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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 554065.XP_005845210.1 |
| PFAMs | GCD14 |
| Max annot lvl | 3041|Chlorophyta |
| KEGG ko | ko:K07442 |
| Evalue | 2.4e-31 |
| EggNOG OGs | COG2519@1|root,KOG2915@2759|Eukaryota,37HZ2@33090|Viridiplantae,34HD5@3041|Chlorophyta |
| EC | 2.1.1.219,2.1.1.220 |
| Description | tRNA (adenine(58)-N(1))-methyltransferase |
| COG category | H |
| BRITE | ko00000,ko01000,ko03016 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi7037.t1 ID=Gvermi7037.t1|Name=Gvermi7037.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=619bp MAYAMRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAV APHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPD ASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRRE PFYDIRTGRKIAGNAAPLAKNLDDYLRKHPHCERYNGQDRATRYTQHRRI LPVGANVPHPRAPPPHMVLPMQTVLPLPLQGYPSTNPLHLPLHLVSYPMP LDPANVQLYNPQQRPAYFVPHYPVPADPAQHHPHPQSHSSNKRLNHPPAL AATPFAVPAADQPAPLHPKLARHAAESTVANALANANAQMRAHANCTVPT SHPRLSAMTLSDSLSQALDLNTTQLSSDAAKNERKQLADDIDKVLNSAGM SVGLSNPCTISPSTANHLFDASCRWNNDRNPASVSRSLSFMLKNNAPFAS RENSMDFRKGDFGAKREMSMDMIRRDISMDLLSARRIGSQERIGGELVRD MSIDFFGGSLRNANRDFSMEMQFPTDYNGAQSGAVFELGSLADDAVFGQP LQSLPAPSKSEHNGAATEGRDSRFPRSKIGMSQDDLMVHVLANQGVHQQF RRTVNGSVEDLRELKMPF* back to topspliced messenger RNA >Gvermi7037.t1 ID=Gvermi7037.t1|Name=Gvermi7037.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1857bp|location=Sequence derived from alignment at ScGOVlb_24229:1106841..1110636+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGTACGCCATGCGCCACCACACGCAGGTGGTGTACCCGCACGACGC CGCCGTCGTGCGCGCGCTGCTCGCGCTGCGCCCCGGCATGGTCGTGGCCG AGTGCGGCACCGGCTCCGCCGCCGCCGCGCTCGCCTTCGCCGCCGCCGTC GCCCCCCACGGCCGCGTGCTCTCGTTCGAGTTCCACCGCCAGCGCGCCGC CGCCGCCACCGCGCTGCTGCGCGCCCTCCGCCTGCACCGCGTCGTCTCCG TGCGCCCCGCCGTCGACGTCGTGCGCCACGGCTTTGCGCACGTCCCCGAC GCCAGCGTCGACGCCGTCTTCCTCGACGTGCCCGCCCCCTTCCTGCTCGT CGCCGAGGCCCGCCGCATCCTGCGCCGCAACGGCGCCCTGTGCGCCTTCT CGCCCTGCGTCGAGCAGGTGTCGCGCACATGCGCCCGCCTCCGCCGCGAG CCCTTCTACGACATccgcaccGGCCGCAAAATCGCCGGCAACGCCGCCCC GCTCGCCAAGAACCTCGACGACTACCTGCGGAAACACCCCCACTGCGAGC GCTACAATGGCCAGGATCGCGCCACCCGCTACACCCAGCACCGCCGCATC CTccccgtcggcgccaacgtcccgcacccgcgagcgcccccgccccACAT GGTCCTCCCCATGCAGACCGTCCTCCCGCTCCCGCTGCAGGGCTACCCCT CCACCAACCCCCTGCACCTCCCGCTGCACCTCGTGTCCTACCCCATGCCG CTGGACCCTGCCAACGTCCAACTCTACAACCCGCAGCAGCGCCCCGCCTA CTTTGTCCCGCACTATCCCGTCCCCGCCGATCCCGCCCAACACCACCCCC ACCCCCAATCCCACTCCTCCAACAAGCGTCTCAATCACCCGCCCGCGCTC GCTGCCACCCCGTTCGCCGTCCCCGCCGCCGATCAACCCGCCCCGCTCCA CCCCAAGCTCGCGCGCCACGCCGCCGAGTCCACGGTTGCCAACGCCCTTG CCAATGCCAACGCCCAGATGCGCGCCCACGCCAACTGCACCGTGCCCACG TCGCACCCGCGCCTCTCCGCTATGACGCTGTCCGATTCGCTTTCGCAAGC GCTGGACCTCAACACTACGCAGCTGTCGTCCGACGCGGCCAAGAACGAGC GCAAGCAACTGGCCGACGACATTGACAAGGTGCTCAACAGCGCCGGCATG TCGGTGGGCCTGTCGAATCCATGTACCATATCGCCCAGCACGGCCAACCA CTTGTTTGACGCCTCTTGCCGCTGGAATAACGACAGGAATCCGGCGTCGG TCAGTCGCTCCCTCAGCTTTATGCTCAAGAACAACGCACCGTTCGCGTCG CGGGAGAACTCGATGGACTTTCGCAAGGGCGACTTTGGCGCTAAGCGCGA AATGTCCATGGACATGATCCGCAGGGACATTTCGATGGACTTGCTGTCGG CGAGGCGCATTGGGTCGCAGGAGCGCATCGGCGGCGAGCTTGTGCGAGAC ATGAGCATTGACTTCTTTGGAGGCTCACTGCGCAACGCCAACCGCGACTT CAGCATGGAGATGCAGTTTCCGACCGACTACAACGGCGCGCAATCGGGCG CCGTGTTCGAGCTAGGCTCCTTGGCCGATGACGCTGTGTTTGGCCAGCCG TTGCAAAGTTTGCCTGCCCCGTCCAAGTCGGAGCACAACGGTGCTGCGAC TGAAGGACGTGACAGCAGATTCCCGAGGTCCAAGATTGGAATGTCTCAGG ATGACCTCATGGTGCACGTGCTGGCCAACCAGGGCGTCCACCAGCAATTC CGACGTACCGTGAACGGAAGCGTGGAAGATCTGCGCGAACTCAAAATGCC CTTCTAG back to topprotein sequence of Gvermi7037.t1 >Gvermi7037.t1 ID=Gvermi7037.t1|Name=Gvermi7037.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=619bp
MAYAMRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAV APHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPD ASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRRE PFYDIRTGRKIAGNAAPLAKNLDDYLRKHPHCERYNGQDRATRYTQHRRI LPVGANVPHPRAPPPHMVLPMQTVLPLPLQGYPSTNPLHLPLHLVSYPMP LDPANVQLYNPQQRPAYFVPHYPVPADPAQHHPHPQSHSSNKRLNHPPAL AATPFAVPAADQPAPLHPKLARHAAESTVANALANANAQMRAHANCTVPT SHPRLSAMTLSDSLSQALDLNTTQLSSDAAKNERKQLADDIDKVLNSAGM SVGLSNPCTISPSTANHLFDASCRWNNDRNPASVSRSLSFMLKNNAPFAS RENSMDFRKGDFGAKREMSMDMIRRDISMDLLSARRIGSQERIGGELVRD MSIDFFGGSLRNANRDFSMEMQFPTDYNGAQSGAVFELGSLADDAVFGQP LQSLPAPSKSEHNGAATEGRDSRFPRSKIGMSQDDLMVHVLANQGVHQQF RRTVNGSVEDLRELKMPF* back to topmRNA from alignment at ScGOVlb_24229:1106841..1110636+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi7037.t1 ID=Gvermi7037.t1|Name=Gvermi7037.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=3796bp|location=Sequence derived from alignment at ScGOVlb_24229:1106841..1110636+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGCGTACGCCATGCGCCACCACACGCAGGTGGTGTACCCGCACGACGC
CGCCGTCGTGCGCGCGCTGCTCGCGCTGCGCCCCGGCATGGTCGTGGCCG
AGTGCGGCACCGGCTCCGCCGCCGCCGCGCTCGCCTTCGCCGCCGCCGTC
GCCCCCCACGGCCGCGTGCTCTCGTTCGAGTTCCACCGCCAGCGCGCCGC
CGCCGCCACCGCGCTGCTGCGCGCCCTCCGCCTGCACCGCGTCGTCTCCG
TGCGCCCCGCCGTCGACGTCGTGCGCCACGGCTTTGCGCACGTCCCCGAC
GCCAGCGTCGACGCCGTCTTCCTCGACGTGCCCGCCCCCTTCCTGCTCGT
CGCCGAGGCCCGCCGCATCCTGCGCCGCAACGGCGCCCTGTGCGCCTTCT
CGCCCTGCGTCGAGCAGGTGTCGCGCACATGCGCCCGCCTCCGCCGCGAG
CCCTTCTACGACATccgcaccgtcaccgccccgctgcgcaccTGGCACac
gcgcccggccgccgccgccaccgccgccaccgccgccaccgccgccaccg
ccaccgccgccgccgccgccgcgcgcaagcgccccgccgccgccgccgcc
ccgCccgccaccgccgactccgcgccgcccgccaagcgccgccgtgccgc
cgccgccaccgccgctgacccccccgcgcagcccctccacaaaccccccg
acacccactccgccgaagccgatgcgcacgccgtcgacgccgacgccgac
gcagcGCTGCACATAGGGCGCGTGATGCGGCCGCGCGCGGCGCTGCGCAG
CCGGCCGTTCTCGCCCATGAAGGGGCACACCAGCTTCCTCACGTTCGCGC
GCCGCGCGGCCGACCGCCGCGCGGCCGcgccgtcgccgccgtcgtcgccg
ccgccgccgtcgccgACGCGCGGCTGCGCCATGACGTGAGCGCGCCGCGC
CTTGCGCAAGCGCTGCGCTGATTTATGCGCCTCCTGCGCCTAGTCATATG
AAGGCCGCTTTTTGAGCGCTTTTGCCGTTGTTTGCAAGTCTATACAGCCC
CCCCCGCTCTGCGCTGCGCGTGCGCACGCCACACCCCCCCCCCCCCTCCC
TTCCCACACGCCGCTCGCGCCCTCCGCCCGCGCTAGCGCTCCGCCAATTG
AGCTTccccccccccccccccccctccgccATGTTGCCCCCAATGTcgcc
gcccgccgccgcccccacctccgccgccgcTACTACCGCCtccgccttct
ccgccgcaaccacccccgccaccgccaccgccaccgccacctccaccgcc
acctccaccgcccacaccaccgccgaccccgccagcCCCGCAAACACCTC
CACCGCCACCTCcaccaccaacaacgacaacatcaaaatcaaccacagcc
gcaacggtaccttcagcagcagcagcagcaggcacagcTcctccccctcc
ccctcccactcccccgcccccaccgcctTCAAGCACACTCCTCCCGATCA
CAAGCGCATCACCATCTGGAACCGCGTGCAGGGCCGCAAAATCGCCGGCA
ACGCCGCCCCGCTCGCCAAGAACCTCGACGACTACCTGCGGAAACACCCC
CACTGCGAGCGCTACAATGGCCAGGATCGCGCCACCCGCTACACCCAGCA
CCGCCGCATCCTccccgtcggcgccaacgtcccgcacccgcgagcgcccc
cgccccACATGGTCCTCCCCATGCAGACCGTCCTCCCGCTCCCGCTGCAG
GGCTACCCCTCCACCAACCCCCTGCACCTCCCGCTGCACCTCGTGTCCTA
CCCCATGCCGCTGGACCCTGCCAACGTCCAACTCTACAACCCGCAGCAGC
GCCCCGCCTACTTTGTCCCGCACTATCCCGTCCCCGCCGATCCCGCCCAA
CACCACCCCCACCCCCAATCCCACTCCTCCAACAAGCGTCTCAATCACCC
GCCCGCGCTCGCTGCCACCCCGTTCGCCGTCCCCGCCGCCGATCAACCCG
CCCCGCTCCACCCCAAGCTCGCGCGCCACGCCGCCGAGTCCACGGTTGCC
AACGCCCTTGCCAATGCCAACGCCCAGATGCGCGCCCACGCCAACTGCAC
CGTGCCCACGTCGCACCCGCGCCTCTCCGCGTCCACCACCACCTGCTCAT
CATCCGTCTGCTCCaccgcggccgtagccgccgccgccgccgctgccgct
gccgctgccgccgccgccgctggacccgctgcccgcaccgccgcctcctc
cgccgcctccTCCCCGCCCTGTGCCGCCCCAAAACAGCCGCTGGACACGC
TCGATGTCCAACTTTCCCCCGCGCAGCTCTTCAAGGACATGAAGGACATG
ATGCAGAAAAAGGCCCAGCAGGCGTCGTCGCGCCCGCAGCACGCTCAGCT
CAACGGCGCTTCCGCCGCCGCGTCTGTGCAAATGCCCATCGCCAACATGC
CGTCGTTGTTGCCGCCGTCGCATCAAATGCCGCCTGTCACCAACCCGCTG
CAGCACATGCTTCATCGCAATGCCATgcagcagcagcagcagcagcagca
gcggcagcagcagcagcagcagcaacagcacaagcagcagcagcacaagc
agcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcacaagcagcagcagcagcagcagcacaaacagcagcagcagca
gcagcagcagcagcagcagcagcagcagcagcagcGGCAACAACAACAGC
CGCAGGAGAACGCGCGGCTTGAGCCGCGCGTTTCCACGTCGGCTTCTGTC
GCTTTTGGGCAGGCTTCGCAGTCTTCCTCCCTGACCGCGTTTGATGTGGA
TCTGGCCACCTTTCAACTCGCCGGCACTCGCATCGATGAGCCGCGTTCGC
CTCGCAGCGCGCCAcagcagcagcagcagcagcagcagcagcagcagcCC
CCGCGTGCGTTGCATGTGTCGCTTGTTGCGTCCCCGTCGCAAGACATTTT
GCCGTCCAGTATGACGCTGTCCGATTCGCTTTCGCAAGCGCTGGACCTCA
ACACTACGCAGCTGTCGTCCGACGCGGCCAAGAACGAGCGCAAGCAACTG
GCCGACGACATTGACAAGGTGCTCAACAGCGCCGGCATGTCGGTGGGCCT
GTCGAATCCATGTACCATATCGCCCAGCACGGCCAACCACTTGTTTGACG
CCTCTTGCCGCTGGAATAACGACAGGAATCCGGCGTCGGTCAGTCGCTCC
CTCAGCTTTATGCTCAAGAACAACGCACCGTTCGCGTCGCGGGAGAACTC
GATGGACTTTCGCAAGGGCGACTTTGGCGCTAAGCGCGAAATGTCCATGG
ACATGATCCGCAGGGACATTTCGATGGACTTGCTGTCGGCGAGGCGCATT
GGGTCGCAGGAGCGCATCGGCGGCGAGCTTGTGCGAGACATGAGCATTGA
CTTCTTTGGAGGCTCACTGCGCAACGCCAACCGCGACTTCAGCATGGAGA
TGCAGTTTCCGACCGACTACAACGGCGCGCAATCGGGCGCCGTGTTCGAG
CTAGGCTCCTTGGCCGATGACGCTGTGTTTGGCCAGCCGTTGCAAAGTTT
GCCTGCCCCGTCCAAGTCGGAGCACAACGGTGCTGCGACTGAAGGACGTG
ACAGCAGATTCCCGAGGTCCAAGATTGGAATGTCTCAGGATGACCTCATG
GTGCACGTGCTGGCCAACCAGGGCGTCCACCAGCAATTCCGACGTACCGT
GAACGGAAGCGTGGAAGATCTGCGCGAACTCAAAATGCCCTTCTAG back to topCoding sequence (CDS) from alignment at ScGOVlb_24229:1106841..1110636+ >Gvermi7037.t1 ID=Gvermi7037.t1|Name=Gvermi7037.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1857bp|location=Sequence derived from alignment at ScGOVlb_24229:1106841..1110636+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGCGTACGCCATGCGCCACCACACGCAGGTGGTGTACCCGCACGACGC CGCCGTCGTGCGCGCGCTGCTCGCGCTGCGCCCCGGCATGGTCGTGGCCG AGTGCGGCACCGGCTCCGCCGCCGCCGCGCTCGCCTTCGCCGCCGCCGTC GCCCCCCACGGCCGCGTGCTCTCGTTCGAGTTCCACCGCCAGCGCGCCGC CGCCGCCACCGCGCTGCTGCGCGCCCTCCGCCTGCACCGCGTCGTCTCCG TGCGCCCCGCCGTCGACGTCGTGCGCCACGGCTTTGCGCACGTCCCCGAC GCCAGCGTCGACGCCGTCTTCCTCGACGTGCCCGCCCCCTTCCTGCTCGT CGCCGAGGCCCGCCGCATCCTGCGCCGCAACGGCGCCCTGTGCGCCTTCT CGCCCTGCGTCGAGCAGGTGTCGCGCACATGCGCCCGCCTCCGCCGCGAG CCCTTCTACGACATccgcaccGGCCGCAAAATCGCCGGCAACGCCGCCCC GCTCGCCAAGAACCTCGACGACTACCTGCGGAAACACCCCCACTGCGAGC GCTACAATGGCCAGGATCGCGCCACCCGCTACACCCAGCACCGCCGCATC CTccccgtcggcgccaacgtcccgcacccgcgagcgcccccgccccACAT GGTCCTCCCCATGCAGACCGTCCTCCCGCTCCCGCTGCAGGGCTACCCCT CCACCAACCCCCTGCACCTCCCGCTGCACCTCGTGTCCTACCCCATGCCG CTGGACCCTGCCAACGTCCAACTCTACAACCCGCAGCAGCGCCCCGCCTA CTTTGTCCCGCACTATCCCGTCCCCGCCGATCCCGCCCAACACCACCCCC ACCCCCAATCCCACTCCTCCAACAAGCGTCTCAATCACCCGCCCGCGCTC GCTGCCACCCCGTTCGCCGTCCCCGCCGCCGATCAACCCGCCCCGCTCCA CCCCAAGCTCGCGCGCCACGCCGCCGAGTCCACGGTTGCCAACGCCCTTG CCAATGCCAACGCCCAGATGCGCGCCCACGCCAACTGCACCGTGCCCACG TCGCACCCGCGCCTCTCCGCTATGACGCTGTCCGATTCGCTTTCGCAAGC GCTGGACCTCAACACTACGCAGCTGTCGTCCGACGCGGCCAAGAACGAGC GCAAGCAACTGGCCGACGACATTGACAAGGTGCTCAACAGCGCCGGCATG TCGGTGGGCCTGTCGAATCCATGTACCATATCGCCCAGCACGGCCAACCA CTTGTTTGACGCCTCTTGCCGCTGGAATAACGACAGGAATCCGGCGTCGG TCAGTCGCTCCCTCAGCTTTATGCTCAAGAACAACGCACCGTTCGCGTCG CGGGAGAACTCGATGGACTTTCGCAAGGGCGACTTTGGCGCTAAGCGCGA AATGTCCATGGACATGATCCGCAGGGACATTTCGATGGACTTGCTGTCGG CGAGGCGCATTGGGTCGCAGGAGCGCATCGGCGGCGAGCTTGTGCGAGAC ATGAGCATTGACTTCTTTGGAGGCTCACTGCGCAACGCCAACCGCGACTT CAGCATGGAGATGCAGTTTCCGACCGACTACAACGGCGCGCAATCGGGCG CCGTGTTCGAGCTAGGCTCCTTGGCCGATGACGCTGTGTTTGGCCAGCCG TTGCAAAGTTTGCCTGCCCCGTCCAAGTCGGAGCACAACGGTGCTGCGAC TGAAGGACGTGACAGCAGATTCCCGAGGTCCAAGATTGGAATGTCTCAGG ATGACCTCATGGTGCACGTGCTGGCCAACCAGGGCGTCCACCAGCAATTC CGACGTACCGTGAACGGAAGCGTGGAAGATCTGCGCGAACTCAAAATGCC CTTCTAG back to top
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