Gvermi6955.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6955.t1
Unique NameGvermi6955.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length451
Homology
BLAST of Gvermi6955.t1 vs. uniprot
Match: A0A2V3J4F4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F4_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 1.810e-35
Identity = 134/404 (33.17%), Postives = 200/404 (49.50%), Query Frame = 0
Query:   67 NKKRGVSLRKTRSRKPA-ASTPKSARFFTFTNRTPRTRMSKKTNLNDESSEQEYVENRNAEIRLNISSPSPSSIIQKDQNAESLLFAQ-RKRVSLHAIRFTKGNSTMLFGKRNSLSMPLTKNKSET-RDDLWFNSVASVEEQPAQ----GLKTRSLLDIGELPSVKAQRFSSLLLDDSGDVFVQSNKCGHGGSESAVNSTDNDDTSTLGD------SFDNTPPGGNRMFSFRGLFRDPLHRVHSAKSRHFSVGSHGFKS-----LLKPDEDGFNRFVRRSSSFPQ-ISRQEGRIEKASDSRNKKVASFDDGLQCPWGVKADTEDKPLSPKQNIPLTVRIADISSAL-NFTGRRGICSRSGSINLSDGDCEERNSENLGMENATVEMQEDDFIEYTVKMAKKQRK 450
            N++R  SLR +        S P+S +F    + TPR    K++ L D  + +   +  +   ++ +S  +       +QN  + L A  ++RVSL A+R TKGN TMLFGK  S+  PL+   S + + D + N    V   P      G +T+SLLD+      K    S+ L       F+ S++CG    E   +  D+ +T +         S      G   + + R LF+D +++  S K+ H+S GS G +S     L +      N  +RRSSS P  +++   +    S +    V + +D LQ PWGVKAD + +  S K +I    R+ADISSA+   TGRRG  S SGSI+LSD D         G  +  VEM +DDF+EYTVK A+K+RK
Sbjct:   73 NRRRAQSLRISHQHHSVKTSAPRSVKFLGLASITPRKGFFKRSPLGDRKAHEPEGDEMSDPFKMELSLLTSGDT---NQNVSADLSAMGKRRVSLRAMRLTKGNETMLFGKDISVCSPLSNPTSNSGKPDSYGNEALQVPSMPENASTLGSRTKSLLDLRSAKKRKEWGLSNTLC-----TFLPSSECGEEFKEELKDRDDDLETGSFHSEKSSKRSQSEPNSGFGTLPNLRLLFKDGIYQDRSTKTGHYSPGSAGVRSFHRYILGRGQASNNNNLIRRSSSLPDSLNKDFPQGNAYSPNPTVVVLTSEDALQSPWGVKAD-QFEVSSGKSSITRVSRMADISSAVYGLTGRRGKDSGSGSIHLSDEDDVRCEDVAEGSASGPVEMFQDDFVEYTVKKARKRRK 467          
The following BLAST results are available for this feature:
BLAST of Gvermi6955.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4F4_9FLOR1.810e-3533.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:741994..743346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6955.t1Gvermi6955.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 741994..743346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6955.t1 ID=Gvermi6955.t1|Name=Gvermi6955.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=451bp
MATSDAPVSPLQGLDSSRQTRSERRPGYWHKIFRIRKKEKEAVCDLEGNV
EASDSKHTISENDFNKNKKRGVSLRKTRSRKPAASTPKSARFFTFTNRTP
RTRMSKKTNLNDESSEQEYVENRNAEIRLNISSPSPSSIIQKDQNAESLL
FAQRKRVSLHAIRFTKGNSTMLFGKRNSLSMPLTKNKSETRDDLWFNSVA
SVEEQPAQGLKTRSLLDIGELPSVKAQRFSSLLLDDSGDVFVQSNKCGHG
GSESAVNSTDNDDTSTLGDSFDNTPPGGNRMFSFRGLFRDPLHRVHSAKS
RHFSVGSHGFKSLLKPDEDGFNRFVRRSSSFPQISRQEGRIEKASDSRNK
KVASFDDGLQCPWGVKADTEDKPLSPKQNIPLTVRIADISSALNFTGRRG
ICSRSGSINLSDGDCEERNSENLGMENATVEMQEDDFIEYTVKMAKKQRK
*
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