Gvermi786.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A2V3J3F1_9FLOR (Putative RNA-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F1_9FLOR) HSP 1 Score: 631 bits (1627), Expect = 6.730e-223 Identity = 371/505 (73.47%), Postives = 388/505 (76.83%), Query Frame = 0
Query: 1 MATLHPPQVDGTPSRDQEPSEKWSAHDAPTNPPXXXXXXXXXXXXXXXXXXXXXXXKSSNPQTPDPPNVPSALYEQQQRAFXXXXXXXXXXXXXXXQPSPPST-----------SAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTS-APGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDSYNQGGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYYSNYPASLAEQYGAYYNNPQWQQYYAAMGYNFNFPQSYNPYQQYLQAYMSTQASANGVGGSAGMPANAASPNAPGAGGYDNAHGSGRY--GGXXXXXXXXXXGPS---------------LRRSSRRDDRYHPYR 476
MATLHPPQVDGTP+ DQ+P EKW+ DAP + P XXXXXXXXXXXXXX NVPSALYEQQQRAF +P PPS SAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADE+AATAAASRRHDLDGRQVEAKRAVPRSEGSS S APGH+ SF AAPRGQR+++ A PHRAHHTTKCKVFVGGLPSGCGG+EFR YFS+FGEV+DAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKG SQDRRHNRDSYNQG GRA XXXXXXXXXXXAYYSNYPASLAEQYGAYYN+PQWQQYYAAMGYNFNFPQSYNPYQQYLQAYM+TQASANG GGSA MPANAASPNAPGAGG+DN+H RY GG GP RRSSRRDDRYHPYR
Sbjct: 1 MATLHPPQVDGTPTPDQDPPEKWTPRDAPPDAPVNPDDYPNIXXXXXXXXXXXXXXXXXXXXXXXXXNVPSALYEQQQRAFHDQQHQYSQ------RPVPPSXXXXXXXXXXXXSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEDAATAAASRRHDLDGRQVEAKRAVPRSEGSSASTAPGHNPSFPAAPRGQRYND-APGAPPHRAHHTTKCKVFVGGLPSGCGGEEFRAYFSQFGEVIDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGVSQDRRHNRDSYNQGAGRAGASASQNDGLPHSGANGXXXXXXXXXXXAYYSNYPASLAEQYGAYYNSPQWQQYYAAMGYNFNFPQSYNPYQQYLQAYMNTQASANGTGGSAAMPANAASPNAPGAGGFDNSHVPARYRGGGGGHGGDMGHGGPQNGHXXXXXXXXXXXXSRRSSRRDDRYHPYR 498
BLAST of Gvermi786.t1 vs. uniprot
Match: R7QHG3_CHOCR (Putative Heterogeneous nuclear ribonucleoprotein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHG3_CHOCR) HSP 1 Score: 417 bits (1072), Expect = 1.830e-138 Identity = 312/553 (56.42%), Postives = 334/553 (60.40%), Query Frame = 0
Query: 1 MATLHPPQVDGTP---------SRDQE-PSEKWSAHDAPTNPPXXXXXXXXXXXXXXXXXXXXXXXKSSN---------------PQTPDPPNV--PSALYEQQQRAFXXXXXXXXXXXXXXXQ---------PSPPS-----------TSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDSYNQGGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAY--YSNYPASLAEQYGAYYNNPQWQQYYAAMGYNFN-FPQSYNPYQQYLQAYMSTQASANGVGGSAGMPANAASPNAP------------GAGGYDNAHG-SGRYGGXXXXXXXXXX--------------GPSLRRSSRRDDRYHPYR 476
MATLHPP VDG S D P + W + A + P SN PQ P P +ALY+QQQ+ XXXXXXXXX P+PP+ + AG KIFVGGLSWET E+SLR YFEQIGTV DCVIMRDRHTGHPRGFGFVTFAD++AA AAASRRHDLDGRQVEAKRAVPR+EG AHHTTKCKVFVGGLPS CG DEFR YFS+FGEVVDAQVMIDHNTGNSRGFGFVTF +EATVN+VVGPGKSNTDHEIMGKCVEVKRAEPKGA DRR+NRD+Y XXXXXXXXXXXXXXXXXXXXXXXXXXXX YSNYPASLAEQYGAYYN+PQWQQYYAAMGYNFN +PQ YNPYQQYLQAYM+ A G GYDN G +GRYGG XX XXX GP RRSSRRDDRYHPYR
Sbjct: 1 MATLHPPTVDGPSPTAAAPEPRSADPPAPDQNWPSDSADPSAPAPTDNSEQVKGEDEILYGQSAQASQSNHIPQSQHSGDPSQPNPQQPSDPTALAAAALYQQQQQLHSQQSQPXXXXXXXXXMQHQDPSGQAPAPPNPNQGPAGPSSNSGAGSKIFVGGLSWETGEESLRRYFEQIGTVTDCVIMRDRHTGHPRGFGFVTFADDDAAGAAASRRHDLDGRQVEAKRAVPRNEG--------------------------------AHHTTKCKVFVGGLPSSCGPDEFRAYFSQFGEVVDAQVMIDHNTGNSRGFGFVTFGSEATVNSVVGPGKSNTDHEIMGKCVEVKRAEPKGAPNDRRNNRDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSNYPASLAEQYGAYYNSPQWQQYYAAMGYNFNAYPQGYNPYQQYLQAYMNNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSGYDNNQGGAGRYGGGAXXDIAXXXXXXXXXXXXXXXXPGPGSRRSSRRDDRYHPYR 521
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S2ZPG2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZPG2_9RHOD) HSP 1 Score: 207 bits (528), Expect = 1.660e-58 Identity = 113/229 (49.34%), Postives = 144/229 (62.88%), Query Frame = 0
Query: 108 KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSE-------GSSTSAPGHSASFTAAPRGQRFSEGASQGAPHR-----AHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDSYNQG 324
K+FVGGLSWETDE S+R YFEQ G V DC+IMRDRHT HPRGFGFV++ + A + +H LDGRQV+AK AVPRS+ S+T++ + SFT ++ SE P + + K+FVGGLPS C + YFS FGEV DAQV+IDH TGNSRGFGFVTF +EA + + G + H+I+GK VEVK+AEPK + + RR + G
Sbjct: 103 KVFVGGLSWETDEDSMRKYFEQFGKVRDCLIMRDRHTKHPRGFGFVSYENAGDANKVTTMKHVLDGRQVDAKHAVPRSDLSTVSSIPSATNSKKSNMSFTE----KQASEAEEALGPPKDPTPASDPALSKKIFVGGLPSQCRNAQLEEYFSAFGEVADAQVLIDHKTGNSRGFGFVTFEDEAAIADLFGSSDGSAHHDILGKVVEVKKAEPKQSLESRRSRENKQTSG 327
BLAST of Gvermi786.t1 vs. uniprot
Match: M2XIP2_GALSU (Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIP2_GALSU) HSP 1 Score: 204 bits (518), Expect = 1.300e-57 Identity = 111/216 (51.39%), Postives = 136/216 (62.96%), Query Frame = 0
Query: 100 PPSTSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 315
P + + KIFVGGLSWET E++L+ YFE G VLDCVIMRD+HTGHPRGFGFVTF EE+A AA++RH+LDGRQVEAK+AVP++E + + P R K+FVGGLP C ++F YF R G VV+A +M DH TG SRGFGFVTF++E V V + HEI GK VEVK+AEPK S+ RR
Sbjct: 43 PGNQNNNSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATKRHELDGRQVEAKKAVPKAE---------------------YITRSQVTKPTR-------KIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVF----EQSQHEIKGKIVEVKKAEPKHFSEGRR 226
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A2V3IP63_9FLOR (RNA-binding protein Musashi-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP63_9FLOR) HSP 1 Score: 201 bits (510), Expect = 5.050e-56 Identity = 119/222 (53.60%), Postives = 138/222 (62.16%), Query Frame = 0
Query: 99 SPPSTSAGC-----KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 315
+PPS S+ K+FVGGLSWETDEQSLR YF + G+V DCVIMRDR TGHPRGFGFVT+ D+ A A+ H+LDGRQVEAK AVPRSE P S A TK KVF+GGLP+ C + +F RFG++ + QVM DH TGNSRGFGFVTF +E TV+ VV + DHEIM K VEVKRAEPK A RR
Sbjct: 6 NPPSNSSAQSTTHKKVFVGGLSWETDEQSLRDYFGRYGSVSDCVIMRDRLTGHPRGFGFVTYEDQLVAERVAAEFHELDGRQVEAKIAVPRSE---CVPPSRS----------------------NAWRATK-KVFIGGLPATCREADLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVV-----DIDHEIMQKHVEVKRAEPKQALDARR 196
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A5J4Z311_PORPP (Putative RNA-binding protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z311_PORPP) HSP 1 Score: 203 bits (517), Expect = 1.510e-54 Identity = 109/203 (53.69%), Postives = 133/203 (65.52%), Query Frame = 0
Query: 106 GCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPK 308
G K+FVGGLSW+T E SLR+YF + G VLDCVIMRDR +GHPRGFGFVTF DE + A+ +H+LDGR VEAKRAVPRS+ S A + +G R K+FVGGLPS CG EFR YFSRFGE+++ VM DH TGNSRGFGFVT+ ++ V+ V+ +HEI+GK VE+K AEPK
Sbjct: 225 GGKLFVGGLSWDTTEASLRSYFSRFGRVLDCVIMRDRVSGHPRGFGFVTFEDEAVSDHVAAEQHELDGRAVEAKRAVPRSDCSG-------AVKVPSSKGSR-------------------KLFVGGLPSACGDHEFRTYFSRFGEILELSVMFDHTTGNSRGFGFVTYYDDRAVDLVM-----QMEHEILGKRVEIKHAEPK 396
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S0ZCZ9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCZ9_9RHOD) HSP 1 Score: 195 bits (496), Expect = 3.600e-53 Identity = 104/212 (49.06%), Postives = 138/212 (65.09%), Query Frame = 0
Query: 97 QPSPPSTSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPK 308
+PS + KIFVGGLSWETDE SL++YF + GTV+D VIMRDR++GHPRGFGFVTF D+ AA A +H+LDGR VEAK+AVPR+E T + R S G+ K+FVGGLP+ C + + +F +GEV++AQVM DHNTGNSRGF FVT++++++++ V+ +H +MGK VEVK AEPK
Sbjct: 6 EPSIENMMQPSKIFVGGLSWETDEISLKSYFGKYGTVIDSVIMRDRNSGHPRGFGFVTFEDDFAADRVAREKHELDGRLVEAKKAVPRAE------------CTPSTRAVTSSRGSR-------------KIFVGGLPASCDDESLKTHFMSYGEVLEAQVMYDHNTGNSRGFAFVTYSDDSSIDRVM-----EVEHFVMGKLVEVKHAEPK 187
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S1EPW2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPW2_9RHOD) HSP 1 Score: 194 bits (494), Expect = 8.820e-53 Identity = 110/216 (50.93%), Postives = 135/216 (62.50%), Query Frame = 0
Query: 106 GCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAP---------RGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGK-SNTDHEIMGKCVEVKRAEPKGAS 311
G K+FVGGLSWET E LR YFE+ G VLD ++MRDR TG PRGFGFVTFA E+ A ++ H +DGRQV+A+ AVPR + + +A+ AA RG S A G P K+FVGG+P R YF RFGEVV AQ+M+DH T SRGFGFVTFA+ +V AVVG G+ SN +HEI+G+ VEVK AEP+ S
Sbjct: 35 GVKVFVGGLSWETSEDVLRDYFERFGKVLDALVMRDRTTGKPRGFGFVTFASEDTARIVSAEPHQIDGRQVDARFAVPRGNAAQSGQHFETANPLAASGGLDGASTVRGPVPSTAAGGGGPR--------KIFVGGIPISVEDAGLREYFERFGEVVQAQIMLDHRTNKSRGFGFVTFADAQSVVAVVGAGRQSNMEHEILGRVVEVKIAEPRNRS 242
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S1TL02_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TL02_9RHOD) HSP 1 Score: 190 bits (482), Expect = 4.150e-52 Identity = 107/208 (51.44%), Postives = 129/208 (62.02%), Query Frame = 0
Query: 108 KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 315
KIFVGGLSWET+E SLR YFE+ G VL+C+IMRDR TGHPRGFGFVTF D A A +H+LDGR VEAK A+PR+E P QR + +K KVFVGGLPS CG E YF FG V++ VM DH TGNSRGFGFVTF++ +++ V+ H+I+GK VEVKRAEPK + R+
Sbjct: 83 KIFVGGLSWETNEWSLRNYFEKFGRVLECLIMRDRSTGHPRGFGFVTFMDGTVAYRVAHEKHELDGRPVEAKLALPRNE---------------CPTPQRTN----------GSKASK-KVFVGGLPSNCGDTELHRYFQHFGTVMECLVMYDHQTGNSRGFGFVTFSDLVSIDRVM----EIEHHKILGKYVEVKRAEPKQVLESRK 260
BLAST of Gvermi786.t1 vs. uniprot
Match: M2XNR8_GALSU (Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XNR8_GALSU) HSP 1 Score: 188 bits (478), Expect = 5.170e-52 Identity = 106/213 (49.77%), Postives = 129/213 (60.56%), Query Frame = 0
Query: 108 KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDS 320
K+FVGGLSWET E SLRAYFE G V DCVIMRD++TGHPRGFGFVTF D+ A AS H LDGRQVEAK+AVP++E S+ + TTK K+FVGG+ S C ++F YF +FG V+DA +M DH TG SRGFGF+TF + V+ V + H I GK VEVK AEPK S + R ++S
Sbjct: 32 KVFVGGLSWETGEDSLRAYFEGYGEVADCVIMRDKYTGHPRGFGFVTFQDDSVADLVASLSHILDGRQVEAKKAVPKAEVSTK---------------------------NETTKTTK-KLFVGGISSSCSDEDFLVYFQKFGAVLDAHIMYDHQTGKSRGFGFITFCSVEAVDKVFQTPR----HVIKGKVVEVKVAEPKHQSVESRKVKES 212 The following BLAST results are available for this feature:
BLAST of Gvermi786.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi786.t1 ID=Gvermi786.t1|Name=Gvermi786.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=477bpback to top |