Gvermi796.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi796.t1
Unique Name	Gvermi796.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	301

Homology

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BLAST of Gvermi796.t1 vs. uniprot
Match: A0A2V3IIJ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIJ0_9FLOR)

HSP 1 Score: 419 bits (1077), Expect = 3.220e-142
Identity = 210/254 (82.68%), Postives = 232/254 (91.34%), Query Frame = 0

Query:    1 MGNQLFLNVSPSVWNVLKWALFTFMIMPAFEILTASLMASSATVRVQAGAQLELFDSRLGIFALHSRYAGKRRTRLWLVLGSAVLVAMELWLEMSFSAAEVAATVSEEVWVGPNYDERYMRQQNFSINDEPTRILETMSRRCIEGPRAMKRDSVQQATVTVSDEAEVVAQYSLTADWTVRAAYMREVDSMVACDGVAETTWASMEAPNIVSISGVEGFTPECGPARGVDSEWRQILFNESFTQRGTFVFDGERA 254
            MG QL LN+SPSVWNVLKWALFT +I PAFEI+TASLMASSAT RVQAGAQLELFDS+LGIFALHSRYAGKRRTRLWLVLG+AVL+A+ELWLEMSFSAAEV  TVSEEVWVGPN+DERYMR++NFSINDEPTR+LETMSR+CI GPRAMKRDSVQ+ATVTV +EAEV+AQYSLTA+WTVRAAY+RE DS+VACD VAET WAS+EAPNIVS  GVEGF  +C PA G+DSEW Q L NESFTQRG FVF+GERA
Sbjct:    1 MGKQLLLNLSPSVWNVLKWALFTLVITPAFEIMTASLMASSATARVQAGAQLELFDSQLGIFALHSRYAGKRRTRLWLVLGTAVLMALELWLEMSFSAAEVVVTVSEEVWVGPNHDERYMRRENFSINDEPTRLLETMSRQCIAGPRAMKRDSVQRATVTVLEEAEVIAQYSLTANWTVRAAYVREEDSLVACDAVAETKWASVEAPNIVSQYGVEGFHSDCDPALGLDSEWFQTLHNESFTQRGAFVFEGERA 254

[Close]

BLAST of Gvermi796.t1 vs. uniprot
Match: A0A2V3ITH0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITH0_9FLOR)

HSP 1 Score: 101 bits (251), Expect = 1.960e-20
Identity = 64/189 (33.86%), Postives = 103/189 (54.50%), Query Frame = 0

Query:    4 QLFLNVSPSVWNVLKWALFTFMIMPAFEILTASLMASSATVRVQAGAQLELFDSRLGIFALHSRYAGKRRTRLWLVLGSAVLVAMELWLEMSFSAAEVAATVSEEVWVGPNYDERYM-RQQNFSINDEPTRI-LETMS-RRCIEGPRAMKRDSVQQATVTVSDEAEVVAQYSLTADWTVRAAYMREVDS 189
            +L LNVSPSVWN++K+   + +I P FE L   L    A   +  G  + L D+RLGIF+LHS + G+ R R  L++    ++A+EL  E SFS+  VA + +E+VW  P++ +RY+   +      EP  + +E  +   C+EG   M+R        T  +  + + +YS+   +TVR  Y+   D+
Sbjct:    3 ELSLNVSPSVWNIIKYVTLSLIITPTFEFLLHRLSQQKARWDILRGRTVALSDTRLGIFSLHSTFWGRSRNRYLLLVIGTFVIAIELLFEFSFSSKLVAKSKTEQVWSQPDHQQRYLISSEEVHFMREPALLPVEAANIEGCVEGEFNMRRKEK-----TKDEFQQTIMEYSINGMYTVRRPYLSATDN 186

The following BLAST results are available for this feature:

BLAST of Gvermi796.t1 vs. uniprot

BLAST of Gvermi796.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IIJ0_9FLOR	3.220e-142	82.68	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3ITH0_9FLOR	1.960e-20	33.86	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 76..92
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..39
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 40..75
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 93..300
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 75..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_2952	contig	ScGOVlb_2952:325879..345646 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi796.t1	Gvermi796.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_2952 325879..345646 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi796.t1 ID=Gvermi796.t1|Name=Gvermi796.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=301bp
MGNQLFLNVSPSVWNVLKWALFTFMIMPAFEILTASLMASSATVRVQAGA
QLELFDSRLGIFALHSRYAGKRRTRLWLVLGSAVLVAMELWLEMSFSAAE
VAATVSEEVWVGPNYDERYMRQQNFSINDEPTRILETMSRRCIEGPRAMK
RDSVQQATVTVSDEAEVVAQYSLTADWTVRAAYMREVDSMVACDGVAETT
WASMEAPNIVSISGVEGFTPECGPARGVDSEWRQILFNESFTQRGTFVFD
GERALSTTMAVTSHILQMARGASMSATIQNTRYSFQRKAHVMGTENLQMF
*