Gvermi7017.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7017.t1
Unique NameGvermi7017.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length84
Homology
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A2V3J4I1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4I1_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 9.680e-48
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0
Query:    1 MTFLDSGRRDCLNKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRSCNARERY 83
            M FLD+GRR+CL KMKNGA+LGGSVGSAAGFLFGSYEA QIRGIPV+QKVGLVLRNSVGG IVFGFFLAIGTGIRSCNARERY
Sbjct:    1 MVFLDAGRRECLQKMKNGALLGGSVGSAAGFLFGSYEAAQIRGIPVAQKVGLVLRNSVGGSIVFGFFLAIGTGIRSCNARERY 83          
BLAST of Gvermi7017.t1 vs. uniprot
Match: R7QGG0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGG0_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 6.300e-37
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 MTFLDSGRRDCLNKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRSCNARER 82
            M FL++GRRDCL KMK GA++GG++G AA  +FG+YEA QIRGIP+SQK GLVLRNSVGG ++FGFFLAIG+GIRSC +RER
Sbjct:   35 MVFLNAGRRDCLEKMKRGAMVGGAIGGAACVVFGTYEAAQIRGIPISQKAGLVLRNSVGGSLLFGFFLAIGSGIRSCGSRER 116          
BLAST of Gvermi7017.t1 vs. uniprot
Match: M2XT73_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XT73_GALSU)

HSP 1 Score: 90.1 bits (222), Expect = 5.230e-22
Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    9 RDCLNKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRSCNARERY 83
            RDC+ K++ GA+LG  VG + G L+G +EA + +G+   Q++GL LR++VG  + FGFFLA+GTGIR C A ERY
Sbjct:    6 RDCMRKIQMGALLGSMVGGSFGLLYGGFEAFRHKGLTGPQRIGLALRSTVGAGMAFGFFLAVGTGIRGCGAHERY 80          
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A5J4ZAB8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAB8_PORPP)

HSP 1 Score: 69.3 bits (168), Expect = 7.950e-14
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   10 DCLNKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIR 75
            DC+ ++  GA LG  VG   G + G  EA   R IP SQKVG+VLR S+GG + FG F+A+GT +R
Sbjct:    8 DCVRRISGGAQLGAMVGFTFGAIAGGMEAMGYREIPASQKVGVVLRKSLGGSVAFGLFVAVGTLVR 73          
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A0M0JEX1_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEX1_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 3.620e-7
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    9 RDCLNKMKNGAILGGSVGSAAGFLFGSYEATQIRGI---PVSQKVGLVLRNSVGGCIVFGFFLAIGTGIR 75
            R C+ K++NGA++GG++GSA GF++G+Y A   R I   P+S     V+  + G    FGFFLA GT IR
Sbjct:   92 RQCMWKLQNGAMIGGALGSAIGFMYGTYAAIAYRHILYLPIS-----VVSTAAG----FGFFLACGTVIR 152          
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A167LE30_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167LE30_PHYB8)

HSP 1 Score: 51.2 bits (121), Expect = 1.600e-6
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   12 LNKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRS 76
            L KMK GA++GG+VG   GF+FGS    +  G      V L+ +  +G    FGFF++IG+ IRS
Sbjct:    6 LQKMKMGALMGGTVGLCVGFVFGSVSLIRF-GSGTKGPVTLLSQYMLGSAASFGFFMSIGSVIRS 69          
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A8H7QVB1_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QVB1_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 1.640e-6
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0
Query:   13 NKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRSCN 78
            +KMK GA +GG+VG   GF+FGS+   +  G      + ++ +  +G    FGFF+AIG+ +RS N
Sbjct:    7 DKMKMGAAMGGTVGLCIGFVFGSFTLMRF-GSGTKGPINMLSQYMLGSAASFGFFMAIGSVVRSEN 71          
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A8H7SS94_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SS94_9FUNG)

HSP 1 Score: 50.4 bits (119), Expect = 3.410e-6
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   13 NKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRSCN 78
            +KMK GA +GG+VG   GF+FGS    +  G      + ++ +  +G    FGFF+AIG+ +RS N
Sbjct:    7 DKMKMGATMGGTVGLCIGFVFGSISLMRF-GAGTKGPINMLSQYMLGSAASFGFFMAIGSVVRSEN 71          
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A3N4JSY2_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Choiromyces venosus 120613-1 TaxID=1336337 RepID=A0A3N4JSY2_9PEZI)

HSP 1 Score: 49.7 bits (117), Expect = 5.130e-6
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0
Query:   13 NKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRS 76
            +KMK GAI+G SVG   GFLFG Y   +  G   +  V  + +  +G    FGFF++IGT IR+
Sbjct:   22 DKMKLGAIMGTSVGLCIGFLFGGYNLIK-HGAGPNGFVRSLGQYMLGSAATFGFFMSIGTAIRT 84          
BLAST of Gvermi7017.t1 vs. uniprot
Match: A0A139A3C6_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A3C6_GONPJ)

HSP 1 Score: 50.1 bits (118), Expect = 7.250e-6
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0
Query:   13 NKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKVGLVLRNSVGGCIVFGFFLAIGTGIRSCNA 79
            +K K GA++GG+VG   GFLFGSY+     G      +G + R  +     FGFF+ IGT IR+  A
Sbjct:   20 DKFKMGALMGGTVGVCLGFLFGSYQVL-FHGPGQHGYMGTMSRAMLSSGTTFGFFMGIGTVIRTEEA 85          
The following BLAST results are available for this feature:
BLAST of Gvermi7017.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3J4I1_9FLOR9.680e-4890.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGG0_CHOCR6.300e-3771.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XT73_GALSU5.230e-2252.00Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A5J4ZAB8_PORPP7.950e-1450.00Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A0M0JEX1_9EUKA3.620e-745.71Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A167LE30_PHYB81.600e-643.08Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]
A0A8H7QVB1_9FUNG1.640e-639.39Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
A0A8H7SS94_9FUNG3.410e-639.39Uncharacterized protein n=1 Tax=Thamnidium elegans... [more]
A0A3N4JSY2_9PEZI5.130e-643.75Uncharacterized protein (Fragment) n=1 Tax=Choirom... [more]
A0A139A3C6_GONPJ7.250e-641.79Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018450Romo1/Mgr2SMARTSM01378Romo1_2coord: 9..76
e-value: 8.1E-17
score: 71.9
IPR018450Romo1/Mgr2PFAMPF10247Romo1coord: 11..76
e-value: 1.7E-14
score: 54.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..17
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:960198..960542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7017.t1Gvermi7017.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 960198..960542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7017.t1 ID=Gvermi7017.t1|Name=Gvermi7017.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=84bp
MTFLDSGRRDCLNKMKNGAILGGSVGSAAGFLFGSYEATQIRGIPVSQKV
GLVLRNSVGGCIVFGFFLAIGTGIRSCNARERY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018450Romo1/Mgr2