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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 3218.PP1S58_143V6.1 |
| PFAMs | C2,PLD_C,PLDc |
| Max annot lvl | 35493|Streptophyta |
| KEGG rclass | RC00017,RC00425 |
| KEGG ko | ko:K01115 |
| KEGG Reaction | R01310,R02051,R07385 |
| KEGG Pathway | ko00564,ko00565,ko01100,ko01110,ko04014,ko04024,ko04071,ko04072,ko04144,ko04666,ko04724,ko04912,ko05231,map00564,map00565,map01100,map01110,map04014,map04024,map04071,map04072,map04144,map04666,map04724,map04912,map05231 |
| Evalue | 5.16e-166 |
| EggNOG OGs | COG1502@1|root,KOG1329@2759|Eukaryota,37J5H@33090|Viridiplantae,3GGBM@35493|Streptophyta |
| EC | 3.1.4.4 |
| Description | Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond |
| COG category | I |
| BRITE | ko00000,ko00001,ko01000,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi7034.t1 ID=Gvermi7034.t1|Name=Gvermi7034.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=830bp MSQNPSESQPGIGAFLHGRLSISVHEARNIEGKGASRFFEKLERAVTSSI DGVDPYVSVKMGYNKIMQTPVIHNTSSPVWNSTIDLDVCHDLTTLEFRVK AAKRTGAFAILSKVKHLSMASIPAAQIQYERSVSDWIPLGPYVREITEDS EFSNNDEKDAPEEPKQSSNSYFGEIRISVTYTPITDLDDYESVAMPNMYF PKRDGINVTFYQDADSIPGFLPVIPFRPEYRHARCWSEMARAIMSATELI YITGWAVWQDLVMVRTNYDEDEWNGLTLGEMLKQKANEGVTVCVMVWDEY ASNQLYQGIMGTHDEEIVPYFANTRVNCIKVGRQNPKDGPLADMNDAIMF THHQKTVIISRMDSNIGKNRLEAWVGGLDLTDGRYDNQNHSLFRTLDSLH KPPDFWQACALGVTAVSGPREPWHDIHSHVTGTAAWDVLTNFEGRWARQA PDHMKNSLHQRSEDTFVLAWEEVQIQDGSFSVQVLRSINEASTQLSRDRP GLMSRRNALSDHSIHRAYIHQIRSAKHFIYIENQYFLGSSHLWNSNQRGG FAAHLVPIEVAEKICAKIRSGQRFAVYVNIPLYPEGPPDSGAVQEILSHQ RKTINLIRSRIKKTIDEVGSDTVVEDWFNVFCLVNRESTEAGKGNGGTSE LEVKLSSSRRFMIYIHSKFAIFDDTTAIIGSANINGRSLDGSRDTEIAIA AWQPEYLATGSNGYMPKDDEGSLPKGDVAAFRASVWAEHLGDYQDVLDDP SSLECVQYVREKAGTNWEHFASDDPESVCDMPYGHLALYPYKYDDDTGEV IAGNDTFPDFPTALIKGKASPALPNMLTG* back to topspliced messenger RNA >Gvermi7034.t1 ID=Gvermi7034.t1|Name=Gvermi7034.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2490bp|location=Sequence derived from alignment at ScGOVlb_24229:1044390..1046879- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGCAGAACCCCTCTGAATCACAGCCCGGCATCGGCGCCTTTCTTCA TGGGAGGCTTTCAATTTCTGTCCATGAGGCCCGCAACATTGAAGGCAAAG GCGCTTCGCGATTCTTCGAAAAGCTTGAGCGAGCCGTCACTTCCTCCATC GATGGCGTCGATCCGTATGTATCTGTAAAGATGGGATACAATAAGATCAT GCAGACTCCTGTTATTCACAATACCTCATCTCCTGTCTGGAACTCCACTA TTGATCTGGATGTTTGCCATGACTTAACCACTCTGGAATTCCGCGTCAAG GCGGCAAAACGAACCGGGGCGTTTGCCATTCTGTCTAAAGTGAAACATCT CAGTATGGCCTCCATACCGGCTGCTCAAATCCAGTATGAAAGATCTGTTT CCGATTGGATTCCGCTAGGGCCTTATGTCAGAGAAATCACGGAAGACTCA GAGTTTTCGAACAACGACGAGAAAGATGCCCCAGAGGAGCCAAAGCAATC GTCCAATTCTTACTTTGGAGAGATTAGAATATCAGTCACTTACACTCCGA TCACAGACCTGGACGACTATGAATCTGTTGCAATGCCAAACATGTACTTT CCCAAACGTGACGGCATAAATGTAACATTTTATCAGGACGCCGACAGTAT TCCTGGTTTTCTTCCAGTTATTCCGTTCCGCCCAGAGTACAGACATGCCC GATGCTGGTCAGAGATGGCACGCGCCATCATGTCTGCTACAGAACTCATC TACATCACCGGCTGGGCCGTTTGGCAAGATCTTGTAATGGTGCGTACGAA TTACGATGAAGACGAATGGAATGGACTAACCCTCGGAGAAATGCTCAAAC AAAAAGCCAATGAAGGCGTTACGGTTTGTGTCATGGTTTGGGACGAATAC GCCAGCAATCAGCTTTATCAGGGGATCATGGGCACACACGACGAGGAGAT TGTGCCGTATTTTGCCAACACAAGAGTCAATTGCATCAAAGTAGGCCGAC AAAATCCAAAGGATGGTCCTCTTGCCGATATGAATGATGCCATCATGTTC ACGCACCATCAGAAGACCGTCATTATTTCCCGCATGGATTCCAACATTGG TAAGAATCGATTGGAGGCTTGGGTTGGCGGACTTGACCTCACCGACGGTC GCTATGACAATCAAAACCACAGCCTATTTCGGACACTTGATTCTCTTCAT AAACCGCCAGACTTCTGGCAGGCTTGTGCTCTAGGCGTCACGGCGGTATC AGGTCCGAGAGAACCATGGCACGACATACATTCCCATGTAACCGGAACGG CAGCATGGGATGTATTGACAAACTTTGAAGGTCGATGGGCGCGTCAGGCA CCGGATCACATGAAGAATTCACTCCATCAACGATCAGAAGACACTTTTGT GTTGGCCTGGGAAGAAGTTCAGATTCAGGATGGAAGTTTCAGTGTTCAAG TTTTGCGCAGTATCAATGAGGCATCCACGCAACTTAGTAGGGATCGACCA GGATTAATGTCTCGAAGAAATGCCTTATCGGATCACAGCATCCATCGCGC ATACATTCACCAAATTCGCTCCGCAAAGCATTTCATTTACATCGAAAATC AGTACTTTCTCGGTTCGAGCCATTTATGGAATTCAAACCAAAGAGGCGGG TTTGCTGCGCATCTAGTTCCCATTGAAGTAGCTGAGAAGATTTGTGCCAA AATTCGAAGCGGTCAGCGATTTGCAGTGTACGTGAACATCCCGCTCTACC CTGAAGGCCCTCCAGATTCTGGGGCTGTGCAAGAAATTCTTTCTCATCAA CGCAAAACCATAAATCTCATTAGATCGAGAATCAAGAAGACTATTGACGA AGTCGGTAGCGATACTGTTGTTGAAGATTGGTTCAACGTGTTTTGTCTTG TGAATCGTGAATCCACTGAGGCTGGAAAAGGCAATGGCGGAACTAGCGAA CTTGAAGTGAAGCTTTCGAGTAGTCGAAGGTTCATGATTTACATTCACAG CAAATTTGCCATCTTTGACGATACTACGGCTATTATCGGCTCTGCCAACA TTAACGGCCGATCGTTGGATGGCTCACGGGATACTGAAATTGCAATTGCA GCTTGGCAGCCTGAATATCTTGCCACTGGGAGCAATGGATATATGCCAAA GGATGATGAGGGGTCACTTCCAAAGGGTGATGTGGCAGCATTCCGCGCCA GTGTATGGGCTGAACATCTTGGAGATTATCAGGATGTGCTAGACGACCCT TCTTCTCTAGAATGTGTTCAATACGTTCGCGAGAAGGCTGGTACAAACTG GGAACATTTTGCTTCCGACGATCCGGAGTCTGTGTGCGACATGCCATACG GTCACTTGGCTCTGTATCCGTACAAGTATGATGATGACACCGGTGAAGTT ATTGCTGGCAATGACACGTTCCCCGACTTCCCCACCGCGCTGATTAAGGG CAAAGCTTCGCCCGCTCTTCCAAACATGCTCACCGGCTGA back to topprotein sequence of Gvermi7034.t1 >Gvermi7034.t1 ID=Gvermi7034.t1|Name=Gvermi7034.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=830bp
MSQNPSESQPGIGAFLHGRLSISVHEARNIEGKGASRFFEKLERAVTSSI DGVDPYVSVKMGYNKIMQTPVIHNTSSPVWNSTIDLDVCHDLTTLEFRVK AAKRTGAFAILSKVKHLSMASIPAAQIQYERSVSDWIPLGPYVREITEDS EFSNNDEKDAPEEPKQSSNSYFGEIRISVTYTPITDLDDYESVAMPNMYF PKRDGINVTFYQDADSIPGFLPVIPFRPEYRHARCWSEMARAIMSATELI YITGWAVWQDLVMVRTNYDEDEWNGLTLGEMLKQKANEGVTVCVMVWDEY ASNQLYQGIMGTHDEEIVPYFANTRVNCIKVGRQNPKDGPLADMNDAIMF THHQKTVIISRMDSNIGKNRLEAWVGGLDLTDGRYDNQNHSLFRTLDSLH KPPDFWQACALGVTAVSGPREPWHDIHSHVTGTAAWDVLTNFEGRWARQA PDHMKNSLHQRSEDTFVLAWEEVQIQDGSFSVQVLRSINEASTQLSRDRP GLMSRRNALSDHSIHRAYIHQIRSAKHFIYIENQYFLGSSHLWNSNQRGG FAAHLVPIEVAEKICAKIRSGQRFAVYVNIPLYPEGPPDSGAVQEILSHQ RKTINLIRSRIKKTIDEVGSDTVVEDWFNVFCLVNRESTEAGKGNGGTSE LEVKLSSSRRFMIYIHSKFAIFDDTTAIIGSANINGRSLDGSRDTEIAIA AWQPEYLATGSNGYMPKDDEGSLPKGDVAAFRASVWAEHLGDYQDVLDDP SSLECVQYVREKAGTNWEHFASDDPESVCDMPYGHLALYPYKYDDDTGEV IAGNDTFPDFPTALIKGKASPALPNMLTG* back to topmRNA from alignment at ScGOVlb_24229:1044390..1046879- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi7034.t1 ID=Gvermi7034.t1|Name=Gvermi7034.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2490bp|location=Sequence derived from alignment at ScGOVlb_24229:1044390..1046879- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCGCAGAACCCCTCTGAATCACAGCCCGGCATCGGCGCCTTTCTTCA
TGGGAGGCTTTCAATTTCTGTCCATGAGGCCCGCAACATTGAAGGCAAAG
GCGCTTCGCGATTCTTCGAAAAGCTTGAGCGAGCCGTCACTTCCTCCATC
GATGGCGTCGATCCGTATGTATCTGTAAAGATGGGATACAATAAGATCAT
GCAGACTCCTGTTATTCACAATACCTCATCTCCTGTCTGGAACTCCACTA
TTGATCTGGATGTTTGCCATGACTTAACCACTCTGGAATTCCGCGTCAAG
GCGGCAAAACGAACCGGGGCGTTTGCCATTCTGTCTAAAGTGAAACATCT
CAGTATGGCCTCCATACCGGCTGCTCAAATCCAGTATGAAAGATCTGTTT
CCGATTGGATTCCGCTAGGGCCTTATGTCAGAGAAATCACGGAAGACTCA
GAGTTTTCGAACAACGACGAGAAAGATGCCCCAGAGGAGCCAAAGCAATC
GTCCAATTCTTACTTTGGAGAGATTAGAATATCAGTCACTTACACTCCGA
TCACAGACCTGGACGACTATGAATCTGTTGCAATGCCAAACATGTACTTT
CCCAAACGTGACGGCATAAATGTAACATTTTATCAGGACGCCGACAGTAT
TCCTGGTTTTCTTCCAGTTATTCCGTTCCGCCCAGAGTACAGACATGCCC
GATGCTGGTCAGAGATGGCACGCGCCATCATGTCTGCTACAGAACTCATC
TACATCACCGGCTGGGCCGTTTGGCAAGATCTTGTAATGGTGCGTACGAA
TTACGATGAAGACGAATGGAATGGACTAACCCTCGGAGAAATGCTCAAAC
AAAAAGCCAATGAAGGCGTTACGGTTTGTGTCATGGTTTGGGACGAATAC
GCCAGCAATCAGCTTTATCAGGGGATCATGGGCACACACGACGAGGAGAT
TGTGCCGTATTTTGCCAACACAAGAGTCAATTGCATCAAAGTAGGCCGAC
AAAATCCAAAGGATGGTCCTCTTGCCGATATGAATGATGCCATCATGTTC
ACGCACCATCAGAAGACCGTCATTATTTCCCGCATGGATTCCAACATTGG
TAAGAATCGATTGGAGGCTTGGGTTGGCGGACTTGACCTCACCGACGGTC
GCTATGACAATCAAAACCACAGCCTATTTCGGACACTTGATTCTCTTCAT
AAACCGCCAGACTTCTGGCAGGCTTGTGCTCTAGGCGTCACGGCGGTATC
AGGTCCGAGAGAACCATGGCACGACATACATTCCCATGTAACCGGAACGG
CAGCATGGGATGTATTGACAAACTTTGAAGGTCGATGGGCGCGTCAGGCA
CCGGATCACATGAAGAATTCACTCCATCAACGATCAGAAGACACTTTTGT
GTTGGCCTGGGAAGAAGTTCAGATTCAGGATGGAAGTTTCAGTGTTCAAG
TTTTGCGCAGTATCAATGAGGCATCCACGCAACTTAGTAGGGATCGACCA
GGATTAATGTCTCGAAGAAATGCCTTATCGGATCACAGCATCCATCGCGC
ATACATTCACCAAATTCGCTCCGCAAAGCATTTCATTTACATCGAAAATC
AGTACTTTCTCGGTTCGAGCCATTTATGGAATTCAAACCAAAGAGGCGGG
TTTGCTGCGCATCTAGTTCCCATTGAAGTAGCTGAGAAGATTTGTGCCAA
AATTCGAAGCGGTCAGCGATTTGCAGTGTACGTGAACATCCCGCTCTACC
CTGAAGGCCCTCCAGATTCTGGGGCTGTGCAAGAAATTCTTTCTCATCAA
CGCAAAACCATAAATCTCATTAGATCGAGAATCAAGAAGACTATTGACGA
AGTCGGTAGCGATACTGTTGTTGAAGATTGGTTCAACGTGTTTTGTCTTG
TGAATCGTGAATCCACTGAGGCTGGAAAAGGCAATGGCGGAACTAGCGAA
CTTGAAGTGAAGCTTTCGAGTAGTCGAAGGTTCATGATTTACATTCACAG
CAAATTTGCCATCTTTGACGATACTACGGCTATTATCGGCTCTGCCAACA
TTAACGGCCGATCGTTGGATGGCTCACGGGATACTGAAATTGCAATTGCA
GCTTGGCAGCCTGAATATCTTGCCACTGGGAGCAATGGATATATGCCAAA
GGATGATGAGGGGTCACTTCCAAAGGGTGATGTGGCAGCATTCCGCGCCA
GTGTATGGGCTGAACATCTTGGAGATTATCAGGATGTGCTAGACGACCCT
TCTTCTCTAGAATGTGTTCAATACGTTCGCGAGAAGGCTGGTACAAACTG
GGAACATTTTGCTTCCGACGATCCGGAGTCTGTGTGCGACATGCCATACG
GTCACTTGGCTCTGTATCCGTACAAGTATGATGATGACACCGGTGAAGTT
ATTGCTGGCAATGACACGTTCCCCGACTTCCCCACCGCGCTGATTAAGGG
CAAAGCTTCGCCCGCTCTTCCAAACATGCTCACCGGCTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_24229:1044390..1046879- >Gvermi7034.t1 ID=Gvermi7034.t1|Name=Gvermi7034.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2490bp|location=Sequence derived from alignment at ScGOVlb_24229:1044390..1046879- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCGCAGAACCCCTCTGAATCACAGCCCGGCATCGGCGCCTTTCTTCA TGGGAGGCTTTCAATTTCTGTCCATGAGGCCCGCAACATTGAAGGCAAAG GCGCTTCGCGATTCTTCGAAAAGCTTGAGCGAGCCGTCACTTCCTCCATC GATGGCGTCGATCCGTATGTATCTGTAAAGATGGGATACAATAAGATCAT GCAGACTCCTGTTATTCACAATACCTCATCTCCTGTCTGGAACTCCACTA TTGATCTGGATGTTTGCCATGACTTAACCACTCTGGAATTCCGCGTCAAG GCGGCAAAACGAACCGGGGCGTTTGCCATTCTGTCTAAAGTGAAACATCT CAGTATGGCCTCCATACCGGCTGCTCAAATCCAGTATGAAAGATCTGTTT CCGATTGGATTCCGCTAGGGCCTTATGTCAGAGAAATCACGGAAGACTCA GAGTTTTCGAACAACGACGAGAAAGATGCCCCAGAGGAGCCAAAGCAATC GTCCAATTCTTACTTTGGAGAGATTAGAATATCAGTCACTTACACTCCGA TCACAGACCTGGACGACTATGAATCTGTTGCAATGCCAAACATGTACTTT CCCAAACGTGACGGCATAAATGTAACATTTTATCAGGACGCCGACAGTAT TCCTGGTTTTCTTCCAGTTATTCCGTTCCGCCCAGAGTACAGACATGCCC GATGCTGGTCAGAGATGGCACGCGCCATCATGTCTGCTACAGAACTCATC TACATCACCGGCTGGGCCGTTTGGCAAGATCTTGTAATGGTGCGTACGAA TTACGATGAAGACGAATGGAATGGACTAACCCTCGGAGAAATGCTCAAAC AAAAAGCCAATGAAGGCGTTACGGTTTGTGTCATGGTTTGGGACGAATAC GCCAGCAATCAGCTTTATCAGGGGATCATGGGCACACACGACGAGGAGAT TGTGCCGTATTTTGCCAACACAAGAGTCAATTGCATCAAAGTAGGCCGAC AAAATCCAAAGGATGGTCCTCTTGCCGATATGAATGATGCCATCATGTTC ACGCACCATCAGAAGACCGTCATTATTTCCCGCATGGATTCCAACATTGG TAAGAATCGATTGGAGGCTTGGGTTGGCGGACTTGACCTCACCGACGGTC GCTATGACAATCAAAACCACAGCCTATTTCGGACACTTGATTCTCTTCAT AAACCGCCAGACTTCTGGCAGGCTTGTGCTCTAGGCGTCACGGCGGTATC AGGTCCGAGAGAACCATGGCACGACATACATTCCCATGTAACCGGAACGG CAGCATGGGATGTATTGACAAACTTTGAAGGTCGATGGGCGCGTCAGGCA CCGGATCACATGAAGAATTCACTCCATCAACGATCAGAAGACACTTTTGT GTTGGCCTGGGAAGAAGTTCAGATTCAGGATGGAAGTTTCAGTGTTCAAG TTTTGCGCAGTATCAATGAGGCATCCACGCAACTTAGTAGGGATCGACCA GGATTAATGTCTCGAAGAAATGCCTTATCGGATCACAGCATCCATCGCGC ATACATTCACCAAATTCGCTCCGCAAAGCATTTCATTTACATCGAAAATC AGTACTTTCTCGGTTCGAGCCATTTATGGAATTCAAACCAAAGAGGCGGG TTTGCTGCGCATCTAGTTCCCATTGAAGTAGCTGAGAAGATTTGTGCCAA AATTCGAAGCGGTCAGCGATTTGCAGTGTACGTGAACATCCCGCTCTACC CTGAAGGCCCTCCAGATTCTGGGGCTGTGCAAGAAATTCTTTCTCATCAA CGCAAAACCATAAATCTCATTAGATCGAGAATCAAGAAGACTATTGACGA AGTCGGTAGCGATACTGTTGTTGAAGATTGGTTCAACGTGTTTTGTCTTG TGAATCGTGAATCCACTGAGGCTGGAAAAGGCAATGGCGGAACTAGCGAA CTTGAAGTGAAGCTTTCGAGTAGTCGAAGGTTCATGATTTACATTCACAG CAAATTTGCCATCTTTGACGATACTACGGCTATTATCGGCTCTGCCAACA TTAACGGCCGATCGTTGGATGGCTCACGGGATACTGAAATTGCAATTGCA GCTTGGCAGCCTGAATATCTTGCCACTGGGAGCAATGGATATATGCCAAA GGATGATGAGGGGTCACTTCCAAAGGGTGATGTGGCAGCATTCCGCGCCA GTGTATGGGCTGAACATCTTGGAGATTATCAGGATGTGCTAGACGACCCT TCTTCTCTAGAATGTGTTCAATACGTTCGCGAGAAGGCTGGTACAAACTG GGAACATTTTGCTTCCGACGATCCGGAGTCTGTGTGCGACATGCCATACG GTCACTTGGCTCTGTATCCGTACAAGTATGATGATGACACCGGTGAAGTT ATTGCTGGCAATGACACGTTCCCCGACTTCCCCACCGCGCTGATTAAGGG CAAAGCTTCGCCCGCTCTTCCAAACATGCTCACCGGCTGA back to top
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