Gvermi6986.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6986.t1
Unique NameGvermi6986.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length280
Homology
BLAST of Gvermi6986.t1 vs. uniprot
Match: A0A2V3J4C3_9FLOR (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4C3_9FLOR)

HSP 1 Score: 379 bits (974), Expect = 2.700e-130
Identity = 193/279 (69.18%), Postives = 221/279 (79.21%), Query Frame = 0
Query:    1 MGGTASRASELSTSDDSQNSSDANLSQEPYSSLDVDDRNNSGTEHIVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLPRILASAPIDRRQRSHMSGTDFVRLNHLFLIHSESSYGSGQTRTMATERRFKDKRVTTILVTTSGRAPPDSMSEPPTYRRTRSDPIPIPDASEQTMSESQSLLLDALNNV 279
            MGGTASRA+E+S+ D  Q S DA +  E  ++L +DDRNN+  EHIVP EFKW  GGYSVYVTGAWDDW  +TQLSRT P EFATVLALP GTFQYKFIVDGNW+H+P DPT RD +GNLNNVI VTPQ PEYDSN+PL  +  +RSPVESY+Y+ L EEDHTTE P+LPRILASAPIDRR  S MSGTDFVRLNH+FLI S+S+YG GQTR++ATE+RFK+K +TTILVTT GR          +Y   RS PIPI +A  Q MSESQSLLLDALNNV
Sbjct:    1 MGGTASRATEISSPDYPQGSGDAIVPPERRAALAIDDRNNNSIEHIVPTEFKWKLGGYSVYVTGAWDDWRHRTQLSRTTPVEFATVLALPVGTFQYKFIVDGNWRHSPSDPTGRDPNGNLNNVIVVTPQLPEYDSNDPLDTETQARSPVESYDYSTLPEEDHTTEPPSLPRILASAPIDRRSHSFMSGTDFVRLNHMFLIDSDSTYGPGQTRSLATEQRFKEKIITTILVTTKGRVSHHEGMSQQSYTGRRSQPIPIQEAPMQPMSESQSLLLDALNNV 279          
BLAST of Gvermi6986.t1 vs. uniprot
Match: R7Q5V1_CHOCR (AMPKBI domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5V1_CHOCR)

HSP 1 Score: 280 bits (717), Expect = 5.170e-89
Identity = 152/279 (54.48%), Postives = 193/279 (69.18%), Query Frame = 0
Query:    1 MGGTASRASELSTSDDSQNSSDANLSQEPYSSLDVDDRNNSGTEHIVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLPRILASAPIDRRQRSHMSGTDFVRLNHLFLIHSESSYGSGQTRTMATERRFKDKRVTTILVTTSGRAPPDSMSEPPT-YRRTRSDPIPIPDASEQTMSESQSLLLDALNN 278
            MG  ASRA E + +   Q S+D +L  E  +SL  DDRN S   +I   EF WS GG SVYVTGAWDDW  K  LSRT PT+F  VLALP GTFQYKFIVDGNWKH+P  PT RD HGNLNN++ V    PEYDSN  +   ++  SPVESY++++L +EDHTTE PTLPR+LASAP+D        G DFVR NH+F  +S+  YG+ +  T+A+E R+K+K +TTIL+ ++ +A  D +S P   YR+TR+ P+PI   + Q+M ESQSL+LDALNN
Sbjct:    1 MGVAASRADEFAPT---QESTDGDL-PESSASLSNDDRNGSSLANITITEFIWSFGGSSVYVTGAWDDWRVKAALSRTSPTDFTAVLALPVGTFQYKFIVDGNWKHSPALPTERDQHGNLNNIVVVKANVPEYDSNVQIYPQDVPNSPVESYDFSILPQEDHTTEPPTLPRLLASAPLDAMTDEPRHGADFVRFNHMFSTNSDIPYGTHEISTLASETRYKNKIITTILIASTNKAQ-DRLSVPVQGYRQTRTHPVPI---THQSMGESQSLILDALNN 271          
BLAST of Gvermi6986.t1 vs. uniprot
Match: A0A5J4Z6T7_PORPP (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6T7_PORPP)

HSP 1 Score: 127 bits (318), Expect = 6.400e-31
Identity = 73/222 (32.88%), Postives = 111/222 (50.00%), Query Frame = 0
Query:   45 HIVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLPRILASAPIDRRQ----------------RSHMSGTDFVRL----------------NHLFLIH---SESSYGSGQTRTMATERRFKDKRVTTILVT 231
            +IVP  F WS+GG  V+VTGAWD W  K Q+ R    E+  +L+L  G FQYKFIVDG W+H    PT RD HGN+NN++ V P   E+D  +  +      SP+ESY++++ A E++  + P LP    S  +++                  RS  SG D   +                NH+ + H   +  ++   + + +   RR++DK +T +L T
Sbjct:  100 NIVPTVFTWSHGGNQVFVTGAWDHWQSKAQMHRAG-NEYMVILSLQCGRFQYKFIVDGEWRHCASQPTERDEHGNVNNMVEVRPHVSEFDLPDIQTGLRRPPSPIESYDFSMPAPEEYAIDPPQLPPHYHSVVLNQSASSVAAQQKNMHATAVVRSPASGVDLAFIQNSGELPPDASTCEVPNHVSIRHLYTASKTHAEEEVQVVGITRRYRDKFITMVLYT 320          
BLAST of Gvermi6986.t1 vs. uniprot
Match: A0A7S3EJW8_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJW8_9RHOD)

HSP 1 Score: 119 bits (299), Expect = 2.800e-29
Identity = 77/198 (38.89%), Postives = 107/198 (54.04%), Query Frame = 0
Query:   47 VPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNE-PLSVDELSRSPVESYNYTLL-AEEDHTTEAPTLPRILASAPIDRRQRSHMSGTDFVRLNHLFLIHSESS---YGSGQTRTMATERRFKDKRVTTILVTTSGRAPPD 239
            VP  F W+ GG  +YVTGAWD W  K  LSR    EF  VL LP G FQYK+IVDG W+ +   PT RD HGNLNNV+ V  Q   +D NE P + + LS  P+E+Y+ ++   +E   +E P LP +    PI  ++R    G      +H+ + H  ++   +       +   RR++ K VTT++   S R  PD
Sbjct:   26 VPTTFSWNLGGQQIYVTGAWDQWQTKQPLSR-FGNEFTAVLLLPVGKFQYKYIVDGEWRPHREQPTERDEHGNLNNVVEVVEQKSAFDPNEAPTAAEPLS--PLETYDDSVPNTDELRMSEIPELPELYRD-PILNKERG---GGQLDIPSHVCVGHLNTATRHFEDENITVLGITRRWRGKYVTTVIY--SPRRDPD 214          
BLAST of Gvermi6986.t1 vs. uniprot
Match: C1FEH4_MICCC (Carbohydrate-binding module family 48 protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEH4_MICCC)

HSP 1 Score: 110 bits (276), Expect = 7.090e-26
Identity = 70/193 (36.27%), Postives = 97/193 (50.26%), Query Frame = 0
Query:   43 TEHIVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEY-DSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLPRILASAPIDRRQ----RSHMSGTDFVRLNHLFLIHSESSYGSGQTRTMATERRFKDKRVTTILV 230
            T  +VP+   W+ GG  V V G++D+W  +  L R+   EFA V  LP G +QYKFIVDG WK+ P  P   D  GN+NNV+ V    PE  DS +         SP ESYN  L + +D   + P  P  L    ++  Q     + +     V LNH   I+++ +     T+ M T  R++ K VT ILV
Sbjct:   27 TPTLVPVAISWTQGGSIVEVEGSFDNWQSRQALHRSGTREFAIVKMLPPGVYQYKFIVDGEWKYAPDQPAMYDEMGNVNNVLEVQEYIPEILDSLDSFLAPS---SPTESYNNILFSPDDFAKDPPACPPHLHLTLLNMPQIPDAPNLLPRPQHVVLNH---IYNDKNMTLAGTQVMGTTHRYRSKYVTVILV 213          
BLAST of Gvermi6986.t1 vs. uniprot
Match: A0A6V7Q4J8_ANACO (AMPKBI domain-containing protein n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7Q4J8_ANACO)

HSP 1 Score: 109 bits (273), Expect = 7.030e-25
Identity = 77/206 (37.38%), Postives = 103/206 (50.00%), Query Frame = 0
Query:   29 PYSSLDVDDRNNSGTEHIVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLP-----RILASAPIDRRQRSHMSGTDFVRLNHLFLIHSESSYGSGQTRTMATERRFKDKRVTTIL 229
            P +S+D +    S  E  +P    WS+GG  V+V G+WD+W  K  L R+   EFA +  LP+G +QYKFIVDG WK+ P  P  RDA GN+ N++ +    P  D    ++  E  +SP  SYN  LL  ED   E P +P      IL S        S +S    V LNHL+ IH   S        + +  RF  K VT +L
Sbjct:   76 PRNSIDKE----SFYEEGIPTMITWSHGGREVFVEGSWDNWKTKKLLQRSGK-EFAIMKVLPSGYYQYKFIVDGEWKYAPDMPWFRDATGNVYNILDIKEYVP--DDLGSIAGFESPQSPESSYNNWLLGPEDFAKEPPAVPPQLQLTILNSPTNVNSSSSSLSRPPHVVLNHLY-IHKNFS----PVVALGSTSRFLAKYVTVVL 269          
BLAST of Gvermi6986.t1 vs. uniprot
Match: A0A061RNQ7_9CHLO (5'-AMP-activated protein kinase, regulatory beta subunit n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNQ7_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 2.610e-24
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 0
Query:   46 IVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNEPLSVD--ELSRSPVESYNYTLLAEEDHTTEAPTLPRILASAPIDRRQRSHMSGTDFVRLNHLFLIH--SESSYGSGQTRTMATERRFKDKRVTTILVTTSGR 235
            + P  F WS+GG  V V G++D+W+ + ++ R+   +F  V  LP G +QYKFIVDG WK++P  P   D  GN+NNV+ V     EY  +E  +V   E   SP ESY+  L   +D T   P +P  L  + ++ +  +H       R  H+ L H  S++++ +     M    R++ K VTT++   S R
Sbjct:   78 LFPTVFYWSHGGSHVEVQGSFDNWTTRQEMQRSGK-DFTIVKLLPPGVYQYKFIVDGEWKYDPEQPAMFDEIGNVNNVLEVQ----EYTPDEYSTVQGFEPPASPPESYDCPLPMADDFTKAPPAMPPQLNLSLLNVQAPAHADNKSLPRPQHVILDHLYSQTAHTTVDAVVMGATMRYRSKYVTTVIYKPSKR 266          
BLAST of Gvermi6986.t1 vs. uniprot
Match: C1MGX7_MICPC (Carbohydrate-binding module family 48 protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MGX7_MICPC)

HSP 1 Score: 106 bits (265), Expect = 3.830e-24
Identity = 66/190 (34.74%), Postives = 93/190 (48.95%), Query Frame = 0
Query:   46 IVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEY-DSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLPRILASAPIDRRQ----RSHMSGTDFVRLNHLFLIHSESSYGSGQTRTMATERRFKDKRVTTILV 230
            +VP+   W+ GG  V V G++D+W  +  L R+   EFA V  LP G +QYKFIVDG WK+ P  P   D  GN+NNV+ V    PE  DS +         SP ESY+  L  ++D   E P  P  L    ++  Q     + +     V LNH++   ++   G      M T  R++ K VT + V
Sbjct:   42 LVPVAINWNQGGTVVEVEGSFDNWQSRQALHRSGNREFAVVKMLPPGVYQYKFIVDGEWKYAPDQPAMYDEMGNVNNVLEVQEYVPEILDSLDSFLAPS---SPPESYDCALFTQDDFAKEPPACPPHLHLTLLNMPQIPDAPNLLPRPQHVVLNHMYNDRTKQQRGQ---HVMGTTHRYRSKYVTVVFV 225          
BLAST of Gvermi6986.t1 vs. uniprot
Match: A0A383VKB4_TETOB (AMPKBI domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKB4_TETOB)

HSP 1 Score: 107 bits (268), Expect = 4.030e-24
Identity = 65/188 (34.57%), Postives = 97/188 (51.60%), Query Frame = 0
Query:   46 IVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLPR----ILASAPIDRRQRSHMSGTDFVRLNHLFLIHSESSYGSGQTRTMATERRFKDKRVTTIL 229
            +VP+   WS+GG  V V G++D+WS +  L RT   +F  +  LP G +QYKFIVDG+WK++P  P   D  GN+NNVI V    PE  + E +S  +   SP  SYN      ED+  E P +P      L + P      + +     V LNH+++   ++         + T  R+K K +T++L
Sbjct:   72 LVPVVIAWSHGGEHVEVEGSFDNWSTRQPLQRTG-RDFTVIKLLPPGVYQYKFIVDGDWKYDPNQPAMFDEIGNVNNVIEVQEYVPE--NLENVSGFDPPPSPPASYNNPHPVAEDYAKEPPVMPPHLQLTLLNVPSSAEGAASLPRPQHVILNHIYIQRGQTM----NALVVGTTHRYKGKYITSVL 252          
BLAST of Gvermi6986.t1 vs. uniprot
Match: A0A7S0GSY0_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GSY0_MICPS)

HSP 1 Score: 107 bits (266), Expect = 5.780e-24
Identity = 70/187 (37.43%), Postives = 91/187 (48.66%), Query Frame = 0
Query:   46 IVPIEFKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIVDGNWKHNPMDPTARDAHGNLNNVITVTPQPPEY-DSNEPLSVDELSRSPVESYNYTLLAEEDHTTEAPTLPRILASAPIDRRQRSHMSGTDFVRLNHLFLIHSESSYGSGQ-TRTMATERRFKDKRVTTILV 230
            +VP+   W+ GG  V V G++D+W  +  L R+   EFA V  LP G +QYKFIVDG WK+ P  P   D  GN+NNV+ V    PE  DS +         SP ESYN  L + ED   E P  P  L    ++  Q          R  H  L H  +S  SG   + M T  R++ K VT + V
Sbjct:   77 LVPVAVNWTQGGSVVEVEGSFDNWQSRQALHRSGNREFAIVKMLPPGVYQYKFIVDGEWKYAPDQPAMYDEMGNVNNVLEVQEYVPEILDSLDSFLAPS---SPPESYNNALFSPEDFAKEPPACPPHLHLTLLNVPQIPDAPNL-LPRPMHTVLNHIYNSGPSGMGVQVMGTTHRYRSKYVTVVYV 259          
The following BLAST results are available for this feature:
BLAST of Gvermi6986.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4C3_9FLOR2.700e-13069.18SNF1-related protein kinase regulatory subunit bet... [more]
R7Q5V1_CHOCR5.170e-8954.48AMPKBI domain-containing protein n=1 Tax=Chondrus ... [more]
A0A5J4Z6T7_PORPP6.400e-3132.88SNF1-related protein kinase regulatory subunit bet... [more]
A0A7S3EJW8_9RHOD2.800e-2938.89Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
C1FEH4_MICCC7.090e-2636.27Carbohydrate-binding module family 48 protein n=1 ... [more]
A0A6V7Q4J8_ANACO7.030e-2537.38AMPKBI domain-containing protein n=4 Tax=Ananas co... [more]
A0A061RNQ7_9CHLO2.610e-2434.025'-AMP-activated protein kinase, regulatory beta s... [more]
C1MGX7_MICPC3.830e-2434.74Carbohydrate-binding module family 48 protein n=1 ... [more]
A0A383VKB4_TETOB4.030e-2434.57AMPKBI domain-containing protein n=1 Tax=Tetradesm... [more]
A0A7S0GSY0_MICPS5.780e-2437.43Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 45..127
e-value: 3.1E-27
score: 96.4
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 47..129
e-value: 1.0E-29
score: 102.5
NoneNo IPR availableGENE3D6.20.250.60coord: 138..232
e-value: 4.8E-7
score: 31.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 48..126
e-value: 4.24815E-32
score: 111.537
IPR043554SNF1-related protein kinase regulatory subunit betaPANTHERPTHR46316SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1coord: 18..230
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 46..127
IPR037256ASC domain superfamilySUPERFAMILY160219AMPKBI-likecoord: 142..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:836277..837274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6986.t1Gvermi6986.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 836277..837274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6986.t1 ID=Gvermi6986.t1|Name=Gvermi6986.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=280bp
MGGTASRASELSTSDDSQNSSDANLSQEPYSSLDVDDRNNSGTEHIVPIE
FKWSNGGYSVYVTGAWDDWSRKTQLSRTHPTEFATVLALPAGTFQYKFIV
DGNWKHNPMDPTARDAHGNLNNVITVTPQPPEYDSNEPLSVDELSRSPVE
SYNYTLLAEEDHTTEAPTLPRILASAPIDRRQRSHMSGTDFVRLNHLFLI
HSESSYGSGQTRTMATERRFKDKRVTTILVTTSGRAPPDSMSEPPTYRRT
RSDPIPIPDASEQTMSESQSLLLDALNNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR043554KINB
IPR014756Ig_E-set
IPR037256ASC_dom_sf