Gvermi6931.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6931.t1
Unique NameGvermi6931.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length212
Homology
BLAST of Gvermi6931.t1 vs. uniprot
Match: A0A2V3IWD8_9FLOR (5'-deoxynucleotidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWD8_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 1.880e-85
Identity = 135/188 (71.81%), Postives = 154/188 (81.91%), Query Frame = 0
Query:   13 TQPMSSADGTTSTLDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHP-NRDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQLRHDRRN 199
            T P SS    ++TLDFLRLIG LKTTKRTGWVR+ V LPESI+DHMYRM+LIA T+P P NRD+LIRMALVHDLAECIVGDITP DNVSKQQK ++EDDAMRHIRD+VL  S   LE+Y+LW EYE G + DA LVK+IDKFEM+LQADEYER Q VHLQQFFDST+  F T  + ALDKQLR  R++
Sbjct:    4 TSPTSSPS-VSNTLDFLRLIGSLKTTKRTGWVRNQVSLPESISDHMYRMSLIALTLPTPTNRDKLIRMALVHDLAECIVGDITPHDNVSKQQKRKLEDDAMRHIRDNVLNGSDIGLELYRLWAEYELGQTDDAKLVKEIDKFEMILQADEYERHQTVHLQQFFDSTQDCFHTPFLTALDKQLRTTRQH 190          
BLAST of Gvermi6931.t1 vs. uniprot
Match: S0F3X1_CHOCR (5'-deoxynucleotidase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3X1_CHOCR)

HSP 1 Score: 191 bits (485), Expect = 2.990e-58
Identity = 94/175 (53.71%), Postives = 123/175 (70.29%), Query Frame = 0
Query:   26 LDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTI---PHPNRDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQLRHDR 197
            L F R +G+LKT KRTGWV+  VH PES++DHMYRMAL+A  +       RDRLI+MALVHDLAE  VGDI P D VSK++K   E+ AM H+RD  L +S    E+Y LW EY+ G + DA LVK++DK EM++QADEYE  Q   L++FF+STR +F ++V+  +D+ LR  R
Sbjct:   14 LSFFRFVGKLKTIKRTGWVKRGVHDPESVSDHMYRMALMAMAVGGNDSARRDRLIKMALVHDLAESEVGDIAPGDGVSKEEKFSREEAAMHHLRDDALSQSTFGKELYDLWLEYDQGKTEDARLVKELDKMEMIVQADEYETVQGKDLEEFFESTRGVFHSNVMQDIDRALRSQR 188          
BLAST of Gvermi6931.t1 vs. uniprot
Match: A0A6A7GDJ1_9CRUS (5'-deoxynucleotidase HDDC2 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GDJ1_9CRUS)

HSP 1 Score: 189 bits (481), Expect = 8.270e-58
Identity = 103/181 (56.91%), Postives = 129/181 (71.27%), Query Frame = 0
Query:   23 TSTLDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIP-HPNRDRLIRMALVHDLAECIVGDITPQDN--VSKQQKHQMEDDAMRHIRDHVLRRSPPA-LEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQ-NVHLQQFFDSTRHLFRTDVVAALDKQLRHDRR 198
            T  LDF  L+G+LKTTKRTGW+   V LPESIADHMYRMALI+F +P H +  R+ RMALVHDL E IVGDITP+    VSK+ K ++E DAM HIRD +L+ SP A  E++ LW EYE G S  A + KD+DKFEM+LQA EYE++Q N+ L  FFDS R  F +D V +L  +L + R+
Sbjct:    2 TDVLDFCLLLGKLKTTKRTGWIDHEVRLPESIADHMYRMALISFVLPRHVDTSRVCRMALVHDLGESIVGDITPESKSGVSKEDKFKLERDAMIHIRDVLLKDSPEAGQEIFSLWMEYEAGESESARICKDLDKFEMILQAHEYEQSQKNLDLSDFFDSVRGKFTSDCVKSLVSELNNRRK 182          
BLAST of Gvermi6931.t1 vs. uniprot
Match: A0A397VRZ7_9GLOM (5'-deoxynucleotidase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VRZ7_9GLOM)

HSP 1 Score: 185 bits (470), Expect = 4.220e-56
Identity = 90/184 (48.91%), Postives = 133/184 (72.28%), Query Frame = 0
Query:   17 SSADGTTSTLDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHP--NRDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQLRHDRR 198
            +S+   T  L+F  L  +LKTTKRTGW+ SNV  PESI+DHMYRM++++ ++  P  NRD+ ++M++VHDLAE IVGDITP D +SK++K + E +A+RH+ + +L  S  + E+Y LW+EYED  + +A  V+DIDKFEM+LQA EYE+AQN +L+ FF+ST+  F    V +  ++L  +R+
Sbjct:    7 TSSSNVTKLLEFFHLCEKLKTTKRTGWIYSNVENPESISDHMYRMSILSLSVNDPTLNRDKCVKMSIVHDLAEAIVGDITPTDGISKEEKKRRESEALRHMCNDLLGNSQQSQEIYALWQEYEDATTKEAKFVRDIDKFEMILQAYEYEQAQNKNLEDFFESTKGRFTHPEVKSWVEELYKNRK 190          
BLAST of Gvermi6931.t1 vs. uniprot
Match: A0A5D6XYG0_9STRA (5'-deoxynucleotidase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYG0_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.250e-54
Identity = 92/172 (53.49%), Postives = 121/172 (70.35%), Query Frame = 0
Query:   26 LDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHPN----RDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQL 193
            ++FLR+ GRLK  KRTGWV +NV LPES+ADHMYRM +    +   N    R + I+MA+VHDLAE +VGDITP D V+++ KH+ME DA+ HI   VL  S  A+E+ +LW EYE GA+ +A +VKD DKFEM+LQADEYE+A+   L  FF ST+  FRT +V +   +L
Sbjct:   13 VEFLRICGRLKRLKRTGWVNNNVALPESVADHMYRMGMCCMLLDESNAAVDRSKCIKMAIVHDLAESLVGDITPHDGVAEEDKHRMEKDALEHICG-VLGESQAAVEIRELWHEYEAGATEEAKMVKDFDKFEMILQADEYEQAEETALDDFFRSTQGKFRTPLVQSWVAEL 183          
BLAST of Gvermi6931.t1 vs. uniprot
Match: G4ZR71_PHYSP (5'-deoxynucleotidase n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZR71_PHYSP)

HSP 1 Score: 181 bits (460), Expect = 1.380e-54
Identity = 92/174 (52.87%), Postives = 123/174 (70.69%), Query Frame = 0
Query:   24 STLDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHPN----RDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQL 193
            S ++FLRL GRLKT KRTGWV + V LPES+ADHMYRM++    +   N    R + I+MA+VHDLAE +VGDITP D V+++ KH+ME +A+  I +  L  +P A E+  LW EYE G++ +A +VKD DKFEM+LQAD+YERA NV L  FF ST+  FRT +V +  ++L
Sbjct:    9 SAIEFLRLCGRLKTLKRTGWVNNKVALPESVADHMYRMSMCCMLLDDANETVNRPKCIKMAIVHDLAESLVGDITPHDGVAEEDKHRMEKEALDEICN-TLGDTPSAAEIRSLWNEYEAGSTEEAKIVKDFDKFEMILQADDYERAHNVPLDDFFQSTKGKFRTPLVQSWVEEL 181          
BLAST of Gvermi6931.t1 vs. uniprot
Match: H3GV42_PHYRM (5'-deoxynucleotidase n=26 Tax=Phytophthora TaxID=4783 RepID=H3GV42_PHYRM)

HSP 1 Score: 181 bits (460), Expect = 1.610e-54
Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 0
Query:   24 STLDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHPN----RDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQL 193
            S ++FLRL GRLKT KRTGWV + V LPES+ADHMYRM +    +   N    R + I+MA+VHDLAE +VGDITP D V+++ KH+ME +A+  I    L  +P A E+  LW EYE G++ +A +VKD DKFEM+LQAD+YERAQN+ L  FF ST+  FRT +V +   +L
Sbjct:   11 SAIEFLRLCGRLKTLKRTGWVNNKVALPESVADHMYRMGMCCMLLDDANETVNRSKCIKMAIVHDLAESLVGDITPHDGVAEEDKHRMEKEALDEICG-TLGDTPSAAEIRSLWNEYEAGSTEEAKMVKDFDKFEMILQADDYERAQNIPLDDFFQSTKGKFRTPLVQSWVAEL 183          
BLAST of Gvermi6931.t1 vs. uniprot
Match: A0A0L0FZA6_9EUKA (5'-deoxynucleotidase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FZA6_9EUKA)

HSP 1 Score: 181 bits (459), Expect = 1.620e-54
Identity = 95/177 (53.67%), Postives = 124/177 (70.06%), Query Frame = 0
Query:   26 LDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHPNRD--RLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVH--LQQFFDSTRHLFRTDVVAALDKQLRHDRR 198
            LDF+ L G LK TKRTGWV +NV LPESI+DHM+RM L+AF       D  R +++A+VHDLAE IVGDITP D VSK+ K +MEDDAM+ I    L+ S    E+Y+LWREYED ++ +A+ VKD+DKFEM+ QA EYE+A+N    LQ FFD T  +F T  V +  ++L+  R+
Sbjct:   10 LDFVLLCGELKRTKRTGWVNNNVTLPESISDHMHRMGLLAFLCDDKTLDKTRCVKIAMVHDLAEAIVGDITPYDGVSKEAKEKMEDDAMKSIWTETLQDSEAGKELYELWREYEDASTPEALFVKDLDKFEMICQAFEYEKAENRPGGLQTFFDGTEGVFSTPQVKSWVEELKSRRK 186          
BLAST of Gvermi6931.t1 vs. uniprot
Match: A0A0P1AY03_PLAHL (5'-deoxynucleotidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY03_PLAHL)

HSP 1 Score: 181 bits (459), Expect = 1.950e-54
Identity = 90/182 (49.45%), Postives = 126/182 (69.23%), Query Frame = 0
Query:   16 MSSADGTTSTLDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHPN----RDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQL 193
            M++    T  ++FLRL G LKT KRTGWV + V +PES+ADHMYRM++    +   N    R + I+MA+VHDLAE ++GDITP D ++++ KH+ME +A+ +I    L  +P ALE+ +LW EYE G + +A +VKD DKFEM+LQADEYE+AQN+ L  FF ST+  FRT +V +   +L
Sbjct:    1 MATKSKATCAIEFLRLCGSLKTLKRTGWVNNKVAMPESVADHMYRMSMCCMLLEDANEALNRSKCIKMAIVHDLAESLIGDITPHDGIAEEVKHRMEKEALDNICS-TLGDTPSALEIRELWNEYEAGLTEEAKMVKDFDKFEMILQADEYEKAQNISLDDFFQSTKGKFRTPLVQSWVSEL 181          
BLAST of Gvermi6931.t1 vs. uniprot
Match: A0A3R7K1B0_9STRA (5'-deoxynucleotidase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K1B0_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.350e-54
Identity = 91/172 (52.91%), Postives = 123/172 (71.51%), Query Frame = 0
Query:   26 LDFLRLIGRLKTTKRTGWVRSNVHLPESIADHMYRMALIAFTIPHPN----RDRLIRMALVHDLAECIVGDITPQDNVSKQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDIDKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQL 193
            ++FLRL GRLKT KRTGWV + V LPES+ADHMYRM++    +   N    R + I+MA+VHDLAE +VGDITP D V+++ KH+ME +A+  I    L  +P A E+ +LW EYE G++ +A +VKD DKFEM+LQAD+YERAQN+ L  FF ST+  FRT +V +  ++L
Sbjct:   13 IEFLRLCGRLKTLKRTGWVNNKVALPESVADHMYRMSMCCMLLDDDNKAVNRSKCIKMAIVHDLAESLVGDITPHDGVAEEDKHRMEKEALDEICS-KLGDTPSAAEIRELWAEYEAGSTEEAKMVKDFDKFEMILQADDYERAQNIPLGDFFQSTKDKFRTPLVQSWVEEL 183          
The following BLAST results are available for this feature:
BLAST of Gvermi6931.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWD8_9FLOR1.880e-8571.815'-deoxynucleotidase n=1 Tax=Gracilariopsis chorda... [more]
S0F3X1_CHOCR2.990e-5853.715'-deoxynucleotidase n=1 Tax=Chondrus crispus TaxI... [more]
A0A6A7GDJ1_9CRUS8.270e-5856.915'-deoxynucleotidase HDDC2 (Fragment) n=1 Tax=Hiro... [more]
A0A397VRZ7_9GLOM4.220e-5648.915'-deoxynucleotidase n=2 Tax=Gigaspora TaxID=4873 ... [more]
A0A5D6XYG0_9STRA1.250e-5453.495'-deoxynucleotidase n=1 Tax=Pythium brassicum Tax... [more]
G4ZR71_PHYSP1.380e-5452.875'-deoxynucleotidase n=2 Tax=Phytophthora TaxID=47... [more]
H3GV42_PHYRM1.610e-5452.875'-deoxynucleotidase n=26 Tax=Phytophthora TaxID=4... [more]
A0A0L0FZA6_9EUKA1.620e-5453.675'-deoxynucleotidase n=1 Tax=Sphaeroforma arctica ... [more]
A0A0P1AY03_PLAHL1.950e-5449.455'-deoxynucleotidase n=1 Tax=Plasmopara halstedii ... [more]
A0A3R7K1B0_9STRA2.350e-5452.915'-deoxynucleotidase n=3 Tax=Phytophthora kernovia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003607HD/PDEase domainSMARTSM00471hd_13coord: 50..165
e-value: 2.9E-6
score: 36.8
IPR006674HD domainPFAMPF13023HD_3coord: 32..179
e-value: 1.9E-41
score: 141.8
NoneNo IPR availableGENE3D1.10.3210.10Hypothetical protein af1432coord: 13..206
e-value: 6.3E-63
score: 214.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 19..186
IPR0393565'-deoxynucleotidase YfbR/HDDC2PANTHERPTHR11845UNCHARACTERIZEDcoord: 15..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:606247..606882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6931.t1Gvermi6931.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 606247..606882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6931.t1 ID=Gvermi6931.t1|Name=Gvermi6931.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=212bp
MSVSPHSPSPAHTQPMSSADGTTSTLDFLRLIGRLKTTKRTGWVRSNVHL
PESIADHMYRMALIAFTIPHPNRDRLIRMALVHDLAECIVGDITPQDNVS
KQQKHQMEDDAMRHIRDHVLRRSPPALEMYQLWREYEDGASHDAMLVKDI
DKFEMVLQADEYERAQNVHLQQFFDSTRHLFRTDVVAALDKQLRHDRRNH
AAPHRQPPPDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003607HD/PDEase_dom
IPR006674HD_domain
IPR039356YfbR/HDDC2