Gvermi6981.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6981.t1
Unique NameGvermi6981.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length776
Homology
BLAST of Gvermi6981.t1 vs. uniprot
Match: A0A2V3J7S9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7S9_9FLOR)

HSP 1 Score: 342 bits (876), Expect = 1.900e-106
Identity = 182/347 (52.45%), Postives = 230/347 (66.28%), Query Frame = 0
Query:   22 CTSTMDLSTFLMKSFRANADLIRLGVPSEFVKRYFDKAVMDVTLSCNCSSSTIDDNCVSLFFAETMEVSYIKDLLEIDSVMTE-QTDNVASR------KLFPLYQANVTLHGLSVAQTDELNKALNHLLLNSQSIVNIQSRYWQRSRFPSDEQFFQDTFAAQKDACDLYQSHVNLDNRTFPAWGATTYVIGLFLEVHKAKGNETAAMEMIADHTRFAFNGARCFRVSGSQLRYPVIKMEQYMRIARTLLDETNTLFKP-ELKDIRKVSAVPMLYHSRLVNILSSLSSNGDGETILTTDGSTIRREHVINILTDNLEVANVVDSNPIQYECPDGYILASRAVPLVLQD 360
            CTST+ L+ FL  SF  NADLIR GVPSE V +Y+D+AVMDV   CNCSS ++D+ CV L F E++E+S +K  L+ DS++++ Q D V+        KLFPLY    TL GLS  QT+ELN  L  LL  S+S+V+IQS YWQRSRFPSDE FFQDT+ +QK AC  YQ    +DNRTFPAW AT YVIGL  EV KA+G  +AA++++A H  F FNGARC+RV+G +L  PV KME+Y+  A+ LL+E      P  L DIRKVS     +  RLV  LSSLSSNGDG T+L TDG+TI R  V  +L  +  +   +   P  YECP+ +I  SR +PL   D
Sbjct:   22 CTSTIGLNAFLSTSFLVNADLIRFGVPSEVVTKYYDRAVMDVARFCNCSSVSVDETCVQLIFEESLELSLLKGALDADSLLSKGQRDQVSPTAPENKVKLFPLYDPGKTLSGLSSTQTEELNSHLTRLLSASKSVVSIQSEYWQRSRFPSDETFFQDTYESQKAACGEYQVASKMDNRTFPAWAATAYVIGLVQEVRKAQGEVSAAIDILAAHASFVFNGARCYRVNGLKLHIPVRKMEEYLATAQKLLNEAGQRSHPIPLNDIRKVSESSATFFPRLVTKLSSLSSNGDGRTVLVTDGTTIERALVNTLLMGDPLLLGEITLGPAAYECPERWIRVSRVLPLANMD 368          
BLAST of Gvermi6981.t1 vs. uniprot
Match: A0A2V3J4E3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4E3_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 1.730e-72
Identity = 135/290 (46.55%), Postives = 187/290 (64.48%), Query Frame = 0
Query:  358 LQDSYQANANLVRLGVASQVVGVFYNDALRYVARECNCSSTLLDEPCVDTKFNANSEVAALRNLADSDEGVATASRLFRLYDSQKTLLPLSGDEQDRLDLGLELLKTHTESLQIINSPAWQPAQFPSDEAFFQDDSSAREAACASFNAVTHPNNITFPATAVTAYVLSLVQVVRVANLAAMNGKKVPAKKMAASMAAANAILHNHTSFVFEGVRCKKQSGDALHMPITYMEDYKTQVELLLAALPNTETVSLNNVRSVIASAKKYLPTLVQKLSSLESYGDSDSILYTDA 647
            L DSYQANANL+R G  S++V   Y+ +L  +A  C CS+T +D+ CV T FN ++EV+ LR+  D+D       +LFRLYDS K L  L+ ++   L+     L + T     I SPAWQ + FPSD+ FFQDD+S ++ AC +FNAVTHP  +T+PA++ TAYV+ LVQ VR A L                MA    IL NHT+FV+ GVRC K SGD LH+P+TY+EDYK  +E +L++  +T+T  L NVR ++ ++K +LP+LV KLS+L SYGDS ++L  +A
Sbjct:   36 LNDSYQANANLIRFGAPSEIVRALYDHSLIEMASSCECSTTTVDQFCVHTIFNLDNEVSVLRSTIDTDATTVGTDKLFRLYDSSKVLDSLAANQIASLEFCRTHLLSLTPDTTTIKSPAWQRSIFPSDDVFFQDDASGQKDACNTFNAVTHPQGLTYPASSATAYVIGLVQSVRKAKL---------------DMAVPLQILANHTTFVYNGVRCNKLSGDRLHIPVTYLEDYKKTIESILSSA-STDTGILRNVRELLQNSKMFLPSLVDKLSALISYGDSATVLVANA 309          
The following BLAST results are available for this feature:
BLAST of Gvermi6981.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J7S9_9FLOR1.900e-10652.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4E3_9FLOR1.730e-7246.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..775
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:807065..810391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6981.t1Gvermi6981.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 807065..810391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6981.t1 ID=Gvermi6981.t1|Name=Gvermi6981.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=776bp
MTPVAPLFLMLFFNHALGQTFCTSTMDLSTFLMKSFRANADLIRLGVPSE
FVKRYFDKAVMDVTLSCNCSSSTIDDNCVSLFFAETMEVSYIKDLLEIDS
VMTEQTDNVASRKLFPLYQANVTLHGLSVAQTDELNKALNHLLLNSQSIV
NIQSRYWQRSRFPSDEQFFQDTFAAQKDACDLYQSHVNLDNRTFPAWGAT
TYVIGLFLEVHKAKGNETAAMEMIADHTRFAFNGARCFRVSGSQLRYPVI
KMEQYMRIARTLLDETNTLFKPELKDIRKVSAVPMLYHSRLVNILSSLSS
NGDGETILTTDGSTIRREHVINILTDNLEVANVVDSNPIQYECPDGYILA
SRAVPLVLQDSYQANANLVRLGVASQVVGVFYNDALRYVARECNCSSTLL
DEPCVDTKFNANSEVAALRNLADSDEGVATASRLFRLYDSQKTLLPLSGD
EQDRLDLGLELLKTHTESLQIINSPAWQPAQFPSDEAFFQDDSSAREAAC
ASFNAVTHPNNITFPATAVTAYVLSLVQVVRVANLAAMNGKKVPAKKMAA
SMAAANAILHNHTSFVFEGVRCKKQSGDALHMPITYMEDYKTQVELLLAA
LPNTETVSLNNVRSVIASAKKYLPTLVQKLSSLESYGDSDSILYTDAKSQ
VLVERKSVNEIMANDAGVVTNGYQFVDVVGGGPGNGIVGGGGGFCTAGWT
HVSRAVSVMSADEECCSEMCTLLSLSLSDPFLWGIEQENCCQHCNMYVCA
DQGLLSSSISLQMAPPIVYPTTVDL*
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