Gvermi790.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi790.t1
Unique NameGvermi790.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length202
Homology
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BLAST of Gvermi790.t1 vs. uniprot
Match: A0A2V3IG86_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG86_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 1.990e-24
Identity = 58/203 (28.57%), Postives = 104/203 (51.23%), Query Frame = 0 
Query:    4 FNQHILCLLV-LASIHVIKASGTPRSCNGTEPGPIPEQSIGKTFRYLDDCYRPSATETVAVYRNLFVFTPIQPTLRVLGCFEKYAMHYRGPDTPPFISHFKAFAPPSNLTTL-----EEVETYCKAEEKNHRELYFAYGTTRDLYIDAVRLMIERILRIRDFGCYTDE-QGYVLQFPGRAFDNVDVDPVISYLHNVAFTYGFC 199
            +N + +CL+V +  +HV+       +   +   P     +  +FR +DDCYRPSA E+++++  +FV+ P   +     C  +Y +  R P  PP I +  +   P N   +      +++  C   ++N R   F   ++R  +I+AVR + + + RI++F C  D   G  L    R   N+ VD +++YLH +AF++GFC
Sbjct:    2 WNPNPICLIVAVVVLHVLHTPAVANNSTCSISVPFSPNLVDTSFRLVDDCYRPSAEESISIFSRMFVYWPRHGSPD--PCPVRYVVRIRTPPRPPLIVYLPS---PDNYEPIFNAPQSDMDAVCSRLQRNARRRLFVNDSSRPQFIEAVRAIAQGLKRIKNFQCDIDSGTGAFLPQDERKKSNLGVDGILTYLHTLAFSHGFC 199
The following BLAST results are available for this feature:
BLAST of Gvermi790.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IG86_9FLOR1.990e-2428.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:290858..291463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi790.t1Gvermi790.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 290858..291463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi790.t1 ID=Gvermi790.t1|Name=Gvermi790.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=202bp
MTKFNQHILCLLVLASIHVIKASGTPRSCNGTEPGPIPEQSIGKTFRYLD
DCYRPSATETVAVYRNLFVFTPIQPTLRVLGCFEKYAMHYRGPDTPPFIS
HFKAFAPPSNLTTLEEVETYCKAEEKNHRELYFAYGTTRDLYIDAVRLMI
ERILRIRDFGCYTDEQGYVLQFPGRAFDNVDVDPVISYLHNVAFTYGFCA
V*
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