Gvermi7066.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7066.t1
Unique NameGvermi7066.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length225
Homology
BLAST of Gvermi7066.t1 vs. uniprot
Match: A0A2V3INI4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI4_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 5.480e-43
Identity = 86/222 (38.74%), Postives = 126/222 (56.76%), Query Frame = 0
Query:    7 ICLSLLCSLIMGDENESSRRN-----VMTGMYVSKIPFRTDKLHTESCLLLNGKNIIDEEFSFDFEAADVLFACSEMRGRHVTHFSGKISLKRSEIVCEKTPLISYDDGENNLNLAAFQLPFVCVEEICVFYKSVRNRVLLSAAVSLSEVSRLRRQKSIKIPFLETEVLYDFDGHMVKQFAKNQARAFIKNVTGSIDLRALSYLGSTKGQCQFP-KLSCTCR 222
            I ++L+  L++       RR      V+ G++  +IP  T     E C +++ KN+I EEF   FE+  +L  C+  R   +THF+G  SL+    VC++ P+ISYD      +        VC +E+CVF  +  N+V LSAA+S  E   L  + +I IPFL T+V Y F+G + +QFA    +AF K+VTGSIDLRA+ +LG+  G C FP   SC+CR
Sbjct:    3 ISIALILFLLVTTSAARGRRRRSFPPVLRGVHYPRIPIDTIYTQQERCAIVDAKNVIKEEFPNSFESYSILTTCASNRNGLITHFAGNFSLESFSFVCDEEPVISYDKNAEPPSFPVTGKDVVCGDELCVFVFATGNQVFLSAAISPEEARILPSKPAISIPFLPTKVFYRFNGKL-RQFAGRMVKAFEKDVTGSIDLRAMVFLGARSGSCPFPLSPSCSCR 223          
BLAST of Gvermi7066.t1 vs. uniprot
Match: A0A2V3INK4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK4_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 7.330e-33
Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 0
Query:   31 GMYVSKIPFRTDKLHTESCLLLNGKNIIDEEFSFDFEAADVLFACSEMRGRHVTHFSGKISLKRSEIVCEKTPLISYD-DGENNLNLAAFQLPFVCVEEICVFYKSVRNRVLLSAAVSLSEVSRLRRQKSIKIPFLETEVLYDFDGHMVKQFAKNQARAFIKNVTGSIDLRALSYLGSTKGQCQFPKL-SCTCR 222
            G ++ +IP RT +   E C ++N    +   FS  FE   VL  C+      +THF+G  SL+ S +VC+++PLISY+  G  N  L     P +C  + CV   S  + V LSAA+   EV  LR Q SI IPF+ET+V ++FDG ++++FA N   A+ K VT S+ LR+ + LG+    C FP+  SC CR
Sbjct:   30 GNFLPRIPIRTQRTRMEPCSIVNSHPAVGS-FSESFETFSVLTTCATNNDGFITHFAGNYSLESSALVCDESPLISYNYSGSTNRTLD--NNPALCGPDTCVVVFSESDTVSLSAAIRKDEVETLRNQ-SISIPFIETKVFFEFDG-LLEEFAMNLLEAYSKAVTDSLVLRSKTLLGAKSDLCPFPERNSCVCR 218          
The following BLAST results are available for this feature:
BLAST of Gvermi7066.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3INI4_9FLOR5.480e-4338.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3INK4_9FLOR7.330e-3339.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1431793..1432467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7066.t1Gvermi7066.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1431793..1432467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7066.t1 ID=Gvermi7066.t1|Name=Gvermi7066.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=225bp
MKYFIVICLSLLCSLIMGDENESSRRNVMTGMYVSKIPFRTDKLHTESCL
LLNGKNIIDEEFSFDFEAADVLFACSEMRGRHVTHFSGKISLKRSEIVCE
KTPLISYDDGENNLNLAAFQLPFVCVEEICVFYKSVRNRVLLSAAVSLSE
VSRLRRQKSIKIPFLETEVLYDFDGHMVKQFAKNQARAFIKNVTGSIDLR
ALSYLGSTKGQCQFPKLSCTCRRN*
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