Gvermi6921.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6921.t1
Unique NameGvermi6921.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length242
Homology
BLAST of Gvermi6921.t1 vs. uniprot
Match: A0A2V3IN28_9FLOR (Dihydroxy-acid dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN28_9FLOR)

HSP 1 Score: 114 bits (286), Expect = 1.450e-25
Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    2 THANATPCMAHVNASRNSVAR-CRNTCRKAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRNAPVVVILIDPAHIP 109
            TH NATPC AH++     V +    T  KAF+FGT VISDG  M T+GMRYSL+SRDL+  CIETM+  +LADGM TL GCDKS+  A MPILRN  + V+L   + +P
Sbjct:  103 THTNATPCNAHMSVLGEEVQKHVEQTGGKAFVFGTPVISDGETMGTSGMRYSLVSRDLIADCIETMHEGYLADGMITLGGCDKSIPGALMPILRNDSIGVMLYGGSILP 211          
BLAST of Gvermi6921.t1 vs. uniprot
Match: R7QIR0_CHOCR (Dihydroxy-acid dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIR0_CHOCR)

HSP 1 Score: 112 bits (281), Expect = 6.050e-25
Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    2 THANATPCMAHVNASRNSVAR-CRNTCRKAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRNAPVVVILIDPAHIP 109
            TH NATPC AH+N    ++ +   +   KAF+FGT VISDG  M T GMRYSL+SRDL+  CIETM+  +LADGM TL GCDKS+  A MPILRN  + V+L   + +P
Sbjct:   59 THTNATPCNAHMNELGEALQKEVESIGGKAFVFGTPVISDGETMGTLGMRYSLVSRDLIADCIETMHEGYLADGMITLGGCDKSIPGALMPILRNDSIGVMLYGGSILP 167          
BLAST of Gvermi6921.t1 vs. uniprot
Match: A0A1X6NT62_PORUM (Dihydroxy-acid dehydratase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NT62_PORUM)

HSP 1 Score: 106 bits (264), Expect = 1.220e-22
Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 0
Query:    2 THANATPCMAHVNASRNSVARCRNTCR-KAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRNAPVVVILIDPAHIP 109
            TH  ATPC AH++     V         K+FLFGT VISDG  M T+GMRYSL+SRDL+  CIETM+  +LADGM TL GCDKS+  A MPILR+  + V+L   + +P
Sbjct:   70 THTTATPCNAHIDQLGRLVGDAVGDAGGKSFLFGTPVISDGETMGTSGMRYSLVSRDLIADCIETMHEGYLADGMLTLGGCDKSIPGALMPILRHDSMGVMLYGGSILP 178          
BLAST of Gvermi6921.t1 vs. uniprot
Match: A0A5J4YJF1_PORPP (Dihydroxy-acid dehydratase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJF1_PORPP)

HSP 1 Score: 103 bits (257), Expect = 1.140e-21
Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    2 THANATPCMAHVNASRNSVARC-RNTCRKAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRN 95
            T+ NATPC  H+N     + +       KAF +GT VISDG  M T+GMRYSLISRDL+  CIE M+  +LADGM TL GCDKS+  A MPILRN
Sbjct:  112 TYTNATPCNVHINELGAELEKMVEKFGGKAFTYGTPVISDGETMGTSGMRYSLISRDLIADCIEAMHDGYLADGMLTLGGCDKSIPGALMPILRN 206          
BLAST of Gvermi6921.t1 vs. uniprot
Match: A0A7S1XDF4_9RHOD (Dihydroxy-acid dehydratase n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDF4_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 2.090e-21
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0
Query:    2 THANATPCMAHVNASRNSVAR-CRNTCRKAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRNAPVVVILIDPAHIP 109
            TH NATPC AH++     +    +    K F+FGT VISDG  M TTGMRYSL+SRDL+  CIETM+  +L+DG+ T+ GCDKS+  A MP+LR   + V+L   + +P
Sbjct:  114 THTNATPCNAHLDQLGAVIMEEVKQRGGKPFVFGTPVISDGETMGTTGMRYSLVSRDLIADCIETMHEGYLSDGLITMGGCDKSIPGALMPLLRTDAMGVMLYGGSILP 222          
BLAST of Gvermi6921.t1 vs. uniprot
Match: M2XUE3_GALSU (Dihydroxy-acid dehydratase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUE3_GALSU)

HSP 1 Score: 101 bits (252), Expect = 5.400e-21
Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 0
Query:    2 THANATPCMAHVNASRNSV-ARCRNTCRKAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRN 95
            T  NATPC AH++   + + A   +   K F+FGT VISDG  M T+GMRYSL+SRDL+  CIE M+  +LADGM TL GCDKS+  A MPILR 
Sbjct:  141 TFTNATPCNAHMDQLGDKLLATVESLGAKGFIFGTPVISDGETMGTSGMRYSLVSRDLIADCIECMHEGYLADGMLTLGGCDKSIPGALMPILRT 235          
BLAST of Gvermi6921.t1 vs. uniprot
Match: A0A7S0G7R9_9RHOD (Dihydroxy-acid dehydratase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G7R9_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 8.040e-20
Identity = 51/97 (52.58%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    2 THANATPCMAHVNASRNSVARCRNTCR---KAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRN 95
            TH NATPC +H+    + +  C    +   K F+FGT VISDG  M T+GMRYSL+SRDL+  CIETM+  +L D + TL GCDKS+  A MPILR+
Sbjct:   87 THTNATPCNSHMLDLGDLI--CEEVTKAGGKPFIFGTPVISDGETMGTSGMRYSLVSRDLIADCIETMHEGYLCDALITLGGCDKSIPGALMPILRS 181          
BLAST of Gvermi6921.t1 vs. uniprot
Match: A0A1F8YNC8_9DELT (Dihydroxy-acid dehydratase n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F8YNC8_9DELT)

HSP 1 Score: 97.1 bits (240), Expect = 1.930e-19
Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    3 HANATPCMAHVNASRNSVARCRNTCR-KAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRN 95
            + NATPC  H+    + +AR   T   + FLFGT VISDG  M   GM+YSL+SRDL+  CIETM+  + ADG+ TLSGCDKS+  A MPILRN
Sbjct:   53 YTNATPCNDHLRKLGDILAREVETAGGRPFLFGTPVISDGETMGMEGMKYSLMSRDLIADCIETMHEGYAADGILTLSGCDKSIPGALMPILRN 146          
BLAST of Gvermi6921.t1 vs. uniprot
Match: A0A7Y2KJA7_9DELT (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y2KJA7_9DELT)

HSP 1 Score: 95.1 bits (235), Expect = 5.420e-19
Identity = 50/92 (54.35%), Postives = 62/92 (67.39%), Query Frame = 0
Query:    5 NATPCMAHVNASRNSVARCRNTCR-KAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRN 95
            NATPC  H+    + +++       K FLFGT VISDG  M   GM+YSL+SRDL+  CIETM+  + ADG+ TLSGCDKS+  A MPILRN
Sbjct:   50 NATPCNDHIRELGDILSQAIGEAGGKPFLFGTPVISDGETMGMEGMKYSLMSRDLIADCIETMHEGYAADGILTLSGCDKSIPGALMPILRN 141          
BLAST of Gvermi6921.t1 vs. uniprot
Match: M1UR25_CYAM1 (Dihydroxy-acid dehydratase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UR25_CYAM1)

HSP 1 Score: 94.4 bits (233), Expect = 1.760e-18
Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 0
Query:    2 THANATPCMAH-VNASRNSVARCRNTCRKAFLFGTIVISDGNNMETTGMRYSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRNAPVVVILIDPAHIPSIVNKFMSKIKA 121
            T+ NATPC  H +  +R    R  +   K  L GT V+SDG  M T GMRYSL+SRDL+  CIE  +  ++ADG+ TL GCDK++  A MP+LRN  + V L   + +P    K +  I A
Sbjct:  115 TYTNATPCNDHMIELARIIADRIESRGGKPLLHGTPVVSDGETMGTPGMRYSLVSRDLIADCIECQHEAYMADGLITLGGCDKTIPGALMPLLRNDSIGVFLYGGSILPGGPEKNLDVISA 235          
The following BLAST results are available for this feature:
BLAST of Gvermi6921.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN28_9FLOR1.450e-2555.96Dihydroxy-acid dehydratase n=1 Tax=Gracilariopsis ... [more]
R7QIR0_CHOCR6.050e-2555.05Dihydroxy-acid dehydratase n=1 Tax=Chondrus crispu... [more]
A0A1X6NT62_PORUM1.220e-2253.21Dihydroxy-acid dehydratase n=1 Tax=Porphyra umbili... [more]
A0A5J4YJF1_PORPP1.140e-2156.84Dihydroxy-acid dehydratase n=1 Tax=Porphyridium pu... [more]
A0A7S1XDF4_9RHOD2.090e-2149.54Dihydroxy-acid dehydratase n=2 Tax=Compsopogon cae... [more]
M2XUE3_GALSU5.400e-2155.79Dihydroxy-acid dehydratase n=1 Tax=Galdieria sulph... [more]
A0A7S0G7R9_9RHOD8.040e-2052.58Dihydroxy-acid dehydratase n=1 Tax=Rhodosorus mari... [more]
A0A1F8YNC8_9DELT1.930e-1955.32Dihydroxy-acid dehydratase n=2 Tax=unclassified De... [more]
A0A7Y2KJA7_9DELT5.420e-1954.35Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Delt... [more]
M1UR25_CYAM11.760e-1843.80Dihydroxy-acid dehydratase n=1 Tax=Cyanidioschyzon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..241
NoneNo IPR availablePANTHERPTHR21000:SF5DIHYDROXY-ACID DEHYDRATASE, MITOCHONDRIALcoord: 4..102
NoneNo IPR availablePANTHERPTHR21000DIHYDROXY-ACID DEHYDRATASE DADcoord: 4..102
IPR000581Dihydroxy-acid/6-phosphogluconate dehydratasePFAMPF00920ILVD_EDDcoord: 3..164
e-value: 3.4E-19
score: 68.9
IPR037237IlvD/EDD, N-terminal domainSUPERFAMILY143975IlvD/EDD N-terminal domain-likecoord: 3..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:485317..501880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6921.t1Gvermi6921.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 485317..501880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6921.t1 ID=Gvermi6921.t1|Name=Gvermi6921.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=242bp
MTHANATPCMAHVNASRNSVARCRNTCRKAFLFGTIVISDGNNMETTGMR
YSLISRDLVPKCIETMNGHHLADGMGTLSGCDKSVAAASMPILRNAPVVV
ILIDPAHIPSIVNKFMSKIKAELQKEAKINAVVSVINEFIYREKKAENNH
PQALAQAEEQAAPTPIEQLRKEVEELQKEVATMLFSKKNGVPNEGNKNPK
IDFKSSKNLIFCNGNALKLVDKKARKPTKGKEKAKKSGTKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000581DiOHA_6PGluconate_deHydtase
IPR037237IlvD/EDD_N