Gvermi794.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi794.t1
Unique NameGvermi794.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length775
Homology
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BLAST of Gvermi794.t1 vs. uniprot
Match: A0A2V3J390_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J390_9FLOR)

HSP 1 Score: 228 bits (582), Expect = 2.000e-59
Identity = 122/286 (42.66%), Postives = 168/286 (58.74%), Query Frame = 0 
Query:   12 TNISAQETRARALWENHIVLSNDNRILIPETFESRWNVEVAPLLENQFHRMWNELPRMQCLNGENAFAAFSLQESESLPVTVSFEKVCNHDTLPGSCTQERQIHDLRQLTINLPSKSSRSSYSINIAMKRPIRPTDASIDPDVMV-GVVKGVVHFHLSDSSKIALVRYCDERRQHFSDSITQGFTPSNNIKHIISMYELKRMYALISKNRRGVSYFTELWDANELSTVVLDPVEHSWH----------PQIRTNVKRSRLRREDFVSGQHKLRDAAENIANDGETD 286
            +NI+   TR++ LW +H+V  + N+ILIPETFESR+N E+APLL+N   R+W +   ++C NGE  FA FSL+E+E+LP T+SF K C+       C QE ++ DLRQL I +PSKSS SSYS+ I + R           D  V GV +G V   LSD SK+AL RYC  +R HF+D  T      N+I+ +I++YELKR+Y ++S+ +    YF++LWD +ELS   +DPV+HS H          P  RT +    L   +  S    L       AN  ETD
Sbjct:  198 SNITQGHTRSKTLWIDHVVQGDQNQILIPETFESRFNNEIAPLLDNHLDRVWGDNALLRCPNGEQTFAMFSLKEAENLPATISFGKQCSRMKQLNPCFQEHEVSDLRQLQIQVPSKSSLSSYSVTILINRSADKNSEESPRDAQVLGVAQGTVQIVLSDLSKLALKRYCSRQRHHFADDATSTSNSENDIR-LITLYELKRLYGVLSRRKLDTGYFSQLWDVHELSKATIDPVQHSRHRRAGDKESFDPSSRTTLP---LNESEITSSSLGLEHQKNRFANASETD 479
The following BLAST results are available for this feature:
BLAST of Gvermi794.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J390_9FLOR2.000e-5942.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..726
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..722
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..760
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:296365..298689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi794.t1Gvermi794.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 296365..298689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi794.t1 ID=Gvermi794.t1|Name=Gvermi794.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=775bp
LYDALPWVFRVTNISAQETRARALWENHIVLSNDNRILIPETFESRWNVE
VAPLLENQFHRMWNELPRMQCLNGENAFAAFSLQESESLPVTVSFEKVCN
HDTLPGSCTQERQIHDLRQLTINLPSKSSRSSYSINIAMKRPIRPTDASI
DPDVMVGVVKGVVHFHLSDSSKIALVRYCDERRQHFSDSITQGFTPSNNI
KHIISMYELKRMYALISKNRRGVSYFTELWDANELSTVVLDPVEHSWHPQ
IRTNVKRSRLRREDFVSGQHKLRDAAENIANDGETDAISSELGNSEEKEA
LKGTELFRDASNATNSSLEVVNKKNTSDVSELASSINEYKNESTLSESVP
GQIPGQNDEQRETPDEDENYPDLPSDADESDDDDDSTTENQSQDEGGEVQ
LSGNARPDEQHSNTKQEPKLSETGESAPTTRPLSVSLPQYARDRDILSDP
RASGVAQSQPASIPHSQMNAEDAGKMIQEHSSQDQMNPLETSWNQSPTQN
SLSGLRNEEPNRSIPRRANDFPQSSQNDHPSQKSASSVENADGAIEYYQS
SQSSPRGSDRVPPLRDGSLQVGSAEHPMGNVQSAPGFSRVPYSEADRTGE
QHSQTAPVPIRRAEPSHEQIFPGRRYPTRQTGIPRQPQVRIDSRRFSPRM
TDLDAHQENHMSDNLPSSKKLDRPHAQPINGIHNHLPSRKESHLQIHGRS
PAEPVRDGRATADSRATARTQHHGEQIRGISTLQDGILYKDTSSQRSMTK
QPQKTGPYQDTIIPSMPRGMRHMS*
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