Gvermi6982.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6982.t1
Unique NameGvermi6982.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length892
Homology
BLAST of Gvermi6982.t1 vs. uniprot
Match: A0A2V3J5N6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N6_9FLOR)

HSP 1 Score: 984 bits (2544), Expect = 0.000e+0
Identity = 497/895 (55.53%), Postives = 637/895 (71.17%), Query Frame = 0
Query:    5 SDRNLKILSLLFVLSLLFVTLLQYNDRAYSRVEYSVDRVLNALYSTPVDSEPAQSRGRRP-RQLFLSPKHYQRDQAGAIDVFEKDGISVCRIYRVCRMRNGEVYYPRWMKDHLGILQEKCGLVDVHFAPIKSLKNEFGMSAYYDWLGPNMPTATLIKFVSNPLSYFFAHKAATRSKLE--QKSTNSSITRTCISAAADESGTSTSIICSSRPEGRIAHPAIVVNTDDDQPKAHADFYQLVRATFKKKHGETMNIFDPDSKALKRPKLCFRSVIASATADRFAGVTQRTANPSQNESVIQWSFKHEKDARSGNVPQGGKTLSLYSDKNETFTDGRTSAAKNNTEET---LPTFEELDSSRFQSEPGESEATIRLETEGGVELFTHRAVDGVQWNTSYPGKPSEHTYGICRVYRACRGPDQSLVLPNWMNKSAERLRNHCGIESMTFLQDDEFDLMFEKVKVSSRNRRARNPPASHPDMEVFFDLIGTREYRTQKHHFVTDFLHDGIHALDALYNRDESGMTSFRRRCVYRPDSKVGWEAREEGTCAHGPMKQDDLKPLFLVDNRFQRSSVHGQFIQQLASMMPPKGSSGPRFILALELSKSGYKHSTCFRSIVVTRNAYPPSSVLEAAEGNVFFAQNNISRDAPKPIVEGKCRVRVALLAAQKQTKQNTWAKGEGELINEDDIMSAIKSVGHATA--KLAGAVNSSIEVTKVKRAGHNVGEDKKRIQESEIIISPNNPSLTSIVFARPHTLVVDIQPFSYAAGPYRSFAGAFNLGYRSVMANPDYETFAKCVDDNYKMDWSMNVSDTELEVNKQGLLKLYREAGDRFNGAVSDLHLEHRKTNKGLTRKYYIPKERVCARAQRLKVDANLVAVIVGKHAANLCQRHAEQTSKLEAVL 891
            S+R LK L+LLF+  L+  T L+ N      +E S+DRVL+   + PVD+E      R+  R++FL P +YQRD+ GAID+FEK+G S+CRIY+VCRM+NG+VYYPRWMK HL IL+EKCGL +++FAP+KSLKNEFG   YYDWLGPN+ T  L+KF  NP S+FFAHK AT+S L+  Q    SS+ RTCI A      +  S +C S+PEG IAHPAI+VNT   QPKA +DFY + R T+ +KHGE++ I DP S+ L+RP +CFRS+IASA+AD  AG T      +++ +                                       S+   NT  T   L TF+E + ++   E G+     ++E+EGGVELFTHRAVDG  WN S   + S+H YGICR+YRACRG DQS+VLPNWM  ++ +L+ HCGI+S+TFLQDDEFDLM+EKV+VSSRNRR  N   S PDMEVFFDLIG REYR QKHHFVTDFL DGIHALDAL+NRDE+GMTSF+R+C+YRPDS V   A  +G CAH P+K D+L+P+ ++++R + S  HG++I+QLA+MMPPK   GP  +L  ELS+SGY  STCFRSIV TRN+YPPSSVL+AAE NVFFAQNNISR+  K   EG+C V V +L  QK  K   W K +GEL NEDDI++AI+++G A      +    ++I V ++K +G+++ EDKK IQ+S IIIS NNPSLT IVFA+P T+VV++QPFSY+AGPYRSFAG   L Y+SVMAN DY+ F  CV D+YK DW+ NVS +E+E  K+GLLKL+R+A D FNGA SDLHLE R+ +KG  R+++IP+ERVCARAQRL VDANL+A+IVGK AA LCQ+HA+   +L+AVL
Sbjct:    5 SERTLKGLTLLFLTLLILFTFLEQNQTPNLHLEASLDRVLSYFSTVPVDAESETGHRRQEKRKVFLPPAYYQRDRGGAIDIFEKNGASMCRIYKVCRMKNGQVYYPRWMKKHLSILEEKCGLTELNFAPVKSLKNEFGTPMYYDWLGPNLRTPALLKFSKNPTSHFFAHKNATKSLLDTNQNENVSSVRRTCIPAPKHIRKSDMSAVCDSQPEGHIAHPAILVNTIPGQPKAESDFYSVYRRTYMEKHGESVTILDPKSRLLRRPIVCFRSIIASASADHNAGFT------AESTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSSRVLNTSTTYGMLNTFDEYEDTQLNGEHGQQHLVHKMESEGGVELFTHRAVDGQSWNNSKQEELSKHVYGICRLYRACRGADQSIVLPNWMKNNSVQLQEHCGIDSLTFLQDDEFDLMYEKVRVSSRNRRLLNSRGSQPDMEVFFDLIGMREYRAQKHHFVTDFLRDGIHALDALFNRDETGMTSFKRQCIYRPDSNVRKAALRDGVCAHAPVKIDELRPVLILNDRMKSSGAHGKYIRQLAAMMPPKKGRGPGILLNSELSRSGYNQSTCFRSIVFTRNSYPPSSVLDAAERNVFFAQNNISRETAKGSGEGECEVHVTMLRPQKHKKSKRWFKNQGELTNEDDIVAAIETLGKAILDDSRSKEQTANIVVRRMKHSGYDIEEDKKLIQQSHIIISTNNPSLTGIVFAKPGTVVVEVQPFSYSAGPYRSFAGTLKLDYQSVMANADYQAFEGCVKDSYKKDWTGNVSASEMEAKKEGLLKLFRDARDNFNGASSDLHLEKRELDKGGLRQFHIPQERVCARAQRLVVDANLIAIIVGKKAAALCQKHAKHRLRLDAVL 893          
BLAST of Gvermi6982.t1 vs. uniprot
Match: A0A6T6BHC4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BHC4_9RHOD)

HSP 1 Score: 86.7 bits (213), Expect = 8.630e-14
Identity = 118/492 (23.98%), Postives = 211/492 (42.89%), Query Frame = 0
Query:  406 CRVYRACRGPDQSLVLPNWMNKSAERLRNHCGIESMTFLQDDEFDLMFEKVKVSSRNRRARNPPASHPDMEVFFDLIGTREYRTQKHHFVTDFLHDGIHALDALYNRDESGMTSFRRRCVYRPDSKVGWEAREEGTCAHGPMKQDDLKPLFLVDNRFQRSSVHGQFIQQLASMMPPKGSSGPRFILALELSKSGYKHSTCFRSIVVTRN------AYPPSSVLEAAEGNVFFAQNNISRDAPKPIVEGKCRVRVALLAAQKQTKQNTWAKGEGELINEDDIMSAIKS-VGHATAKLAGAVNSSIEVTKVKRAGHNVGEDKKRIQESEIIISPNNPSLTSIVFARPHTLVVDIQPFSYAAGPYRSFAGAFNLGYRSVMANPDYETFAKCVDD-NYKMDWSMNVSDTELEVNKQGLLKLYREAG---DRFNGAVSDLHLEHRKTNKGLTRKYYIPKERVCARAQRLKVDANLVAVIVGKHAANLCQRHAEQTSK 886
            CRVYRACR  D +LVLP  +  S + +  +CG+ ++                     R    P AS  +  +  D I     R+   HF  D +  G+ ALDA       G        ++  D + G   R+ G   +G      ++P  L+++++   S +  ++ +  +++PP    G R ++ L   +   +H  CFRS +V+        A+ PSS         F+  + +SR+    +  G   V + ++  + +  ++   K    + N DD+ +A++S    A A++   V+   E++  ++           +Q +++I+  +  +L ++VFAR    +V++ P++Y AGP+   A +  L +   +A PD E F +C+D  N   D S   +     +  Q L   + EA     +   +V    L+    + G      +   R CARAQRL V+   VA      A  L    A  TS+
Sbjct:  174 CRVYRACRDADGTLVLPVSLQWSKKLV--YCGVGALG----------------PGTPRFEPTPNASALEY-IDSDWISGTVARSHMPHFAPDVM-PGLFALDAALAVLLGGPNHSSEVRLFAFD-RAGH--RKPGALLNG------IRPTVLIEDKWASLS-NASWVNKFVALIPPV-VDGARKVVPL---RDHGRHRICFRSALVSSPRTDFGVAFGPSSS--------FYGGSGLSREEVAAVDIGSRVVAILVINRRGEASKDGKVKLGRNIDNVDDLDAALQSGTPGAMARVVTRVHYFEELSFEQQVAE--------VQAADVIVGAHGAALANMVFARRGLTLVEVVPYAYYAGPFDGQARSLGLRFVRHVAAPDPERFDQCIDHYNPPADGSAGAARF---LAAQRLKARFAEAARGVTQHGESVFKFQLQDPGLDLG------VAFVRPCARAQRLFVNVTEVAASALAAAEALVIARAVPTSE 606          
BLAST of Gvermi6982.t1 vs. uniprot
Match: A0A1X6NXK0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXK0_PORUM)

HSP 1 Score: 74.3 bits (181), Expect = 8.920e-10
Identity = 87/372 (23.39%), Postives = 146/372 (39.25%), Query Frame = 0
Query:  579 MPPKGSSGPRFILALELSKSGYKHSTCFRSIVVTRNAYPPSSVLEAAEGNVFFAQNNISRDAP--------------KPIVEGKCRVRVALLAAQKQTKQNTWAKGEGE-----------LINEDDIMSAI--KSVGHATAK-LAGAVNSSIEVTKVKRAGHNVGEDKKRIQESEIIISPNNPSLTSIVFARPHTLVVDIQPFSYAAGPYRSFAGAFNLGYRSVMANPDYETFAKCVDDNYKMD-WSM------------------------------NVSDTELEVNKQGLLKLYREAGDRFN--GAVSDLHLEHRKTNKGLTR-----------KYYIPKERVCARAQRLKVDANLVAVIVGKHAANLCQ 878
            +PP+  S PR +   ++ ++G   +TC+RS+V      PP   L  +    FFA N ++R  P              +P   G                                     L N + +++A+  ++     A+ L G +  ++ V  V+ A   V      +Q + ++++P +PSL ++++ RP + VV++ PF+Y  G   + A A  + +R V+A PD  TF  CV+   KMD W                                      ++     LL  +  A D +   G V  L L+     +G+ R           +  +P+ER CARAQRL  D   VA +V   A ++CQ
Sbjct:  790 VPPR--SWPRPLYGGDVRRAGDGVTTCYRSVVAAPKRLPPPEALPGSL--TFFADNRLARSPPXXXXXXXXXSVAVVQPHEAGPAGXXXXXXXXXXXXXXXXXXXXXXXARPPPHGFLPALANAEALITALHRRAASSVNARRLRGGL--TLRVRLVRPAAVGVRALMGALQGAHVVLAPTDPSLGAVLYVRPGSTVVEVSPFAYYGGGVAALAAALGVAHRRVVAPPDSATFRACVEA-VKMDGWGAAGRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGAVAALLAAWDAAADDYAAFGKVDGLRLD-----QGVGRGRGVGGGDAGDRLRLPRERECARAQRLAPDPAAVAAVVVAAAVDVCQ 1149          
The following BLAST results are available for this feature:
BLAST of Gvermi6982.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5N6_9FLOR0.000e+055.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6T6BHC4_9RHOD8.630e-1423.98Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NXK0_PORUM8.920e-1023.39Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..891
NoneNo IPR availableTMHMMTMhelixcoord: 12..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:823902..826577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6982.t1Gvermi6982.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 823902..826577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6982.t1 ID=Gvermi6982.t1|Name=Gvermi6982.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=892bp
MLFASDRNLKILSLLFVLSLLFVTLLQYNDRAYSRVEYSVDRVLNALYST
PVDSEPAQSRGRRPRQLFLSPKHYQRDQAGAIDVFEKDGISVCRIYRVCR
MRNGEVYYPRWMKDHLGILQEKCGLVDVHFAPIKSLKNEFGMSAYYDWLG
PNMPTATLIKFVSNPLSYFFAHKAATRSKLEQKSTNSSITRTCISAAADE
SGTSTSIICSSRPEGRIAHPAIVVNTDDDQPKAHADFYQLVRATFKKKHG
ETMNIFDPDSKALKRPKLCFRSVIASATADRFAGVTQRTANPSQNESVIQ
WSFKHEKDARSGNVPQGGKTLSLYSDKNETFTDGRTSAAKNNTEETLPTF
EELDSSRFQSEPGESEATIRLETEGGVELFTHRAVDGVQWNTSYPGKPSE
HTYGICRVYRACRGPDQSLVLPNWMNKSAERLRNHCGIESMTFLQDDEFD
LMFEKVKVSSRNRRARNPPASHPDMEVFFDLIGTREYRTQKHHFVTDFLH
DGIHALDALYNRDESGMTSFRRRCVYRPDSKVGWEAREEGTCAHGPMKQD
DLKPLFLVDNRFQRSSVHGQFIQQLASMMPPKGSSGPRFILALELSKSGY
KHSTCFRSIVVTRNAYPPSSVLEAAEGNVFFAQNNISRDAPKPIVEGKCR
VRVALLAAQKQTKQNTWAKGEGELINEDDIMSAIKSVGHATAKLAGAVNS
SIEVTKVKRAGHNVGEDKKRIQESEIIISPNNPSLTSIVFARPHTLVVDI
QPFSYAAGPYRSFAGAFNLGYRSVMANPDYETFAKCVDDNYKMDWSMNVS
DTELEVNKQGLLKLYREAGDRFNGAVSDLHLEHRKTNKGLTRKYYIPKER
VCARAQRLKVDANLVAVIVGKHAANLCQRHAEQTSKLEAVL*
back to top