Gvermi7086.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7086.t1
Unique NameGvermi7086.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length319
Homology
BLAST of Gvermi7086.t1 vs. uniprot
Match: A0A2V3INN8_9FLOR (Vitamin B12-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INN8_9FLOR)

HSP 1 Score: 477 bits (1228), Expect = 1.060e-167
Identity = 228/312 (73.08%), Postives = 263/312 (84.29%), Query Frame = 0
Query:    7 SPRIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLHRIEAFRPERGCASLLRDGNWIDASEL 318
            S RIVSLLPSATEI+FA+GAG +VVGVTHECDFPP ATRLP CTANLLPPNLSAKQIDDAV++VLTEDPHSIYRLE + +R LKPDVI+TQSLCAVCAVPESTVRD+SC FPF CRVVSSDPH+L +L++SILYIG AI     A+ALV +LK+R+ RV+QL     + P V VIEWPDPPYAPGHWVPDMI+ A G C LG+ G KS+R++W+QL  LQ DV+ICAFCGYDLYRNQ EC KV S  EW+ F KGA VYATNASAY+SRPGNRL+DGTELLAFLLHR+EA+RP R  AS LR+G W+D ++L
Sbjct:    7 SLRIVSLLPSATEIVFALGAGDHVVGVTHECDFPPAATRLPQCTANLLPPNLSAKQIDDAVARVLTEDPHSIYRLEADTVRELKPDVIITQSLCAVCAVPESTVRDISCNFPFECRVVSSDPHSLIQLFESILYIGRAIGYEKEAVALVVDLKARLARVQQLPIP-ANPPNVAVIEWPDPPYAPGHWVPDMISYAKGTCVLGKPGHKSERISWQQLAQLQVDVVICAFCGYDLYRNQIECDKVRSQNEWKAFVKGANVYATNASAYFSRPGNRLVDGTELLAFLLHRVEAYRPPRTSASQLRNGEWVDVADL 317          
BLAST of Gvermi7086.t1 vs. uniprot
Match: A0A538L1Y6_9ACTN (Cobalamin-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538L1Y6_9ACTN)

HSP 1 Score: 249 bits (635), Expect = 5.050e-78
Identity = 136/287 (47.39%), Postives = 186/287 (64.81%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDL---YRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLH 292
            RIVSL+PSATE+LFA+G GP+++ VTHECD+PP A  LP  T ++LPP LS+ +ID AV K LT    SIY L+ E+L  L+PD+IVTQ+LC+VCAV    VR ++       RV+S DPHT+ E+      + +A D    A+ LV +  +R+ RVR  V     +PRV  +EW DPP+A GHWVP +I  A G   LG +G+ S++ +WE++ S Q DV++   CGYD    YR + E H+    +E R    G EV A NA+AY+SRPG R++DG ELLA ++H
Sbjct:    2 RIVSLVPSATEMLFALGLGPDLIAVTHECDYPPAALELPRVTRDVLPPGLSSAEIDAAV-KELTLQGQSIYELDTEELHDLRPDLIVTQALCSVCAVSYDDVRAIAQEIETRPRVLSLDPHTVGEVLGDARTLAEATDRRDAAVELVRDAAARIDRVRLAVRG-ARRPRVAALEWLDPPFAAGHWVPQLIDFAGGEDVLGFAGENSEQRSWEEVISSQPDVVVVMPCGYDAQIAYR-EAEMHR----DELRALGAG-EVVAVNAAAYFSRPGPRIVDGLELLASIIH 280          
BLAST of Gvermi7086.t1 vs. uniprot
Match: A0A7L5YZD7_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Nocardioidaceae bacterium TaxID=1871072 RepID=A0A7L5YZD7_9ACTN)

HSP 1 Score: 244 bits (624), Expect = 2.780e-76
Identity = 132/284 (46.48%), Postives = 180/284 (63.38%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLH 292
            RIVSLLPS TEILF IGAG +VVGVT ECDFP EA      + + +P  LS ++IDD V   L      +Y L+ + L  L  D++VTQ LCAVCAV  S V D          VV+ DP+T+ E+ DS+L +GD     T A ALV++L +R+  VRQ V+   S+PRV+V+EW DPPYAPGHW+P+M+  A GI  LGE+G+KS R+TW+Q+ + + D+++CA CGY L      C    S  +  +F  G  V+  +A+A ++RPG R++DG E LA + H
Sbjct:    2 RIVSLLPSTTEILFGIGAGEDVVGVTFECDFPLEARTRQIVSTSAMPQGLSPREIDDFVGAALRRGD-DLYHLQADALIGLDADLVVTQDLCAVCAVDVSVVDDALSYLGCRADVVTVDPYTVGEVLDSVLMLGDRTGHPTEAAALVDSLHARLDSVRQAVAD-RSRPRVLVLEWTDPPYAPGHWIPEMVEIAGGIPVLGETGEKSFRITWDQVSATEPDLVVCAPCGYPL---DVACELAVSVAD--RFP-GVPVWGVDANASFARPGPRIVDGVEALAAIFH 277          
BLAST of Gvermi7086.t1 vs. uniprot
Match: A0A2P6G4E5_9ACTO (Cobalamin-binding protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2P6G4E5_9ACTO)

HSP 1 Score: 244 bits (622), Expect = 7.580e-76
Identity = 131/284 (46.13%), Postives = 183/284 (64.44%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLH 292
            RIVSLLPS+TEILF IGAG +VVGVT ECD+P EA      + + +P  +  ++ID  V+  L+     +YRL  + LR L PDV+VTQ LCAVCAV  S V D          VV+ DPH L E++DS+L +G   +    A  LV ++ SR+  VR  V++ ++ PRV+V+EW DPP+APGHW+P+M+  A G+  LG +G+KS RVTWEQ+ + + DV++CA CG+DL  +      VS +E  R    G  V+A +A+A ++RPG RL+DG E LA +L+
Sbjct:    2 RIVSLLPSSTEILFGIGAGADVVGVTFECDYPAEARDRRIVSTSSMPEGMGPREIDGFVAAALSRG-EDLYRLSADALRELNPDVLVTQDLCAVCAVDVSVVEDALKYLGCRADVVTMDPHNLSEVFDSVLVLGSQTNRVEAARELVASMNSRVEAVRLAVAA-SAHPRVLVLEWTDPPFAPGHWIPEMVEIAGGVPVLGTAGEKSYRVTWEQVEAAEPDVVVCAPCGFDLEGS------VSLSERVRDRFPGIPVWAVDANASFARPGPRLVDGIEALAGILN 277          
BLAST of Gvermi7086.t1 vs. uniprot
Match: A0A7C7NQU0_9BACT (Cobalamin-binding protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7C7NQU0_9BACT)

HSP 1 Score: 243 bits (619), Expect = 1.960e-75
Identity = 121/286 (42.31%), Postives = 181/286 (63.29%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKF--AKGAEVYATNASAYYSRPGNRLIDGTELLAFLLH 292
            RIVSLLPSATE++ A+G G  +VGVTHECDFPP    LPH T  LLP   S+ +ID  V + L  D  ++YRL+LE+L +L+PD+IVTQ+LC VC V ES V+  +C+ P T  +++ +P  L E++D++  +G     + HA  ++  L  R+  V     ++  +P+V ++EW DPP++ GHW P+++  A GI  LGE+GQ S+ + W ++ + + +VI  A CG+DL R  +E   +SS   W +    +   VY T+ S ++SRPG RL+D  E+LA  LH
Sbjct:    2 RIVSLLPSATEMVHALGLGHALVGVTHECDFPPGVEELPHLTRTLLPEGASSSEIDTLVRERLKTDG-ALYRLDLEELSNLEPDLIVTQALCDVCTVAESEVQAAACSLPSTPAILNLEPENLAEVFDALRQLGSVTGIADHAEDVIGVLTERVDAVVSRSQTVRKRPKVALLEWLDPPFSCGHWTPELVEIAGGIEGLGEAGQPSRTLDWVEVMAWKPEVIFIACCGFDLPRTLEEVSSLSSVSCWPELPAVQSGRVYVTDGSQFFSRPGPRLVDSLEILAHALH 286          
BLAST of Gvermi7086.t1 vs. uniprot
Match: S0ETP8_CHTCT (ABC-type Fe3+-hydroxamate transport system,periplasmic component n=3 Tax=Chthonomonas TaxID=1077265 RepID=S0ETP8_CHTCT)

HSP 1 Score: 241 bits (614), Expect = 1.110e-74
Identity = 123/286 (43.01%), Postives = 178/286 (62.24%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKF--AKGAEVYATNASAYYSRPGNRLIDGTELLAFLLH 292
            RIVSLLPSATEI+ A+G G  +VGVTHECD+PP   +LP  T  L+P   ++ +ID  V + L  D  ++Y L +E L  L PD+I+TQ+LC VCAV E+ VR  +C  P   RVV+ +P  L +LY++I  +G+A      A  L+ +LK+R+  VR+    I+ KPRV ++EW DPP+  GHW P+++  A GI  LG++G  S+ + WE+L + Q +V++ A CGY + R  Q+   +     W++    +   VY  N S Y+SRPG RL+D  E+LA  LH
Sbjct:    2 RIVSLLPSATEIVCALGLGEQLVGVTHECDYPPFVQQLPKVTKTLIPHTATSAEIDALVRERLKTDK-ALYTLNMEVLEKLHPDLIITQALCDVCAVAEAEVRAAACQLPGAPRVVNLEPACLDDLYEAIRSVGEATGHEDSAEQLIRSLKARVMAVRERTERISYKPRVTLLEWIDPPFTCGHWSPELVELAGGIEGLGKAGLPSRTMHWEELVAWQPEVLVIACCGYTVERTLQDMPLLEGRPRWQELPCVRSGRVYIINGSHYFSRPGPRLVDSLEILAHALH 286          
BLAST of Gvermi7086.t1 vs. uniprot
Match: A0A849PAX6_9MICO (Cobalamin-binding protein n=2 Tax=Dermacoccaceae TaxID=145357 RepID=A0A849PAX6_9MICO)

HSP 1 Score: 240 bits (612), Expect = 1.630e-74
Identity = 133/291 (45.70%), Postives = 176/291 (60.48%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLHRIEAFRP 299
            +IVSLLPS TEILF +GAG  VVGVT ECD PPEA      + + +P  L  +QID  VS+ ++     +Y L+   L  L  D++VTQ LCAVCAV  S V D       T  VV+ DPHTL  + DSI  +G   D    A  LVE+L++R+  V + V     +PRV+++EW DPP+ PGHWVP+MI  A GI  LG +G+KS+R TW+ + + Q DVI+CA CG+ L   +Q     S         +G  V+A +A+A Y+RPG RL+DG E LA LLH  +A RP
Sbjct:    3 KIVSLLPSTTEILFDLGAGDQVVGVTFECDTPPEALTRTIVSTSAMPEGLDPQQIDAWVSEAMSRG-EDLYHLDAGALAGLDADIVVTQDLCAVCAVDVSVVDDALAHLGCTAEVVTIDPHTLDHVLDSITRLGQVTDRDQTASELVESLRARLAAVEEDVQG-APRPRVMLLEWTDPPFTPGHWVPEMIERAGGIPLLGRAGEKSQRTTWQAIRAAQPDVIVCAPCGFGL---EQSSRLASELLASGNLPEGVPVWAVDANASYARPGPRLVDGVEDLAHLLHP-DATRP 287          
BLAST of Gvermi7086.t1 vs. uniprot
Match: A0A4R4TE85_9ACTN (Cobalamin-binding protein (Fragment) n=1 Tax=Streptomyces hainanensis TaxID=402648 RepID=A0A4R4TE85_9ACTN)

HSP 1 Score: 239 bits (610), Expect = 2.310e-74
Identity = 136/292 (46.58%), Postives = 177/292 (60.62%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLHRIEAFRPE 300
            RIVSLLPSATEILFAIGAG +VVGVT ECD PPEA      + + LP +LS   ID  VS+ +      +Y L+   L  L  D++VTQ LCAVCAV  STVRD       +  V++ DPHTLPE+ DSIL IG A  +   A  LV  L  R+  VR  V++    P  +V+EW DPP+APGHWVPDM+ AA G C LG SG +S R  WE +    A V++CA CG+ L  + +   +V+      +   G  ++A +A+A ++RPG RL+DG E LA +LH   A  P+
Sbjct:    2 RIVSLLPSATEILFAIGAGDDVVGVTFECDHPPEARARRIVSTSTLPDDLSPAGIDRLVSERMAAG-EDLYHLDRGALAGLAADLVVTQDLCAVCAVDVSTVRDALDHLACSAEVLTVDPHTLPEVLDSILVIGAATGTRERAERLVGRLSDRLAAVRARVAAEEPVP-ALVLEWTDPPFAPGHWVPDMVEAAGGRCVLGTSGARSYRTDWEAVADAGAAVVVCAPCGFGLDESARLAGQVAD-----RLPPGVPLWAVDANASFARPGPRLVDGVEALAGVLHPAAAGPPD 286          
BLAST of Gvermi7086.t1 vs. uniprot
Match: UPI00140D9E00 (ABC transporter substrate-binding protein n=1 Tax=Phytoactinopolyspora limicola TaxID=2715536 RepID=UPI00140D9E00)

HSP 1 Score: 239 bits (610), Expect = 2.970e-74
Identity = 138/302 (45.70%), Postives = 182/302 (60.26%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSK--VLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLHRIEAFRPERGCASLLR 308
            RIVSLLPS TEILFA+GAG +VVGVT ECD+PP+A      + + LP  L   QID  VS   V  ED   +Y L+   L  L  D+++TQ LCAVCAV  STV D          V++ DPHTL E+  S+L IG+A  +      LV +L  R+  VR  +S+ + K R +V+EWPDPP+APGHWVPDMI AA G+C LG SG++S R  WE++ +  ADV+I A CGY L  + +    V + E       G  V+A +A+A ++RPG RL+DG E LA + H   A  P+   A  +R
Sbjct:    2 RIVSLLPSVTEILFALGAGDDVVGVTFECDYPPQARTKRIVSTSALPDGLEPAQIDQLVSARMVAGED---LYHLDEGALAGLDADLVITQDLCAVCAVDVSTVHDALDYLACRAEVLTVDPHTLTEVLASVLTIGEATGTRPAGEDLVASLTGRLDVVRDRISTQSPK-RALVLEWPDPPFAPGHWVPDMIAAAGGVCVLGRSGERSFRSGWEEIVAAGADVVISAPCGYGLETSIRLAEDVVAGEF---LPTGLPVWAVDANASFARPGPRLVDGVEALAGIFHPDVAAAPDAALARRVR 296          
BLAST of Gvermi7086.t1 vs. uniprot
Match: A1SF95_NOCSJ (Periplasmic binding protein n=1 Tax=Nocardioides sp. (strain ATCC BAA-499 / JS614) TaxID=196162 RepID=A1SF95_NOCSJ)

HSP 1 Score: 238 bits (607), Expect = 5.430e-74
Identity = 130/284 (45.77%), Postives = 173/284 (60.92%), Query Frame = 0
Query:    9 RIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCTANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLCAVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTHAIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITAANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVSSTEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLH 292
            RIVSLLPS TEILFAIGAGP+VVGVT ECD+P EA      + + +P  L+  +ID  V   L+     +Y L  + L  L  D++VTQ LCAVCAV  S V D       T  V++ DPHTL E+ DSIL +G     +  A ALV   ++R+      V+    +PRV+++EW DPPYAPGHWVP+MI AA G+  LG+ G KS+RV WEQ+     DV++CA CGYDL   +     + ++        G  V+A +A+A ++RPG RL+DG E LA +LH
Sbjct:    2 RIVSLLPSTTEILFAIGAGPDVVGVTFECDYPAEARARTVVSTSAMPSGLTPAEIDAYVVGALSRG-EDLYHLAADALAGLDADLVVTQDLCAVCAVDVSVVDDALAHLGCTAEVLTIDPHTLDEVLDSILLLGRVTGRTVEATALVAAQRNRLAAAAARVAG-RPRPRVMLLEWTDPPYAPGHWVPEMIEAAGGVALLGKPGAKSERVLWEQVHEAAPDVVVCAPCGYDLEGARSLAADLVASGV---LPSGVPVHAVDANAAWARPGTRLVDGVEELAAILH 280          
The following BLAST results are available for this feature:
BLAST of Gvermi7086.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INN8_9FLOR1.060e-16773.08Vitamin B12-binding protein n=1 Tax=Gracilariopsis... [more]
A0A538L1Y6_9ACTN5.050e-7847.39Cobalamin-binding protein n=1 Tax=Actinomycetia ba... [more]
A0A7L5YZD7_9ACTN2.780e-7646.48ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A2P6G4E5_9ACTO7.580e-7646.13Cobalamin-binding protein n=2 Tax=Bacteria TaxID=2... [more]
A0A7C7NQU0_9BACT1.960e-7542.31Cobalamin-binding protein n=1 Tax=Gemmatimonadetes... [more]
S0ETP8_CHTCT1.110e-7443.01ABC-type Fe3+-hydroxamate transport system,peripla... [more]
A0A849PAX6_9MICO1.630e-7445.70Cobalamin-binding protein n=2 Tax=Dermacoccaceae T... [more]
A0A4R4TE85_9ACTN2.310e-7446.58Cobalamin-binding protein (Fragment) n=1 Tax=Strep... [more]
UPI00140D9E002.970e-7445.70ABC transporter substrate-binding protein n=1 Tax=... [more]
A1SF95_NOCSJ5.430e-7445.77Periplasmic binding protein n=1 Tax=Nocardioides s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002491ABC transporter periplasmic binding domainPFAMPF01497Peripla_BP_2coord: 10..258
e-value: 4.2E-18
score: 65.7
IPR002491ABC transporter periplasmic binding domainPROSITEPS50983FE_B12_PBPcoord: 9..295
score: 19.716717
NoneNo IPR availableGENE3D3.40.50.1980Nitrogenase molybdenum iron protein domaincoord: 161..294
e-value: 4.9E-19
score: 70.4
NoneNo IPR availableGENE3D3.40.50.1980Nitrogenase molybdenum iron protein domaincoord: 6..158
e-value: 1.1E-26
score: 95.2
NoneNo IPR availablePANTHERPTHR42860:SF1VITAMIN B12-BINDING PROTEINcoord: 5..296
NoneNo IPR availablePANTHERPTHR42860VITAMIN B12-BINDING PROTEINcoord: 5..296
NoneNo IPR availableCDDcd01144BtuFcoord: 9..288
e-value: 7.0589E-63
score: 197.907
NoneNo IPR availableSUPERFAMILY53807"Helical backbone" metal receptorcoord: 9..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1564352..1565308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7086.t1Gvermi7086.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1564352..1565308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7086.t1 ID=Gvermi7086.t1|Name=Gvermi7086.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=319bp
MGKSNQSPRIVSLLPSATEILFAIGAGPNVVGVTHECDFPPEATRLPHCT
ANLLPPNLSAKQIDDAVSKVLTEDPHSIYRLELEKLRSLKPDVIVTQSLC
AVCAVPESTVRDVSCTFPFTCRVVSSDPHTLPELYDSILYIGDAIDSSTH
AIALVENLKSRMGRVRQLVSSITSKPRVVVIEWPDPPYAPGHWVPDMITA
ANGICTLGESGQKSKRVTWEQLFSLQADVIICAFCGYDLYRNQQECHKVS
STEEWRKFAKGAEVYATNASAYYSRPGNRLIDGTELLAFLLHRIEAFRPE
RGCASLLRDGNWIDASEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002491ABC_transptr_periplasmic_BD