Gvermi792.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi792.t1
Unique NameGvermi792.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length161
Homology
BLAST of Gvermi792.t1 vs. uniprot
Match: A0A2V3IUF0_9FLOR (SHSP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF0_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 8.040e-20
Identity = 56/145 (38.62%), Postives = 75/145 (51.72%), Query Frame = 0
Query:   41 HPLENTQSRDPQVVEPTYYVESDDVQGFLYVELPGVRKRDIHIELHGHHLSISAKRFARA----IGSVTE----------------------EKEPKLLVQYALQLGLSHDTDISKVAVDEYSNGVLAINIPVVHKKTGRKINID 159
            HP   + S   Q VEP+Y+ ES+    FL VELPGV K  I IE+ GHHL++SA+RF  +    + S TE                        +P     Y L+L L++DTD+  V V+ Y NG+L I IPVV   + RKI I+
Sbjct:   25 HPRTPSSS---QTVEPSYFYESNQDSAFLQVELPGVAKEHISIEIQGHHLTLSARRFRTSKLAPLSSSTEGGDAAEAQDADHTATPAASEPGPADPTPAFTYVLELRLANDTDLEAVKVESYVNGILTIRIPVVSSTSSRKITIE 166          
BLAST of Gvermi792.t1 vs. uniprot
Match: Q7XZ71_GRIJA (Heat shock protein 16 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ71_GRIJA)

HSP 1 Score: 69.7 bits (169), Expect = 3.590e-12
Identity = 35/120 (29.17%), Postives = 68/120 (56.67%), Query Frame = 0
Query:   51 PQVVEPTYYVESDDVQGFLYVELPGVRKRDIHIELHGHHLSISAKRFARAIGSVT------------EEKEPKLLVQYALQLGLSHDTDISKVAVDEYSNGVLAINIPVVHKKTGRKINI 158
            P  + P++++ S D +  L VELPGV K DI +E++   L ++  R+ +   +              E  E ++  +Y+L++ L  D D+  ++ + Y+NG+L + IP+VH+++ RKI++
Sbjct:   27 PDRIIPSHFIHSGDKEAMLQVELPGVGKEDIEVEVNRRTLYVNGTRYDQVTSTAAVNNDANEEDSGKEPSEKRVERKYSLEIQLGSDADMDGISFESYNNGILTLKIPIVHQES-RKIDL 145          
BLAST of Gvermi792.t1 vs. uniprot
Match: R7Q6X4_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6X4_CHOCR)

HSP 1 Score: 64.7 bits (156), Expect = 4.480e-10
Identity = 46/161 (28.57%), Postives = 79/161 (49.07%), Query Frame = 0
Query:   23 PHQAHSHFHPF--RFGH---SRRHPLENTQS--RDPQVVEPTYYVESDDVQGFLYVELPGVRKRDIHIELHGHHLSISAKRFARAI------GSVTEE-----------KEPKLLVQYALQLGLSHDTDISKVAVDEYSNGVLAINIPVVHKKTGRKINID 159
            P+  HS F P+   FG+   + R  L+ T+S  R    VEP+Y  E+D       +E+PGV K ++ +E+H + L++  KRF R +       +V ++           K+P   + Y L+  L    ++  +  D   +G+L + IP+V  K  RK+ I+
Sbjct:    6 PYNRHSFF-PWGNSFGNDLRTMRRMLDMTESGPRSTHTVEPSYRYEADSAAAHFEIEIPGVSKDNLSVEVHENKLTVRGKRFCRPLIEKKDNSAVAKDPAQNGDPDQADKDPAPSIVYHLEARLPQRANVDAIKADHIGDGILNMTIPMVDDKGPRKVQIE 165          
BLAST of Gvermi792.t1 vs. uniprot
Match: R7QS04_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS04_CHOCR)

HSP 1 Score: 61.2 bits (147), Expect = 9.450e-9
Identity = 38/141 (26.95%), Postives = 66/141 (46.81%), Query Frame = 0
Query:   40 RHPLENTQS--RDPQVVEPTYYVESDDVQGFLYVELPGVRKRDIHIELHGHHLSISAKRFARAIGSVTEE-------------------KEPKLLVQYALQLGLSHDTDISKVAVDEYSNGVLAINIPVVHKKTGRKINID 159
            R  L+ T+S  R    VEP+Y  E+D       +E+PGV K ++ +E+H + L++  KRF R +    ++                   ++P   + Y L+  L    ++  +  D   +G+L + IP+V  K  RKI I+
Sbjct:   27 RRMLDMTESGARSTHTVEPSYRYEADGEAAHFEIEIPGVSKDNLSVEVHDNKLTVRGKRFRRPLIEKKDDDPAAAKDPAAQNGDPAHPGEDPVPSIVYLLEARLPQGANVDAIKADHVGDGILNMTIPMVADKGTRKIQIE 167          
BLAST of Gvermi792.t1 vs. uniprot
Match: A0A5E4LVR9_9ARCH (Small heat shock protein HSP16.5 n=1 Tax=uncultured archaeon TaxID=115547 RepID=A0A5E4LVR9_9ARCH)

HSP 1 Score: 55.8 bits (133), Expect = 4.700e-7
Identity = 32/90 (35.56%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   71 VELPGVRKRDIHIELHGHHLSISAKRFARAIGSVTEEKEPKLL-VQYALQLGLSHDTDISKVAVDEYSNGVLAINIPVVHKKTGRKINID 159
            +++PG  K+DI + +HGH LSISAKR     G++   + P ++  +  L +G+  D D+   A  +Y +GVL++ IP+   K G+ I+I+
Sbjct:   43 IDMPGFDKKDIKLRIHGHILSISAKRETVDEGTIIWRQRPNVIDKKVRLPIGVKEDEDLGASA--KYRDGVLSLIIPM---KNGKNISIE 127          
The following BLAST results are available for this feature:
BLAST of Gvermi792.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IUF0_9FLOR8.040e-2038.62SHSP domain-containing protein n=1 Tax=Gracilariop... [more]
Q7XZ71_GRIJA3.590e-1229.17Heat shock protein 16 n=1 Tax=Griffithsia japonica... [more]
R7Q6X4_CHOCR4.480e-1028.57Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
R7QS04_CHOCR9.450e-926.95Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
A0A5E4LVR9_9ARCH4.700e-735.56Small heat shock protein HSP16.5 n=1 Tax=unculture... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 70..158
e-value: 3.8E-8
score: 33.4
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 48..160
score: 11.00632
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 20..160
e-value: 2.8E-13
score: 51.8
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 52..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..160
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 69..146
e-value: 2.57963E-10
score: 52.1713

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:294286..294768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi792.t1Gvermi792.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 294286..294768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi792.t1 ID=Gvermi792.t1|Name=Gvermi792.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=161bp
MFPNIIQSIAAPLPFLLGQSNAPHQAHSHFHPFRFGHSRRHPLENTQSRD
PQVVEPTYYVESDDVQGFLYVELPGVRKRDIHIELHGHHLSISAKRFARA
IGSVTEEKEPKLLVQYALQLGLSHDTDISKVAVDEYSNGVLAINIPVVHK
KTGRKINIDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone