Gvermi6987.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6987.t1
Unique NameGvermi6987.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length159
Homology
BLAST of Gvermi6987.t1 vs. uniprot
Match: A0A2V3J4R9_9FLOR (Iron-sulfur cluster assembly protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4R9_9FLOR)

HSP 1 Score: 243 bits (619), Expect = 3.670e-80
Identity = 120/149 (80.54%), Postives = 133/149 (89.26%), Query Frame = 0
Query:    1 MIRTTVTALNRAHGSALTNLAKRSRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQ 149
            M R    +++RA G   + + ++ R Y DKVIDHYENPRNVGSLNK DKNVGTGLVGAPACGDVMKLQIRV+++GEI+ESAFKTFGCGSAIASSSLATEWVKGRNV+DATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAA+KDLK KQ
Sbjct:    1 MNRIAAASISRARGPFRSTIGRQIRKYDDKVIDHYENPRNVGSLNKNDKNVGTGLVGAPACGDVMKLQIRVDENGEIIESAFKTFGCGSAIASSSLATEWVKGRNVNDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAVKDLKTKQ 149          
BLAST of Gvermi6987.t1 vs. uniprot
Match: R7Q413_CHOCR (Iron-sulfur cluster assembly protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q413_CHOCR)

HSP 1 Score: 238 bits (608), Expect = 1.740e-78
Identity = 121/155 (78.06%), Postives = 134/155 (86.45%), Query Frame = 0
Query:    1 MIRTTVTALNRAHGSALTNLAKRSRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDK--QGGAQ 153
            M R +V A+ +A  +   + A  +R YHDKVIDHYENPRNVGS++K DKNVGTGLVGAPACGDVMKLQIRVN+DGEIVE+AFKTFGCGSAIASSSLATEWVKG NVDDA KIKNSDIAKEL LPPVKLHCSMLAEDAIKAAI +LK+K  + GAQ
Sbjct:    1 MQRLSVAAVTKARHAVRPSYASAARAYHDKVIDHYENPRNVGSMDKNDKNVGTGLVGAPACGDVMKLQIRVNNDGEIVETAFKTFGCGSAIASSSLATEWVKGMNVDDARKIKNSDIAKELSLPPVKLHCSMLAEDAIKAAIANLKEKRTEAGAQ 155          
BLAST of Gvermi6987.t1 vs. uniprot
Match: L7M1F1_RHIPC (Putative iron binding protein involved in fe-s cluster formation n=8 Tax=Ixodidae TaxID=6939 RepID=L7M1F1_RHIPC)

HSP 1 Score: 218 bits (555), Expect = 2.950e-70
Identity = 106/133 (79.70%), Postives = 121/133 (90.98%), Query Frame = 0
Query:   24 SRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQGGAQSAP 156
            S  YH+KVIDHYENPRNVGSLNK+DKNVGTGLVGAPACGDVMKLQI+V++ G+IV++ FKTFGCGSAIASSSLATEW+KG+NV++A KIKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K K+G  Q AP
Sbjct:   24 SASYHEKVIDHYENPRNVGSLNKDDKNVGTGLVGAPACGDVMKLQIKVDESGKIVDAKFKTFGCGSAIASSSLATEWIKGKNVNEAMKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYKRKRGD-QEAP 155          
BLAST of Gvermi6987.t1 vs. uniprot
Match: A0A6G4ZW97_RHIMP (Putative iron binding protein involved in fe-s cluster formation (Fragment) n=6 Tax=Ixodidae TaxID=6939 RepID=A0A6G4ZW97_RHIMP)

HSP 1 Score: 219 bits (558), Expect = 3.360e-70
Identity = 104/127 (81.89%), Postives = 118/127 (92.91%), Query Frame = 0
Query:   24 SRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQG 150
            S  YH+KVIDHYENPRNVGSLNK+DKNVGTGLVGAPACGDVMKLQI+V+D G+IV++ FKTFGCGSAIASSSLATEW+KG+NV++A KIKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K K+G
Sbjct:   60 SASYHEKVIDHYENPRNVGSLNKDDKNVGTGLVGAPACGDVMKLQIKVDDSGKIVDAKFKTFGCGSAIASSSLATEWIKGKNVNEAMKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYKRKRG 186          
BLAST of Gvermi6987.t1 vs. uniprot
Match: A0A5B8MHW8_9CHLO (Iron-sulfur cluster assembly protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHW8_9CHLO)

HSP 1 Score: 217 bits (553), Expect = 4.420e-70
Identity = 103/125 (82.40%), Postives = 113/125 (90.40%), Query Frame = 0
Query:   24 SRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDK 148
            SR YH+KVIDHYENPRNVGS +K DKNVGTGLVGAPACGDVMKLQI+V+DDG I++S FKTFGCGSAIASSSLATEWVKGR +DD  +IKN DIAK L LPPVKLHCSMLAEDAIKAA+KDL+ K
Sbjct:   31 SRLYHEKVIDHYENPRNVGSFDKNDKNVGTGLVGAPACGDVMKLQIKVDDDGNIIDSCFKTFGCGSAIASSSLATEWVKGRTLDDVVEIKNQDIAKHLSLPPVKLHCSMLAEDAIKAAVKDLRAK 155          
BLAST of Gvermi6987.t1 vs. uniprot
Match: A0A0X3PYZ4_SCHSO (NifU_N domain-containing protein (Fragment) n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3PYZ4_SCHSO)

HSP 1 Score: 218 bits (555), Expect = 6.500e-70
Identity = 102/126 (80.95%), Postives = 118/126 (93.65%), Query Frame = 0
Query:   24 SRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQ 149
            S  YH+KV+DHYENPRNVGSLNK+DKNVGTGLVGAPACGDVMKLQI+V+D+G I+++ FKTFGCGSAIASSSLATEWVKG+ +D+AT IKN++IAKEL+LPPVKLHCSMLAEDAIKAA+ DLK KQ
Sbjct:   64 SAAYHEKVLDHYENPRNVGSLNKKDKNVGTGLVGAPACGDVMKLQIKVDDEGRIIDAKFKTFGCGSAIASSSLATEWVKGKTMDEATTIKNTEIAKELRLPPVKLHCSMLAEDAIKAAVSDLKAKQ 189          
BLAST of Gvermi6987.t1 vs. uniprot
Match: A0A7S3BYI5_9VIRI (Iron-sulfur cluster assembly protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYI5_9VIRI)

HSP 1 Score: 219 bits (557), Expect = 6.600e-70
Identity = 102/129 (79.07%), Postives = 120/129 (93.02%), Query Frame = 0
Query:   21 AKRSRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQ 149
            A+ +R YH KV+DHYENPRNVGS ++ED NVGTGLVGAPACGDVMKLQI+V+DDGEIV+S FKTFGCGSAIASSS+ATEW+KG++V++A+ +KNSDIAKELKLPPVKLHCSMLAEDAIKAAI D+K K+
Sbjct:   75 ARAARAYHQKVVDHYENPRNVGSFDREDPNVGTGLVGAPACGDVMKLQIKVDDDGEIVDSCFKTFGCGSAIASSSVATEWIKGKSVEEASGVKNSDIAKELKLPPVKLHCSMLAEDAIKAAIADVKQKK 203          
BLAST of Gvermi6987.t1 vs. uniprot
Match: A0A6S7FGP8_PARCT (Iron-sulfur cluster assembly scaffold n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FGP8_PARCT)

HSP 1 Score: 217 bits (552), Expect = 6.930e-70
Identity = 104/125 (83.20%), Postives = 116/125 (92.80%), Query Frame = 0
Query:   27 YHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQGG 151
            YH KVIDHYENPRNVGS++K+D NVGTGLVGAPACGDVMKLQI+V+DDG+IV++ FKTFGCGSAIASSSLATEWVKG+NVDDA KIKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K K+ G
Sbjct:   28 YHAKVIDHYENPRNVGSMDKDDDNVGTGLVGAPACGDVMKLQIKVSDDGKIVDAKFKTFGCGSAIASSSLATEWVKGKNVDDALKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALNDYKVKKEG 152          
BLAST of Gvermi6987.t1 vs. uniprot
Match: G3MNN3_AMBMU (NifU_N domain-containing protein n=4 Tax=Amblyomma TaxID=6942 RepID=G3MNN3_AMBMU)

HSP 1 Score: 217 bits (552), Expect = 8.170e-70
Identity = 103/127 (81.10%), Postives = 117/127 (92.13%), Query Frame = 0
Query:   24 SRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQG 150
            S  YH+KVIDHYENPRNVGSLNK+DKNVGTGLVGAPACGDVMKLQI+V+D G+I+++ FKTFGCGSAIASSSLATEW+KG+NV +A KIKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K K+G
Sbjct:   23 SSSYHEKVIDHYENPRNVGSLNKDDKNVGTGLVGAPACGDVMKLQIKVDDYGKIIDAKFKTFGCGSAIASSSLATEWIKGKNVTEAMKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALNDYKRKRG 149          
BLAST of Gvermi6987.t1 vs. uniprot
Match: C1BQ23_CALRO (Iron-sulfur cluster assembly enzyme ISCU, mitochondrial n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=C1BQ23_CALRO)

HSP 1 Score: 215 bits (548), Expect = 2.030e-69
Identity = 107/143 (74.83%), Postives = 122/143 (85.31%), Query Frame = 0
Query:   15 SALTNLAKR--------SRCYHDKVIDHYENPRNVGSLNKEDKNVGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQ 149
            S L NLA R        SR YHDKVIDHYENPRNVG LN + +NVGTGLVGAPACGDVMKLQI V+DDG+IV++ FKTFGCG+AIASSSLATEW+KG+N+++A+ IKNSDIAKEL LPPVKLHCSMLAEDAI+AA+KD K KQ
Sbjct:    5 SPLRNLALRNVPLGAISSRSYHDKVIDHYENPRNVGKLNPKSRNVGTGLVGAPACGDVMKLQIEVDDDGKIVDAKFKTFGCGAAIASSSLATEWIKGKNLNEASTIKNSDIAKELALPPVKLHCSMLAEDAIQAALKDYKKKQ 147          
The following BLAST results are available for this feature:
BLAST of Gvermi6987.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4R9_9FLOR3.670e-8080.54Iron-sulfur cluster assembly protein n=1 Tax=Graci... [more]
R7Q413_CHOCR1.740e-7878.06Iron-sulfur cluster assembly protein n=1 Tax=Chond... [more]
L7M1F1_RHIPC2.950e-7079.70Putative iron binding protein involved in fe-s clu... [more]
A0A6G4ZW97_RHIMP3.360e-7081.89Putative iron binding protein involved in fe-s clu... [more]
A0A5B8MHW8_9CHLO4.420e-7082.40Iron-sulfur cluster assembly protein n=1 Tax=Chlor... [more]
A0A0X3PYZ4_SCHSO6.500e-7080.95NifU_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S3BYI5_9VIRI6.600e-7079.07Iron-sulfur cluster assembly protein n=1 Tax=Prasi... [more]
A0A6S7FGP8_PARCT6.930e-7083.20Iron-sulfur cluster assembly scaffold n=2 Tax=Para... [more]
G3MNN3_AMBMU8.170e-7081.10NifU_N domain-containing protein n=4 Tax=Amblyomma... [more]
C1BQ23_CALRO2.030e-6974.83Iron-sulfur cluster assembly enzyme ISCU, mitochon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPFAMPF01592NifU_Ncoord: 27..149
e-value: 7.1E-54
score: 181.4
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPANTHERPTHR10093IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOGcoord: 10..150
IPR002871NIF system FeS cluster assembly, NifU, N-terminalCDDcd06664IscU_likecoord: 27..141
e-value: 7.26518E-47
score: 146.626
IPR011339ISC system FeS cluster assembly, IscU scaffoldTIGRFAMTIGR01999TIGR01999coord: 27..149
e-value: 1.7E-67
score: 223.2
NoneNo IPR availableGENE3D3.90.1010.10coord: 26..157
e-value: 3.9E-50
score: 171.8
NoneNo IPR availablePANTHERPTHR10093:SF16IRON-SULFUR CLUSTER ASSEMBLY ENZYME ISCU, MITOCHONDRIALcoord: 10..150
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 26..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:839004..839561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6987.t1Gvermi6987.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 839004..839561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6987.t1 ID=Gvermi6987.t1|Name=Gvermi6987.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=159bp
MIRTTVTALNRAHGSALTNLAKRSRCYHDKVIDHYENPRNVGSLNKEDKN
VGTGLVGAPACGDVMKLQIRVNDDGEIVESAFKTFGCGSAIASSSLATEW
VKGRNVDDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKDKQG
GAQSAPSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002871NIF_FeS_clus_asmbl_NifU_N
IPR011339ISC_FeS_clus_asmbl_IscU