Gvermi789.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi789.t1
Unique NameGvermi789.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length549
Homology
BLAST of Gvermi789.t1 vs. uniprot
Match: A0A2V3J4D7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4D7_9FLOR)

HSP 1 Score: 451 bits (1161), Expect = 4.600e-150
Identity = 243/542 (44.83%), Postives = 350/542 (64.58%), Query Frame = 0
Query:   25 LFLVQVCS-----ADKFSGCVTQRFPIYEDNQKNRRFIISEYGPSAQILRVRKDLQEKIAPMTSLLKNVVKIIDDRRRKHDVLQCNLDDK--GWLYTADLSSRYLQIGKLNDFCHSQLDGADAVSEGLLSRSDFHNSLDVIGDGVQALYETVSSIAESPQRQGLGNWTSSYPLRNWGVRGGMQQCRVETFSAYRQRNNFFLRASMTNHEVHRYVQDRHRQFVSEWIRDDGSQSLEMVHPSIKDMKLVKGSTLFEEWWGRAWISWHGQMQDFSSPAVQRAAEENEVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDVISAVPFLIKGIELVRSSQSNLVLAVYYAGDEDLADIQIWAANCRGTDRFKIVGWILIVVGILAVIGGIALEILCKKYMDRKRNEDGVNVVGPFGKAMLASPGMETSNSCFDLMSARYSDESSEVDMKEFDVEEA-KASDFHDSVSWDEKPGWIAAVLKRFLILSHDSPLQVW---ANSVDSQRMTSAEQ-------AGVGHDGNASVER 548
            LFL  +C+     A     C+ Q F I +DNQ NRRF+IS+  P+A++LR   + Q ++ PM  L+KN+V  ID + R+  +  CNL +K   W+YTA + +RYLQIG L+  CHSQL GADAV  GLLS+ +   S+ VIG GVQALYE +S+I+ES Q +   NW  S+PLR+W +    Q CR+E+FSAYR+ +++FLRA MTNH V++YV+DR RQFV+EWIRDD S+S++++HP+  D +L++G+TL  EW  RAWISWHG+MQD  +PA+++A E+N + ++LA DSI P+N+A++ LP+ MS IP +F+A+L     +LY+I TDV++ +PFLIKGIEL+ ++QS+  L  YYAGDE LAD+Q+W A CRGT +FK +G   +++ + A++ G+ LE+   KYM ++R    + V GPFG+AM  S       + F  +  RYS  S E +    D + A +  D  +S S     GWI + LK      H S    +   A++ +  R    E+       AGVG DG +S ER
Sbjct:   21 LFLAAICTLHCANAVDDEKCLRQPFIIDQDNQVNRRFLISKDAPTAKVLRNHTEWQHRVDPMIRLMKNIVNGID-QLRESGLSMCNLQEKDTAWVYTARIQARYLQIGDLSSSCHSQLSGADAVKGGLLSQHEVKTSMGVIGTGVQALYEAISNISESRQLKRWDNWAQSFPLRDWRIADQSQTCRMESFSAYRKNSSYFLRAVMTNHHVNKYVEDRKRQFVNEWIRDDYSESIKVIHPNHVDKQLMEGTTLLTEWGARAWISWHGEMQDDDNPAIRKATEQNTIEIDLAEDSIVPSNVALLALPMFMSLIPVAFVAELGALGTVLYVIFTDVVAVIPFLIKGIELLSTTQSHNSLVAYYAGDEKLADLQVWVAECRGTAKFKYIGLAFVIIALAAIVTGVLLEVQAMKYMQKRRGNSELPVAGPFGRAMFDSTAEGLLGTGFAEIWERYSIASFESERLGADKDTASEGEDTQESGS-----GWIRSTLKWISDHIHSSTNDGFHSEASTSERSRECDLEETDILNACAGVGKDGASSAER 556          
BLAST of Gvermi789.t1 vs. uniprot
Match: A0A2V3J352_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J352_9FLOR)

HSP 1 Score: 402 bits (1033), Expect = 8.180e-131
Identity = 223/520 (42.88%), Postives = 320/520 (61.54%), Query Frame = 0
Query:   35 KFSGCVTQRFPIYEDNQKNRRFIISEYGPSAQILRVRKDLQEKIAPMTSLLKNVVKIIDDRRRKHDVLQCNLD--DKGWLYTADLSSRYLQIGKLNDFCHSQLDGADAVSEGLLSRSDFHNSLDVIGDGVQALYETVSSIAESPQRQGLGNWTSSYPLRNWGVRGGMQQCRVETFSAYRQRNNFFLRASMTNHEVHRYVQDRHRQFVSEWIRDDGSQSLEMVHPSIKDMKLVKGSTLFEEWWGRAWISWHGQMQDFSSPAVQRAAEENEVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDVISAVPFLIKGIELVRSSQSNLVLAVYYAGDEDLADIQIWAANCRGTDRFKIVGWILIVVGILAVIGGIALEILCKKYMDRKRNEDGVNVVGPFGKAMLASPGMETSNSCFDLMSARYSDESSEVDMKEFDVEEAKASDFHDSVSWDEKPGWIAAVLKRFLILSHD--SPLQVWANSVDSQRMTSAEQ--AGVGHDGNASVER 548
            K + C+ Q FPI+++NQKN RF++SE   +A++L     LQ++I PM SLL+ VVK ID RR  +D+ +CNL+     W+YTA L++R+ QIG L+  C+SQL G +AV E LL+ +   +S+  IG GVQALYE   +  +         W  ++PLR+W  +   +QC++ETFSAYR RN+ ++RA++TNH+V  YVQD  RQFV EW++ D S SL MV P +++  LV GST+  +   RAW+SWHG+M++ S+PA+Q     N++ +ELA D++AP+NIA++ LPLVMSFIP +FLA+L+T   L YI+ TD+ISAVP LIKGIELV ++ S   L  YYAGD++LAD+Q+W A C GT+RF+ +G   IV+   ++I G+ LE+    YM R ++++G  V GPFGKAM          +       RYS+   + +     V +A  S       +      I  +L      S+   S       S  S+    AE   AGVG DG +S ER
Sbjct:   40 KDTHCLKQEFPIHQENQKNIRFVLSETALTAKVLERNLTLQKRIRPMVSLLRGVVKAIDSRRDHNDIRKCNLELIIPNWVYTARLNARFFQIGDLSRSCYSQLHGREAVKENLLTNAQVKDSMKDIGSGVQALYEASKNAVDGSTYMDSKQWRRTFPLRHWRNQDLPEQCQLETFSAYRIRNDVYIRAAVTNHDVDEYVQDGDRQFVMEWVKQDYSTSLRMVQPKLREKCLVNGSTILWKRGARAWLSWHGEMKEDSNPAIQEVLRSNQIEIELAEDAVAPSNIALLALPLVMSFIPVAFLAELNTCGVLWYIVFTDIISAVPLLIKGIELVGTTNSRQELVAYYAGDKNLADVQVWVAKCSGTNRFRNIGMSFIVIASASIIVGMVLEVCGMIYM-RSKSQEGKPVEGPFGKAMFEITARSVLGTGHGEDWERYSEVMEDAEDVRLSVGDADYSRDAPEAKYGPWKDVILRILSSVSFSSNHVISEKPAGKTSRKSEESDEAEDYTAGVGDDGMSSAER 558          
BLAST of Gvermi789.t1 vs. uniprot
Match: A0A2V3IKP5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKP5_9FLOR)

HSP 1 Score: 233 bits (595), Expect = 1.450e-65
Identity = 147/452 (32.52%), Postives = 239/452 (52.88%), Query Frame = 0
Query:   54 RRFIISEYGPSAQILRVRKDLQEKIAPMTSLLKNVVKIIDDRRRKHDVLQCNLD-DKGWLYTADLSSRYLQI-----GKLNDFCHSQLDGA-DAVSEGLLSRSDFHNSLDVIGDGVQALYETVSSIAESPQRQGLGNWTS-SYPLRNWGVRGGMQQCRVETFSAYRQRNNFFLRASMTNHEVHRYVQDRHRQFVSEWIRDDGSQSLEMVHPSIKDMKLV--------KGSTLFEEWWGRAWISWHGQMQDFSSPAVQRAAEENEVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDVISAVPFLIKGIELVRS-SQSNLVLAVYYAGDEDLADIQIWAANCRGTDRFKIVGWILIVVGILAVIGGIALEILCKKYMDRKRNEDGVNVVGPFGKAMLASPGMETSNSCFDL--MSARYSDESSEVDMKEFDVEEAKA 486
            R F +S+  P+A+  R  +D  +K+      ++ +V+I+D RR K+    CNL  D  W+     ++   ++     G L+D C S+LD   D  S+  L +    +S+ +I D V  +   +    +SP  +GL NWT  ++ L +W +R   Q C ++T SAYR      +   +TN  V ++V D  RQ   EW+RDD   S++M  P +              K +T+  +W G+  ++ HG+M    +PA++ A  +N V ++LA D+I P+NIAI+ LPL M+ IP +FLA+L T+  L YII TDV S +PFL+KG+EL+ S          +Y G ++  +I++WAA+C+G DRF  +G   +V+ + A+I G+  E      M R+R ++G    GPFG+ +     M    S  D      RYS ++++ D    D  +A +
Sbjct:   45 RYFSMSDDAPAARYYRQNEDDGDKMKRAFKFVQKLVEIMDKRRDKNHPDACNLHRDLQWVRDGPDAATKREVVAAGRGGLDDTCPSRLDFTRDQHSDPELKKLAA-DSMSIIKDVVHTMPSAMEG-PQSPSSRGLRNWTEETHQLADWDLRRLSQTCELQTISAYRIDGTLHMLVDVTNRPVDQFVFDYERQLYMEWVRDDFKGSMKMTQPRLIPKNATHDDRGDYEKSTTILTKWGGKLNLASHGEMTLDKNPAIKEALRQNTVAIDLAEDAITPSNIAILALPLTMNLIPVAFLAELSTFAMLAYIIFTDVFSTLPFLVKGVELINSVDHERRETVAFYLGTKEFGEIEVWAASCKGDDRFHAIGVAFVVIAVAAIIVGVLFEAFATMLMRRRRRKEGSEAEGPFGRVVFDITKMSLLGSGMDADDFERRYSIDAADFDRDTEDESQASS 494          
BLAST of Gvermi789.t1 vs. uniprot
Match: R7QLA2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLA2_CHOCR)

HSP 1 Score: 193 bits (490), Expect = 1.720e-51
Identity = 109/298 (36.58%), Postives = 173/298 (58.05%), Query Frame = 0
Query:  153 NSLDVIGDGVQALYETVSSIAESPQRQG-LGNWT-SSYPLRNWGVRGGMQQCRVETFSAYRQRNNFFLRASMTNHEVHRYVQDRHRQFVSEWIRDDGSQSLEMVHPSIKDMKLVKGSTLFEEWWGRAWISWHGQMQDFSSPAVQRAAEENEVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDVISAVPFLIKGIELVRSSQSNLVLAV-YYAGDEDLADIQIWAANCRGTDRFKIVGWILIVVGILAVIGGIALEILCKKYMDRKRNEDGVNVVGPFGKAM 447
            N  + I D   AL++   +I + P R     NWT  + PLR+W +R   Q C  +   AYR+   +FLRA +TN+ V  ++ D  RQFV E+I  D S +L + H       +   +T+   + G   ++    M    +PA+  A   N + V+ A D++  +NIAI+ LP+VM+  P +FLADL+T+  L YI+ TD+ SA+PF+IKG EL+ S+ +N   AV Y+AG+E L  +++WAA C G D F+++G + ++V  +A++GG+ LE++    M R+R  +     GPFG A+
Sbjct:   21 NLSETIVDAKDALFQAQRNIPQLPDRSDDAKNWTRGAVPLRDWDLRRSGQTCTSDNLFAYRKMGTWFLRAGVTNNPVDAFMPDYERQFVDEYIPRDWSDALRLPHVRYGGGPVENATTIIARFGGIPGLASVSVMVFDENPALTEALRLNAIAVDQAKDAVTLSNIAILALPIVMTLFPVAFLADLNTFAMLCYIVFTDIFSALPFMIKGFELLDSAATNRGEAVAYHAGNETLGQMEVWAAECHGEDSFRVMGIVFVIVAAVAMVGGVLLEVVAAGVMRRRRAVNKNEASGPFGMAL 318          
BLAST of Gvermi789.t1 vs. uniprot
Match: A0A2V3IMJ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMJ0_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 3.920e-18
Identity = 59/167 (35.33%), Postives = 97/167 (58.08%), Query Frame = 0
Query:  275 GRAWISWHGQMQDFSSPAVQRAAEENEVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDVISAVPFLIKGIELVRSSQSNLVLAVYYAGDEDLAD---------IQIWAANCRGTDRFKIVGWILIVVGILAVIGGIALEILCKKYMDRKR 432
            G A+ S  G++    + AV+ A +    NVELA D+  P+NIAI+ LPL M+ +P + +AD++T+  L+Y +LTDV++AVP  IKG+E++   +     AV      +L +          +IW A C     F   G IL+VV +L ++GG+  EI+ K+++ ++R
Sbjct:  285 GAAFGSEFGKVFPADNVAVELALDRGNHNVELAFDATTPSNIAILALPLAMNVVPVALIADVNTFGMLVYTLLTDVLTAVPLAIKGVEVLLIGKKVKYAAVTRISGGNLWENDQQQQGKAAEIWVAECVAEGNFITQGSILLVVALLFMVGGVVAEIVAKRWVQKRR 451          
BLAST of Gvermi789.t1 vs. uniprot
Match: A0A2V3ILT6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT6_9FLOR)

HSP 1 Score: 96.3 bits (238), Expect = 1.290e-17
Identity = 95/382 (24.87%), Postives = 183/382 (47.91%), Query Frame = 0
Query:   78 IAPMTSLLKNVVKIIDD----------RRRKHDVLQCNL-DDKGWLYTADLSSRYLQIGKLNDFCHSQLDGADAVSEGLLSRSDFHNSLDVIGDGVQALYETVSSIAE----SPQRQGLGNWTSSYPLRNWGVRGGMQQCRVETFSAYRQRN-NFFLRASMTNHEVHRYVQDRHRQFVSEW--IRDDGSQSLEM-VHPSIKDMK-LVKGSTLFEEWWGRAWISWHGQMQDFSSPAVQRAAEENEVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDVISAVPFLIKGIELVRSSQSNL---VLAVYYAGDEDLAD----IQIWAANCRGTDRFKIVGWILIVVGILAVIGGIALEILCKKYMDRKR 432
            +AP+   ++++++++ D          +++   +  CN  +   W Y+  LS+ +   G  +   ++ +   DA S   +S +       ++ D   AL     SIA     S +      WT++    N       QQC    FS +   N +++L   +TNH       D  R  + E+  IR+D    L M +H    D   L   +T  ++  G    S    +    + A++ A +  E  VE+A D+  P+N AI+ LPLV++ IP + +AD++T+  ++Y +LTDV++ VP ++KG+EL+  S+      ++ +  A  E + +     ++W A C  +  F+ +G  L+VV ++ ++GG+  E++  +++  KR
Sbjct:   47 LAPLKPRIRSLLQVVQDVDKRVVTALHQQQAAHIPTCNYRNHHQWKYS--LSNYFENRGWNHSISYACVSDVDAAS---ISPAQSRRVFQLVTDYSAALSHLAPSIATTIVASTKPTLPSEWTNATRPSNIQSIVRTQQC-THDFSFFVMLNGSWYLSNRLTNHNPLITYPDGERFHLVEYDTIRNDVLHPLPMKLHRKPLDSAPLQSANTYIQQVKGSDTASEILPIIPQQNLAIKLALQRGEHAVEIANDAATPSNTAILLLPLVLNLIPVALIADVNTFGMIVYTLLTDVLTVVPLMVKGVELIIVSKQKTYASIMRITGANFEPMTNQSKVAELWVARCVPSRSFRGIGEALLVVALICMVGGVLAELVAMRWVAGKR 422          
BLAST of Gvermi789.t1 vs. uniprot
Match: A0A2V3IM17_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM17_9FLOR)

HSP 1 Score: 94.7 bits (234), Expect = 4.020e-17
Identity = 94/385 (24.42%), Postives = 162/385 (42.08%), Query Frame = 0
Query:   52 KNRRFIISEYGPSAQILRVRKDLQEKIAPMTSLLKNVVKIIDDRRRKHD------VLQCNLDDKGWLYTADLSSRYLQIGKLNDFCHSQLDGADAVSEGLLSRSDFHNSLDVIGDGVQALYETVSSIAESPQRQGLGNWTSSYPLRNWGVRGGMQQCRVETFSAYRQRNNFFLRASMTNHEVHRYVQDRHRQFVSEWIRDDGSQSLEMVHPSIKDMKLVKGSTLFEEWWGRAW--ISWHGQMQDFSSPAVQRAAEEN----------EVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDVISAVPFLIKGIELVRSSQSNLVLAVYYAGDE-DLADI--QIWAANCRGTDRFKIVGWILIVVGILAVI 415
            + R F IS+  P A  ++     +  +  +T     V + + D RR+           CN D + W    + +SR+ +   +N    S++   D     L       +   ++  G +AL      I        +GNWT +   R        Q C +  + A R    ++    +TN   ++++ D  R  ++E  R + +     V P++  + +  G+        RA   I+  G   D SS  +   AE N          E   +   D + P+NIAI+  PL ++ +P + + D D W  +LYI+ +DV++A+P LIKGIELV   ++  V  V   GD  D A I  ++  A CR       +G + I +   A++
Sbjct:   43 QGRLFAISDKAPFATHMQHEPHYRTALNLLTDFFTRVERDVTDSRRQSKSSNSVRTRPCNTDPQRWRRATEFASRH-RGWPVNSPHSSEVCVTDYYGPPLGYTLSLPHMRHLLSQGFEALERNAYRI----MLDAVGNWTHATSGRLTTFEWTSQACELTNYGAVRLHGKWWPSVGITNKPPYQHLPDGQRIVIAEAHRLENAT----VVPALMTLPINPGTGTVHNVTDRATTIITIWGGASDPSSAYLPGTAERNVALLAARQKGEHFAQQMEDVLLPSNIAILAFPLALNLVPVALITDCDQWSAVLYILFSDVLTALPMLIKGIELVTIGKARFVQVVTRMGDTLDQATISAEMTVAVCRMRQDAGTIGVVFICIACAAMV 418          
BLAST of Gvermi789.t1 vs. uniprot
Match: A0A7S1XE90_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XE90_9RHOD)

HSP 1 Score: 90.1 bits (222), Expect = 1.590e-15
Identity = 85/374 (22.73%), Postives = 174/374 (46.52%), Query Frame = 0
Query:   72 KDLQEKIAPMTSLLKNVVKIIDDRRRKHDVLQCNLDDKGWLYTADLSSRYLQIGKLNDFCHSQLDGADAVSEGLLSRSDFHNSLDVIGDGVQALYETVSSIAESPQRQGLGNWTSS--YPLRNW--GVRGGMQQCRVETFSAYRQRNNFFLRASMTNHEVHRYVQDRHRQFVSEWIRDDGS---------QSLEMVHPSIKDMKLV---KGSTLFEEWWGRAWISWHGQMQDFSSPAVQRAAEENEVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGL-LYIILTDVISAVPFLIKGIELVRSSQS-NLVLAVYYAGD-EDLADIQIWAANCRGTDRFKIVGWILIVVGILAVIGGIALEILCKK 426
            +D+ +    +  ++ ++++++++ R       C + D  W           + G +N F    L+ A   S   +SR    +    IG   +AL +  S+      +   G + S   +PL  W    +   Q C + T +       + + +S+TN E +  ++D  R ++   +R D S         +++++  P            G+   + W G+A ++         +P V    +++  N EL  +++ P+NIAI+ +P+V++ +P S    L TW  + L+I+ TD+++ +PFLIKG+EL+  ++S +  L  Y+ G+  +   +Q+W  +C G  +  + G + +VVG   +  G+ LE++  K
Sbjct:   78 EDIDQVNQDLALVVGDLLQVVEEERN------CAVLDTEW-----------RAGVMNFFAQRGLNPA---SPNCISRYSLTHK---IGQRYEALQDLSSNYFAKWGQPWAGFFDSRTIWPLGPWRFDFQAETQVCNIHTLTLASVDGEWSVVSSLTNMEPNLALEDTKRMYLMSLLRIDISDISNPRFLNETVQIRTPQADPNNRSGPGAGTLRLDIWGGKAGLATVTDQAPLQNPLVDMLLKQDNQNAELFQETLLPSNIAILAMPMVINLVP-SHTVKLKTWSAIFLFILATDIVTTLPFLIKGVELITQARSASAGLVAYHVGNWGESQHLQLWLGSC-GIAKSPVPGIVFLVVGFFMLALGMFLEVVTHK 426          
The following BLAST results are available for this feature:
BLAST of Gvermi789.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J4D7_9FLOR4.600e-15044.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J352_9FLOR8.180e-13142.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKP5_9FLOR1.450e-6532.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLA2_CHOCR1.720e-5136.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IMJ0_9FLOR3.920e-1835.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT6_9FLOR1.290e-1724.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IM17_9FLOR4.020e-1724.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XE90_9RHOD1.590e-1522.73Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 359..400
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 316..334
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 335..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 424..548
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 401..423
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 341..358
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..315
NoneNo IPR availableTMHMMTMhelixcoord: 401..423
NoneNo IPR availableTMHMMTMhelixcoord: 341..358
NoneNo IPR availableTMHMMTMhelixcoord: 312..334
NoneNo IPR availableTMHMMTMhelixcoord: 13..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:288153..289799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi789.t1Gvermi789.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 288153..289799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi789.t1 ID=Gvermi789.t1|Name=Gvermi789.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=549bp
MTFSRSCVRTKAQLIFSFVWAIIALFLVQVCSADKFSGCVTQRFPIYEDN
QKNRRFIISEYGPSAQILRVRKDLQEKIAPMTSLLKNVVKIIDDRRRKHD
VLQCNLDDKGWLYTADLSSRYLQIGKLNDFCHSQLDGADAVSEGLLSRSD
FHNSLDVIGDGVQALYETVSSIAESPQRQGLGNWTSSYPLRNWGVRGGMQ
QCRVETFSAYRQRNNFFLRASMTNHEVHRYVQDRHRQFVSEWIRDDGSQS
LEMVHPSIKDMKLVKGSTLFEEWWGRAWISWHGQMQDFSSPAVQRAAEEN
EVNVELATDSIAPANIAIITLPLVMSFIPFSFLADLDTWRGLLYIILTDV
ISAVPFLIKGIELVRSSQSNLVLAVYYAGDEDLADIQIWAANCRGTDRFK
IVGWILIVVGILAVIGGIALEILCKKYMDRKRNEDGVNVVGPFGKAMLAS
PGMETSNSCFDLMSARYSDESSEVDMKEFDVEEAKASDFHDSVSWDEKPG
WIAAVLKRFLILSHDSPLQVWANSVDSQRMTSAEQAGVGHDGNASVER*
back to top