Gvermi7053.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7053.t1
Unique NameGvermi7053.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length220
Homology
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BLAST of Gvermi7053.t1 vs. uniprot
Match: A0A2V3ID46_9FLOR (Oxygen-dependent coproporphyrinogen-III oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID46_9FLOR)

HSP 1 Score: 280 bits (716), Expect = 4.000e-91
Identity = 138/215 (64.19%), Postives = 168/215 (78.14%), Query Frame = 0 
Query:    3 KESVGISLNLAPRDEALPRLRADAHYFQIGAGSVAWWFAGAADLSVGRAASPRRFAAVVAPFLRTWQRLCARHRLRPRAQRTAFLHACLAADRPCALHRLDRDNAFNFIADVLDSLLPAYLPLLAPAPADHAFADWDGFQLSHPAHPDHGRFGSETVDTFCISGGADCESTTLRANPLGSWRFSLAPSPLTTAGKLYRTLRSDSRSARSSLLYVD 217
            KESVG+SLNL PRD +LP LRADAHYFQIGAG VAWWFAG ADLSVG  ASP +F  +VA FL TW+RL +RHR+  RAQ++AFL AC++ D    + R+DR+ +FNFI++V+D+LLP+YLPLL     D AF DW G ++   A  + G FG+ETV+TFCISGGA CESTTLRANPLGSWRFSLAPS +T AG++Y  LRSD R AR SL+Y+D
Sbjct:  133 KESVGVSLNLVPRDASLPCLRADAHYFQIGAGRVAWWFAGTADLSVGSQASPTKFENLVASFLNTWERLRSRHRVEGRAQKSAFLDACMSIDDDVPVERVDRETSFNFISEVVDTLLPSYLPLLEGRGHDIAFEDWKGHEVGE-ALTETGAFGNETVETFCISGGASCESTTLRANPLGSWRFSLAPSTMTAAGRVYDALRSDKRGARPSLVYID 346
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BLAST of Gvermi7053.t1 vs. uniprot
Match: R7Q732_CHOCR (Coproporphyrinogen oxidase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q732_CHOCR)

HSP 1 Score: 199 bits (505), Expect = 3.400e-59
Identity = 109/228 (47.81%), Postives = 136/228 (59.65%), Query Frame = 0 
Query:    3 KESVGISLNLAPRDEALPRLRADAHYFQIGAGSVAWWFAGAADLSVGRAASPRRFAAVVAPFLRTWQRLCARHRLRPRAQRTAFLHACLAAD---RPCALHRLDRDNAFNFIADVLDSLLPAYLPLLAPAPADHAFADWDGFQLSHPAHPDHG-----------RFGSETVDTFCISGGADCESTTLRANPLGSWRFSLAPSPLTTAGKLYRTLRSDSRSARSSLLYV 216
            K++VG+S+ L+PRD + P LRADAHYFQIG G+V+WWF+G AD+S+G  A P  FA  + PFL TW +L  RHR  P      FL  CL          +  LDR +AF FI +V+D+LLPAYLPLL        F      ++ H   P  G           RFG E +DTF ISGGA CES T+R +PLGSWRFSLAPS  T AGK Y TLR+D  +    L ++
Sbjct:  132 KDAVGVSVKLSPRDPSAPALRADAHYFQIGGGTVSWWFSGTADISMGPEADPDTFAENLGPFLGTWDKLRMRHRAPPGRLTRNFLQDCLRVSGEGEAAPIGGLDRMSAFGFITEVVDALLPAYLPLLRARKRGSRFES----EMLHDWEPVWGGLGLGGTDVERRFGKEEIDTFGISGGATCESVTVRGSPLGSWRFSLAPSMFTAAGKTYATLRNDHGNINGPLTHI 355
The following BLAST results are available for this feature:
BLAST of Gvermi7053.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ID46_9FLOR4.000e-9164.19Oxygen-dependent coproporphyrinogen-III oxidase n=... [more]
R7Q732_CHOCR3.400e-5947.81Coproporphyrinogen oxidase n=1 Tax=Chondrus crispu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036406Oxygen-dependent coproporphyrinogen III oxidase superfamilyGENE3D3.40.1500.10Coproporphyrinogen III oxidase, aerobiccoord: 1..207
e-value: 1.6E-14
score: 55.2
IPR036406Oxygen-dependent coproporphyrinogen III oxidase superfamilySUPERFAMILY102886Coproporphyrinogen III oxidasecoord: 5..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1315980..1316639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7053.t1Gvermi7053.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1315980..1316639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7053.t1 ID=Gvermi7053.t1|Name=Gvermi7053.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=220bp
LRKESVGISLNLAPRDEALPRLRADAHYFQIGAGSVAWWFAGAADLSVGR
AASPRRFAAVVAPFLRTWQRLCARHRLRPRAQRTAFLHACLAADRPCALH
RLDRDNAFNFIADVLDSLLPAYLPLLAPAPADHAFADWDGFQLSHPAHPD
HGRFGSETVDTFCISGGADCESTTLRANPLGSWRFSLAPSPLTTAGKLYR
TLRSDSRSARSSLLYVDFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036406Coprogen_oxidase_aer_sf