Gvermi4390.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4390.t1
Unique NameGvermi4390.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length326
Homology
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BLAST of Gvermi4390.t1 vs. uniprot
Match: A0A2V3J1P2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1P2_9FLOR)

HSP 1 Score: 282 bits (721), Expect = 2.030e-90
Identity = 155/333 (46.55%), Postives = 199/333 (59.76%), Query Frame = 0 
Query:    1 MKVVIGYVLLFITAILTVVRGRAFRNGSDDSIGLPIGLNSLFSLNPAAKVLDST--TSTIKFAAFGKAILYVNGKEYREVSSTAPQTVTVQLKKNDVVAFKAIKTGQKAGLMAAVEWGSTKYVTGEDRFTARADYSRWEAGEQHHWSSAVSYTQQDTGAIRTFCHWERADIMDIKSGIFDDKASYIWRLKSTPGEAST-PADTIYVRLVVGGEKC-TAPVKVDDEITLHRVPDRTENDVQGLNDNDSSE----GFCACKLTDERGGQCYDMDDSSAESGRCRARPCDPKFECVVSGTKICIRRRVGTKLVMDAPNHCITVPAGDAETLIPYEG 325
            MKV I  VLL I A+L+V   RAF N S           S  SL    + +D     +TIKF+A+    L+VNGK       ++P TV V LKK DVVAF A K G+  G+M  V+W    Y +G  RFTA  DY +W   +Q +W+ A SY  +++G +RTFCHW+RAD MDIK+  FD KASY+WRL     +    P DT+++RLV+GGE C  +P K +      R  D +E D +   D  SS+    GFC CKLT+  GG+CYDMDD SA+ G C+ RPC+ KFEC  SG KIC+RR   +K+VM APNHC+ VP    E LIPYEG
Sbjct:    1 MKVSIIKVLLVIAAVLSVGSARAFWNTSQGDRNNNWFWPSWVSLTHILRAIDKDHKPATIKFSAYADTTLFVNGKSLGRTIISSPTTVNVDLKKGDVVAFMARKIGENPGVMVTVDWDGKMYRSGHSRFTANGDYEQWTEEDQENWNLASSYRHKESGTLRTFCHWDRADDMDIKTDKFDLKASYVWRLAPKDNKKEEKPTDTVFLRLVIGGENCGVSPGKDESNKPSQRAED-SEKDKKITFDGQSSDSDFQGFCVCKLTNRSGGECYDMDDDSAKEGGCKPRPCEAKFECTESGNKICMRRHADSKVVMTAPNHCMKVPTV-GENLIPYEG 331
The following BLAST results are available for this feature:
BLAST of Gvermi4390.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1P2_9FLOR2.030e-9046.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..325
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1514016..1514993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4390.t1Gvermi4390.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1514016..1514993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4390.t1 ID=Gvermi4390.t1|Name=Gvermi4390.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=326bp
MKVVIGYVLLFITAILTVVRGRAFRNGSDDSIGLPIGLNSLFSLNPAAKV
LDSTTSTIKFAAFGKAILYVNGKEYREVSSTAPQTVTVQLKKNDVVAFKA
IKTGQKAGLMAAVEWGSTKYVTGEDRFTARADYSRWEAGEQHHWSSAVSY
TQQDTGAIRTFCHWERADIMDIKSGIFDDKASYIWRLKSTPGEASTPADT
IYVRLVVGGEKCTAPVKVDDEITLHRVPDRTENDVQGLNDNDSSEGFCAC
KLTDERGGQCYDMDDSSAESGRCRARPCDPKFECVVSGTKICIRRRVGTK
LVMDAPNHCITVPAGDAETLIPYEG*
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