Gvermi778.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi778.t1
Unique NameGvermi778.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length484
Homology
BLAST of Gvermi778.t1 vs. uniprot
Match: A0A2V3IT31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT31_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 1.000e-70
Identity = 178/484 (36.78%), Postives = 275/484 (56.82%), Query Frame = 0
Query:    3 PSP-AADPSEQPLIAVKDYRPSTHGSSSSDGPDSTDEDCYQFEEQPSKPCPFAQTPRVSKYGKTYRTRHAAGSWEEKPVITTIETPVQLRCWSINGPDETGDHEDNREIVYMDEHITVHMKDMELINLQWELDNLRPGPPARIGKLSPLQKSHISRAHPLVLPRPKYHASAVGFGVP----KSCFDAVADMLTAEGRLVEEPSSLSDSSSDSADQFDFNCSSDTDSSPHFKFGLHSSTELHSMSKQSSDQLSEQSSSDERLAAALLSNTLTENDRQHEATVDVTLQSDSSESRLAQSQALLQFLALRVEKLVHVTASLQERVAVSFNERQQLQEQLLALKASCRSAGHPTSPRNADANGFANADQQACSKPRSPRK---KRKSTTREEDRLRKELMAEKQRTAQVQLENDRLLGVIFKLKKEMELEHDLMMRI-EKKLAQDQAC--RRAQRHRSVA-KPRNLSRDPKKKVEQRRRWIFSRSKSS 474
            PSP    P +QPL++V DYRPS +  +S +     ++D +    QP+ P PFA  P  + YG  + TR++ G W EKP IT + +P  LR W+INGPDE+ D ++ ++IVYMD+++ V+ K+++++  QWE+ N RPGPPA +GKLSPLQK  IS AHP+   +P  HA  +  G P    +SC  +V+ M+   GR V +P +LS+SS         + +  TDS        HSS     +   S D  SE   SD  + +         +    +    + + S        Q+QA +  L  RVE+L+ +   LQ++++    ++  +++QL A KA+  ++     PR +D+           S+ RSPR+   K++   RE+DR+R ELM EKQRTA++Q EN+RLLGVI KLK+E++ EH+  M + E +   + +   +  Q+ +S+  + R+ S+D KKKVEQRRRWIF R+K +
Sbjct:   31 PSPDPPTPEQQPLLSVTDYRPSANYVTSDE-----EDDEHHPPAQPA-PNPFANLPCETVYGAPHSTRYSKGIWTEKPRITHLHSPQPLRLWTINGPDESRDDDEEQQIVYMDDNVLVYTKNIQMLRAQWEILNQRPGPPASVGKLSPLQKFQISVAHPV---KPFNHA-VIPLGNPLSLSRSCVVSVSGMINTHGRTVPDPPALSESS---------HSTHQTDSPYEQLSDEHSSVINFRLDSSSDDHHSESDLSDSNIPSLPAKAPAPTSPAHRDLGGPLHVPSP-------QAQAQIDNLTARVEQLLALNTHLQQQLSDCRKDKANVEQQLSAAKAT-ENSNQSAPPRTSDSP----------SEERSPRRASMKKRRNAREDDRIRMELMEEKQRTAEMQSENERLLGVILKLKRELDGEHERNMALYETRFGAEPSVLDKGKQKAKSLLQRSRSASKDAKKKVEQRRRWIFGRTKGN 477          
The following BLAST results are available for this feature:
BLAST of Gvermi778.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT31_9FLOR1.000e-7036.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 375..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:185421..186872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi778.t1Gvermi778.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 185421..186872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi778.t1 ID=Gvermi778.t1|Name=Gvermi778.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=484bp
MCPSPAADPSEQPLIAVKDYRPSTHGSSSSDGPDSTDEDCYQFEEQPSKP
CPFAQTPRVSKYGKTYRTRHAAGSWEEKPVITTIETPVQLRCWSINGPDE
TGDHEDNREIVYMDEHITVHMKDMELINLQWELDNLRPGPPARIGKLSPL
QKSHISRAHPLVLPRPKYHASAVGFGVPKSCFDAVADMLTAEGRLVEEPS
SLSDSSSDSADQFDFNCSSDTDSSPHFKFGLHSSTELHSMSKQSSDQLSE
QSSSDERLAAALLSNTLTENDRQHEATVDVTLQSDSSESRLAQSQALLQF
LALRVEKLVHVTASLQERVAVSFNERQQLQEQLLALKASCRSAGHPTSPR
NADANGFANADQQACSKPRSPRKKRKSTTREEDRLRKELMAEKQRTAQVQ
LENDRLLGVIFKLKKEMELEHDLMMRIEKKLAQDQACRRAQRHRSVAKPR
NLSRDPKKKVEQRRRWIFSRSKSSTSKKCEPHM*
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