Gvermi4532.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4532.t1
Unique NameGvermi4532.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length365
Homology
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BLAST of Gvermi4532.t1 vs. uniprot
Match: A0A2V3IR44_9FLOR (Calponin-homology (CH) domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR44_9FLOR)

HSP 1 Score: 179 bits (454), Expect = 3.530e-46
Identity = 117/239 (48.95%), Postives = 146/239 (61.09%), Query Frame = 0 
Query:   61 EGKRDPSEAFLHETSPYSSSKMPAIARRSS-----NTVLGYVNMPLTPTSLVEVAEHTKEDLKNTGLSMKGS-----GFEDKFYDEHNKVPVRDIRTPTERRATAAGRDNVEDLSVELNAFKITSSKKSVDDVTSNPSSAGKLGALIRRISTATASPVPRMSICSKRNSSMSESIVCQNIMRTVLVVMRHVHRTPAHIRLVVLGMRIVLDFCQVQNRVADLVSVENCIDVLVTCAQFYR 289
            E  +DPSE      S   SS +   ARR S     + VL  VN+       V+     KE   N+GLS+          + K Y E  K   R                N+E+LSVEL++F ITSS+KSVDDV SNPSSA KL ALIRRISTATASP   MS   +  +S S S+VCQNI+RT+LVV+RH+HRT  HIRL+  G+ I+ DFC+VQ+RVAD++SVE+CIDV+VTCAQFYR
Sbjct: 1783 EENQDPSEF----PSNCGSSSVQYQARRFSPQRVASPVLASVNVH------VDTPPPVKETTGNSGLSVNSGLTSLQALQRKDYFEQTKFSPRSNDQKVRLNGAPEDASNLENLSVELSSFNITSSRKSVDDVMSNPSSASKLHALIRRISTATASPSRCMSDSLEHRTSESHSMVCQNIIRTILVVLRHLHRTSTHIRLIDRGITIIRDFCEVQDRVADVISVEDCIDVIVTCAQFYR 2011
The following BLAST results are available for this feature:
BLAST of Gvermi4532.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR44_9FLOR3.530e-4648.95Calponin-homology (CH) domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:2676349..2678247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4532.t1Gvermi4532.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 2676349..2678247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4532.t1 ID=Gvermi4532.t1|Name=Gvermi4532.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=365bp
MRSPFSFASKSKDRVELDGYNREEESHDPRKTISQAGLSPLKSASQSKND
AADLECHDCVEGKRDPSEAFLHETSPYSSSKMPAIARRSSNTVLGYVNMP
LTPTSLVEVAEHTKEDLKNTGLSMKGSGFEDKFYDEHNKVPVRDIRTPTE
RRATAAGRDNVEDLSVELNAFKITSSKKSVDDVTSNPSSAGKLGALIRRI
STATASPVPRMSICSKRNSSMSESIVCQNIMRTVLVVMRHVHRTPAHIRL
VVLGMRIVLDFCQVQNRVADLVSVENCIDVLVTCAQFYRVQKLQRVERRT
VAASESTTGRRPNHPTTPTPVNWRLTDKQPEALVDNEEFEESNFDAFHQR
FSLLFVNMNIVSPY*
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