Gvermi7049.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7049.t1
Unique NameGvermi7049.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1140
Homology
BLAST of Gvermi7049.t1 vs. uniprot
Match: A0A2V3ID63_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID63_9FLOR)

HSP 1 Score: 646 bits (1667), Expect = 1.430e-209
Identity = 435/1198 (36.31%), Postives = 648/1198 (54.09%), Query Frame = 0
Query:    1 MEDGFSDPVRLPYFENSFSSVPTPCKDDFEQMLEAARKMSFDMRPVKQ---------------------------MKIDELMRKTSNALSKRVSKENSNGRFRRSAEERKRDWRAAMYHISIEE-IGYTSVRCNMPPTLLPSLLLDSHVNQRLDTSSVPLQPVSTTREFTAIASVWTNMVFDFEMLGTVLDDHQKTNQFLSKRCVRDTDIIDSAYRRSNSGSSIPDTILDFKSTDVWCLRPLTRHTSFTGNVYRTARNHLSIFGSGLSDCDFKCFPSQSISDDFALSGQTIE--EEIVFRSLRSIRKSIFERSILDQLMQIKEARSFSTGIQSF-CFPKFTRDD-------FFAQIGFS-LSSASTTILSKCILNTTTTSVLTVSDMRCKPRMTSDRNRYFPDLLRILCQHMKKRKSTA---LWSSGPKDVTRKCRLENSILSRVFLSRPSLLRITKKRD-FTNI--AQFGSENRIFGVER-AFTLLRIFGMNYASFLPLSVDLTECLRFSLGLEEQYRLETLQLFQR-CLEQHNNYDMMKKNKSIILTEHIRKAETEQVDTLLVKSPKQNGIDSAEGDKNDENTSQESALNDILTSDEDEQEPVVDSVTVDIQQLQKHHVKAVVGAEAENTGENSLG------GRDQQEPQK--VRLRVPENLMCSPWSLRLAEHCITNMTRGTILLPPYLSALPSLCVVINTHLSDQLHDHRVAVVCEADSDISNGLGSYLEHSFDHKMSVEIIRRWNLPNEPRYAPLFGCTAQILILDGFDFSVPKGVTLLLVLICEPRIIRSQLHLEHCPPQNSLNPEWPRLSSILIAPIDCWVPFPAYIERARRLSLQLKTDNVVFLADYDDVHISVLLAKPRAMFLVPLREATELISIIDAHSSETLCKLDEVFLQVRPTWRNIS-----ACRLSDFSVSFLKSILEDEVMKRSSETYCDLERVYYLGQARSYALCDGFDVAMAFLQHCCDELQPEVSGLLQNVVNEVGAIEVQSVEANRDHPIVSPVAAHIKKMKDNYKTESPSLSLTHRREIFLPLIVADSREAVDGFRRGGTKAKLLFEARENDIAVCWSIDLVSISTGKNKSIRERGVLERLKEFTHIYHIIDGRENTHSELQFPPAILHMVHAGRTRLITVLVDERRDRESVWMNSHTTYVTLRKHIGDQSRLSGFNEIQTLKEMKWKAVTRMLGSL 1138
            MED   DP+R+P +E    S    C +     LE   +MSF +RPVK+                           M I ++M++T   L  R  +   + + RR  E+RK DWR AM +I+ EE +  T+   +  P +L S + + H  Q LD   +P  P+S       +ASVWTN+VFD E+L  +L     T +F  +  ++   +  S +      +S+ +   D   +  + L P+   TS      + ++  LS            C      S       Q+++  +E + ++  SIR        L  L Q+   +  +  ++   C P   R D       +F    FS +         K IL+T+ T+V     M  +P+  +D +      L++L     KR   A   LWS+G  +V RKCR++++  S +   R  +LR  K R+ F ++  +  G    + G++R A  LLR +     +FLPL V++ E  R  +  E   + + L   ++  +E+ N +D++K+N  + L+  I K   +  D +  +    NG   AE   + E+TSQES L++IL S+ ++   V D +  D+        ++  G    N  + S+        R   + QK  +RLRVPE+ +CS WS+R AE+C+  M RGTILLPP LSALP+LC+VI +HL++QL D R+A++C+A++D+S GL +YLE+SF  K+S+EII R +   EPR+A +   TAQ+ ILD FDFS+P  V+LLL+LIC+P +  SQ   +    Q+ +NP+W  LSSILIAP+D WV F  Y++RA ++SL+L    V+F+ +YD VH SVLLAKPR +FLVPL +A+EL+S+ID HSS  L +L       +    ++S       +L D SV  L+  LED+     ++T  DLE  Y+L QARSYAL DGFDVA AFL HC  E+  + +  L+ V+ +V  I  +   A RDHPI+ PV  HI+K +  ++TE+PSL   HRR  F PLI+A+S E VDGFRRG  KAKL+ EA E D+AVCW  DL S+   +  +   + VLER++ F+HIYHII  R+ +H ++Q P  IL +VHAGRTRLITV VDERR  E  W  +  +Y  ++K++GDQ  L+G      L  +KW  V  M+ SL
Sbjct:   25 MEDIVWDPIRVPNYEEFDCSREGSCSEP--SWLEV--EMSFSLRPVKENAFKPSFLLLKPQEHSSRKHQSKHKCRMLITDIMQRTCRFLLGRTPRSAIHSKLRRPPEQRKNDWRGAMANIAFEEKLDRTTTPSHTFP-VLQSSVNEVHAQQTLDMDQIPSMPISFPSPSLELASVWTNLVFDCEVLQHLLHHIDSTAKFGFEESIQRDQVWQSQFETK---ASVFEDFFDLSPSASFNLHPV--ETSILSEFPKWSQRLLSEETGKNVTIGHLCQRDHVFS--ILTESQSLDRFDEDIMQAFDSIRAGSSHFLDLQHLTQVLGEQDTALKLRCMLCTPDIVRHDAHSVTRSWFMYSYFSPIMERELQTKIKTILHTSRTAV-----MFARPKRVTD-DETPSKFLKLLSTLHNKRNLIAEKCLWSTGSLEVMRKCRVQDTRRSNISNQRSYILREAKHRELFPSLENSYTGGGATMLGLDRHADELLRSYSSKTEAFLPLKVNVCEISRKDMRREIGMQAKPLLSHEKEIIEKLNTFDIIKRNPCVWLSAKILKIGAKPADAVSAQDCDTNGRSRAEHQTDSESTSQESLLDNILPSEGED--AVEDLIVPDLC----GKPESCTGTRKVNISQESIAKKLPLISRKNSKSQKDNLRLRVPESFVCSMWSVRAAEYCVVQMPRGTILLPPCLSALPTLCIVIYSHLANQLQDQRIAIICDAEADVSRGLHAYLENSFGRKVSIEIISRGSFSKEPRFASVNEYTAQVFILDSFDFSLPSRVSLLLILICQPHLFDSQTSFKSPYGQHLINPDWRHLSSILIAPLDSWVLFSEYVKRAEQISLELDMSAVLFIPEYDLVHHSVLLAKPRTLFLVPLSDASELVSVIDTHSSPILTRLRNFLNNAQIACCSLSNNSMFVPQLRDISVFLLRHCLEDQNRNIEAKTRADLETAYFLRQARSYALYDGFDVASAFLAHCVSEMSSKKTATLREVMKKVEYITAERTTAERDHPIIRPVMDHIRKARIAFRTEAPSLFSLHRRHAFRPLIIANSTETVDGFRRGTMKAKLILEAGERDLAVCWVNDLASLREKQGVNGYGKKVLERMELFSHIYHIIGDRDTSHPDIQLPAQILQLVHAGRTRLITVAVDERRKMEPTWTANEGSYSVMKKYLGDQRILAGMGTGNALCGLKWDTVQYMMSSL 1198          
BLAST of Gvermi7049.t1 vs. uniprot
Match: R7QGP8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGP8_CHOCR)

HSP 1 Score: 259 bits (661), Expect = 4.610e-68
Identity = 162/513 (31.58%), Postives = 269/513 (52.44%), Query Frame = 0
Query:  595 QQEPQKVRLRVPENLMCSPWSLRLAEHCITNMTRGTILLPPYLSALPSLCVVINTHLSDQLHDHRVAVVCEADSDISNGLGSYLEHSFDHKMSVEIIRRWNLPNEPRYAPLFGCTAQILILDGFDFSVPKGVTLLLVLICE--PRIIRSQLHLEHCPPQN-SLNPEWPRLSSILIAPIDCWVPFPAYIERARRLSLQLKTDNVVFLADYDDVHISVLLAKPRAMFLVPLREATELISIIDAHSSETLCKLDEVFLQVRPTWRNISACRLSDFSVSFLKSILEDEVMKRSSETY-CDLERVYYLGQARSYALCDGFDVAMAFLQHCCDELQPEVSGLLQNVVNEVGAIEVQSVEANRD--HPIVSPVAAHIKKMKDNYKTESPSLSLTHRREIFLPLIVADSREAVDGFRRGGTKAKLLFEARENDIAVCWSIDLVSISTGKNKSIRERGVLERLKEFTHIYHIIDGRENTHSELQFPPAILHMVHAGRTRLITVLVDERRDRESVWMNSHTTY 1101
            +QE  K+ L  PENL+C+  SL+LA H +    RG + LPP LS L +L V+IN+ LS+ + DHRVAVVCE ++ +   + SYL+ +FD K+S+++ RR +    P  A L   TA+++ILD F+F+V  G  LL+V   E    +      L     +  S    W  + S+L+ P        +Y ++  R +  L   +  F+ + DD+   +LL++   +FLVP R+  E I++++  +S       ++    +       +C L D  ++ L+  L +EV  + +ET    LE +Y L QARSYAL DG++ A+A+L H       +    LQ+++ +V A   QS + N    HP+ + +      M+   + ++ SL   HRR  F  L++ +S+E+ DG  +    ++ + +A + +I +C    L +    K    R     E   +F+H+YH+++ R+    +   PP ++  +HAGRT+LITV VDE R  ES+     T Y
Sbjct:  339 RQESGKLFLEAPENLVCASSSLQLAAHFLRCNVRGVVYLPPQLSFLSALAVIINSFLSEPMCDHRVAVVCEPNAGMGETVNSYLDFTFDGKVSIDVARRADFATHPPLASLTKKTARVVILDSFEFTVSPGFALLVVFAPEVSSTLFEGPQSLSRSGTKVLSAASIWKSIPSVLVLPSYFHDTVISYSQKVPRFANLLDLKDTYFILEKDDIEHLLLLSRRSFLFLVPPRDVLEFIALLETEASSFFPAYQKIAAAEQCNTGGCISC-LQDVDITVLEKHLREEVSHQRTETSGYTLEILYSLRQARSYALYDGYNAAVAYLNHYSQAASSKTLAALQSILADVPAPG-QSSDKNSSETHPVATALENSFLSMEGEMENQAASLRSIHRRSKFRVLVITNSKESYDGLIKSLKNSRYILKAADGEIGLCELRHLWNGVENKRGGYRNEEC-EASTKFSHVYHVVNDRKGRSRDHFLPPLLMQYIHAGRTKLITVAVDETRTLESIHDRDVTLY 848          
The following BLAST results are available for this feature:
BLAST of Gvermi7049.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ID63_9FLOR1.430e-20936.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGP8_CHOCR4.610e-6831.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 519..551

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1304480..1308133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7049.t1Gvermi7049.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1304480..1308133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7049.t1 ID=Gvermi7049.t1|Name=Gvermi7049.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1140bp
MEDGFSDPVRLPYFENSFSSVPTPCKDDFEQMLEAARKMSFDMRPVKQMK
IDELMRKTSNALSKRVSKENSNGRFRRSAEERKRDWRAAMYHISIEEIGY
TSVRCNMPPTLLPSLLLDSHVNQRLDTSSVPLQPVSTTREFTAIASVWTN
MVFDFEMLGTVLDDHQKTNQFLSKRCVRDTDIIDSAYRRSNSGSSIPDTI
LDFKSTDVWCLRPLTRHTSFTGNVYRTARNHLSIFGSGLSDCDFKCFPSQ
SISDDFALSGQTIEEEIVFRSLRSIRKSIFERSILDQLMQIKEARSFSTG
IQSFCFPKFTRDDFFAQIGFSLSSASTTILSKCILNTTTTSVLTVSDMRC
KPRMTSDRNRYFPDLLRILCQHMKKRKSTALWSSGPKDVTRKCRLENSIL
SRVFLSRPSLLRITKKRDFTNIAQFGSENRIFGVERAFTLLRIFGMNYAS
FLPLSVDLTECLRFSLGLEEQYRLETLQLFQRCLEQHNNYDMMKKNKSII
LTEHIRKAETEQVDTLLVKSPKQNGIDSAEGDKNDENTSQESALNDILTS
DEDEQEPVVDSVTVDIQQLQKHHVKAVVGAEAENTGENSLGGRDQQEPQK
VRLRVPENLMCSPWSLRLAEHCITNMTRGTILLPPYLSALPSLCVVINTH
LSDQLHDHRVAVVCEADSDISNGLGSYLEHSFDHKMSVEIIRRWNLPNEP
RYAPLFGCTAQILILDGFDFSVPKGVTLLLVLICEPRIIRSQLHLEHCPP
QNSLNPEWPRLSSILIAPIDCWVPFPAYIERARRLSLQLKTDNVVFLADY
DDVHISVLLAKPRAMFLVPLREATELISIIDAHSSETLCKLDEVFLQVRP
TWRNISACRLSDFSVSFLKSILEDEVMKRSSETYCDLERVYYLGQARSYA
LCDGFDVAMAFLQHCCDELQPEVSGLLQNVVNEVGAIEVQSVEANRDHPI
VSPVAAHIKKMKDNYKTESPSLSLTHRREIFLPLIVADSREAVDGFRRGG
TKAKLLFEARENDIAVCWSIDLVSISTGKNKSIRERGVLERLKEFTHIYH
IIDGRENTHSELQFPPAILHMVHAGRTRLITVLVDERRDRESVWMNSHTT
YVTLRKHIGDQSRLSGFNEIQTLKEMKWKAVTRMLGSLL*
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