A2EFB (LysM peptidoglycan-binding domain-containing protein n=2 Tax=unclassified Shewanella TaxID=196818 RepID=UPI00146A2EFB)

HSP 1 Score: 153 bits (386), Expect = 2.360e-41
Identity = 86/221 (38.91%), Postives = 121/221 (54.75%), Query Frame = 0
Query:   22 STRYRGYWEKTWR---VPSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAW 239
            +  YRGYW  T+    VP++    A +  AFSG  D+   L++S+ +   L G+K + +GGGN+ G +T   +  L  AI++G    Y GIAYD+EEG SGL   F  SF  AKS+GF V+V ++H+APYGI DS  LM+       ID +SP +Y S           G +Y TS  V W  +   +A IVPS+     YD A  +   QG+S  G++ W
Sbjct:  122 NAEYRGYWAWTYSQSAVPAN----ATMSMAFSGWADVQTALQDSAPKLAHLVGTKFLCVGGGNQSGAFTSANLTALTAAIQAGECVGYDGIAYDVEEGYSGLESLFTASFATAKSKGFKVLVTVSHSAPYGITDSAALMKSFFADANIDFLSPQLYTSG-------KETGNDYSTSHGVSWSDYAACKAKIVPSLVNASMYDAAKDYFAGQGVSIRGFVQW 331          
BLAST of Gvermi800.t1 vs. uniprot
Match: A0A1Q8ZZ87_9HYPH (LysM domain-containing protein n=2 Tax=Rhizobium taibaishanense TaxID=887144 RepID=A0A1Q8ZZ87_9HYPH)

HSP 1 Score: 145 bits (365), Expect = 3.610e-38
Identity = 84/214 (39.25%), Postives = 120/214 (56.07%), Query Frame = 0
Query:   27 GYWEKTWRVPSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQA-ATFLKEQGISTDGYIAW 239
            GYW+KTW   ++    A +G AFSG+ D +K L +S+     L G K IT+GGGN+ G ++  ++ +++ AIR G  +   GIAYD+EEG SGL   F  SF +AK+    V+V ++H+ P+G+ D+  LM        ID +SP +Y S        S    ++ TS  V W  +  ++AAIVPSI     YD A ATF   Q + T GYI W
Sbjct:  136 GYWDKTWHRVAAPAN-ATMGLAFSGYSDPSKALAQSATVIANLAGVKYITLGGGNQDGSFSVPILDSINSAIRHGAFSHCQGIAYDVEEGSSGLSAAFRNSFSIAKAASLSVLVTVSHSTPFGVADAKTLMASFFSDANIDFLSPQLYTSG-------SETSNDWATSGGVTWDAYKDAKAAIVPSITHANLYDNAQATFAHHQ-VKTAGYIVW 340          
BLAST of Gvermi800.t1 vs. uniprot
Match: A0A6C0CQ46_9ZZZZ (Ricin B-type lectin domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CQ46_9ZZZZ)

HSP 1 Score: 116 bits (290), Expect = 2.870e-26
Identity = 77/228 (33.77%), Postives = 117/228 (51.32%), Query Frame = 0
Query:   20 AVSTRYRGYWEKTWRV-------PSSRFRRANLGFAFSGHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRSGRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGIGDSY-QLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWWWFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAW 239
            A S    GY+ KT+         PSS      +G AFSG+VD      ES+   + + G K ++IGGGNKYGR+T   I   +  I   + + Y+G+ YDIE GD+GL + FL SF+LA++ G  V V +++ AP+ + D+  QLM  ++ S  ++ ISP++Y S     +  + G  E+   +N          + IV SI     Y  A +     GI+  GYI +
Sbjct:  301 APSAEMVGYYYKTFSSTADKAGPPSSMKGVLTMGIAFSGYVDYTNAELESNSVQNGIVGQKFLSIGGGNKYGRFTIASINAFNAKIPYIKGDGYTGLCYDIEIGDAGLTQAFLNSFQLARNNGLTVFVTVSYQAPFDVPDAKTQLMPALLASPNVNYISPMLYTSGCELVNNYAGGATEWGMWKNAV--------SKIVVSITSPSLYQDAVSHFNSFGITLHGYIVF 520          
The following BLAST results are available for this feature:
BLAST of Gvermi800.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IYE7_9FLOR3.780e-9060.19Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
Q2W0C5_MAGSA2.670e-4441.40Uncharacterized protein n=1 Tax=Magnetospirillum m... [more]
R7QQZ0_CHOCR9.740e-4442.06Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
UPI001ABAF2946.180e-4339.25hypothetical protein n=2 Tax=Aetokthonos hydrillic... [more]
A0A1Y5DHG2_9GAMM6.330e-4240.28Uncharacterized protein n=1 Tax=Marinomonas sp. 42... [more]
UPI00164AF8C87.280e-4238.94LysM domain-containing protein n=1 Tax=Undibacteri... [more]
UPI00146A2EFB2.360e-4138.91LysM peptidoglycan-binding domain-containing prote... [more]
A0A1Q8ZZ87_9HYPH3.610e-3839.25LysM domain-containing protein n=2 Tax=Rhizobium t... [more]
A0A6C0CQ46_9ZZZZ2.870e-2633.77Ricin B-type lectin domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..241
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:400236..400961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi800.t1Gvermi800.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 400236..400961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi800.t1 ID=Gvermi800.t1|Name=Gvermi800.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=242bp
MRVFLLLIFAFASTIFRTSAVSTRYRGYWEKTWRVPSSRFRRANLGFAFS
GHVDMNKVLRESSLRYDRLRGSKIITIGGGNKYGRWTRRVIRNLDKAIRS
GRLNAYSGIAYDIEEGDSGLRKHFLRSFRLAKSRGFLVIVAITHTAPYGI
GDSYQLMRYIIPSRYIDIISPIMYPSDINFQSCRSRGGVEYRTSQNVPWW
WFTYSRAAIVPSIWRGIYYDQAATFLKEQGISTDGYIAWCS*
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