Gvermi7103.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7103.t1
Unique NameGvermi7103.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length448
Homology
BLAST of Gvermi7103.t1 vs. uniprot
Match: A0A2V3ITX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITX8_9FLOR)

HSP 1 Score: 441 bits (1133), Expect = 1.580e-149
Identity = 225/435 (51.72%), Postives = 290/435 (66.67%), Query Frame = 0
Query:    1 MDAVFQLLLFMGVFHGALQLDATELCAMPRRNRTFCGDATDIALGDDRVKSSKPNQCRVGCQSFSHPDITMTTRSAKCAFDLCDLVQPFRTFDHGTRMCQPRAVCISACGEEPPGCVYSGTCREFTCFHDRNTGRPANFTRITYAGPRTIVRVNDSVTSDKSPYDNSLDAVLISRDNCDGTYYRIDSKVCGESGDALLSV--DEEQEFVQCRNVCRNIQNDAVEIVRMRTSCDLCSSEAEKSVCIPQSECQASCEMPFTNVAGCVFTGTCKSMICVSGIDSKLPAVVAVTNDTGLGGVIVSVDNSKAPTTLDPPVYAKYLEDIFVPDSRIEDNANDNEQVTTADHLEGPTAATEPEKVKTPKNATASFEVDVVKGPRNKTLEEPSNKTENGETSKWGWLGPIVGLLGAFITALAALAAAYITRGTKVHRRKKDSP 433
            M+ V +L + + + H A      E C    RN T C +A D+ALGDDR+   KPNQCRVGC+ F+HPDI M+ RSA C+FDLCD+  PFRTF  GTRMCQPRA+CIS+CGEEPPGCVYSGTCREFTCFHD+NTG PA+FTR+T+AGPR+IVRVN+SVTSD       +DAVLIS D C           C ES +  LS   D+++EFVQCR  CRNI+N+ VEIVRMRT+C  CSS +   +CI QSEC+  C  P   V GCVFTG+CKS++CVSGIDSKLPAVV V+++TG GG+IVSVDN++   ++DPPV+ KYLE+  VP++ I      +  V    +++          +   +NA+ +          N +   P+ K+++ + SKW WLGP +GL GA ITALAA+ AAYI R    +R +   P
Sbjct:    1 MNVVLRLTVILTLMHAAPTQSENEPCRSSLRNVTSCNNAVDVALGDDRIAGEKPNQCRVGCKYFTHPDIAMSIRSANCSFDLCDVPLPFRTFTFGTRMCQPRALCISSCGEEPPGCVYSGTCREFTCFHDKNTGLPASFTRLTFAGPRSIVRVNESVTSDTPSTYGPVDAVLISGDRCSDDNRPRTYGHCAESTNVFLSDQGDDDEEFVQCRRACRNIRNEEVEIVRMRTNCKSCSSLSPPYLCIAQSECRDRCNAPL--VEGCVFTGSCKSLVCVSGIDSKLPAVVNVSDETGKGGIIVSVDNARLTASIDPPVFVKYLENRRVPNASIPVTVTGDSHVPLVQNVD----------ISDSENASTNT---------NNSASSPT-KSQDEQVSKWLWLGPTIGLFGALITALAAIVAAYIARNGITNRTRNKKP 413          
BLAST of Gvermi7103.t1 vs. uniprot
Match: A0A2V3ITZ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITZ2_9FLOR)

HSP 1 Score: 241 bits (616), Expect = 1.740e-73
Identity = 138/311 (44.37%), Postives = 189/311 (60.77%), Query Frame = 0
Query:  127 CFHDRNTGRPANFTRITYAGPRTIVRVNDSVTSDKSPYDNSLDAVLISRDNCDGTYYRIDSKVCGESGDALLSV--DEEQEFVQCRNVCRNIQNDAVEIVRMRTSCDLCSSEAEKSVCIPQSECQASCEMPFTNVAGCVFTGTCKSMICVSGIDSKLPAVVAVTNDTGLGGVIVSVDNSKAPTTLDPPVYAKYLEDIFVPDSRIEDNANDNEQVTTADHLEGPTAATEPEKVKTPKNATASFEVDVVKGPRNKTLEEPSNKTENGETSKWGWLGPIVGLLGAFITALAALAAAYITRGTKVHRRKKDSPHR 435
            C    NTG+ A+FTR+ +AGPR+IVRVN+SVTSD       +DAVLIS D C           C ES +  LS   D+++EFVQC   CRNI+N+ VEI RMRT+C  CSS ++  + I QSEC+  C  P   V GCVF G+CKS++CVSGIDSKLPAVV V++DTG GG+IVSVDN++   ++DPPV+ KY+E++ VP++ I      +  V    +++     ++ E   T  N +AS   +                +++ + SKW WLGP +G LGA ITALAA+ AAYI +       K+ +P R
Sbjct:    5 CIGQENTGKHASFTRLKFAGPRSIVRVNESVTSDTPSKYGPVDAVLISEDRCSDDNRPRTHGHCAESTNLYLSDQGDDDEEFVQCSRACRNIRNEEVEIFRMRTNCKSCSSLSQPYLSIAQSECRDRCNAPL--VEGCVFPGSCKSLVCVSGIDSKLPAVVNVSDDTGKGGIIVSVDNARLTASIDPPVFVKYVENMRVPNASIPVTFTGDSHVPLVQNVD----ISDSENASTNTNNSASSPTE----------------SQDEQVSKWLWLGPTIGSLGAIITALAAIVAAYIAQN------KEQTPQR 287          
The following BLAST results are available for this feature:
BLAST of Gvermi7103.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITX8_9FLOR1.580e-14951.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITZ2_9FLOR1.740e-7344.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 394..420
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..393
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 421..447
NoneNo IPR availableTMHMMTMhelixcoord: 397..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1706980..1708323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7103.t1Gvermi7103.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1706980..1708323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7103.t1 ID=Gvermi7103.t1|Name=Gvermi7103.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=448bp
MDAVFQLLLFMGVFHGALQLDATELCAMPRRNRTFCGDATDIALGDDRVK
SSKPNQCRVGCQSFSHPDITMTTRSAKCAFDLCDLVQPFRTFDHGTRMCQ
PRAVCISACGEEPPGCVYSGTCREFTCFHDRNTGRPANFTRITYAGPRTI
VRVNDSVTSDKSPYDNSLDAVLISRDNCDGTYYRIDSKVCGESGDALLSV
DEEQEFVQCRNVCRNIQNDAVEIVRMRTSCDLCSSEAEKSVCIPQSECQA
SCEMPFTNVAGCVFTGTCKSMICVSGIDSKLPAVVAVTNDTGLGGVIVSV
DNSKAPTTLDPPVYAKYLEDIFVPDSRIEDNANDNEQVTTADHLEGPTAA
TEPEKVKTPKNATASFEVDVVKGPRNKTLEEPSNKTENGETSKWGWLGPI
VGLLGAFITALAALAAAYITRGTKVHRRKKDSPHRDVSLCDVDIDKL*
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