Gvermi7014.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7014.t1
Unique NameGvermi7014.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length466
Homology
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BLAST of Gvermi7014.t1 vs. uniprot
Match: A0A2V3J5T4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5T4_9FLOR)

HSP 1 Score: 520 bits (1339), Expect = 5.250e-180
Identity = 270/402 (67.16%), Postives = 332/402 (82.59%), Query Frame = 0 
Query:   33 SNAHLHHVDHTDQEIDAMTLDDLLHTERDLRQQNAAVDKHVVSLKGRIEKLRFKQERLEDQKQKVGEAKSWEARQKQAHIKELQRAKAEMEAKRQQIVILSEQAEKLRINIHEMQDKYKSLNRKRLELQDKYLHPSLRELVVTEAARGGAVPEHLINKTVDEIIPDIQSSLRGILNVENQLHHASPLAGVFTVFCIYALAVSLVFTCMRYIMIAQRIMTLRRMLFMADMSILFVWFLICVCYAAILIDPLEAMAREHGSMTMVVQILIMAGLVGNVILRCFALCSYADSKGFMELFFVVFVAQHYYQAVWVTIVLDEPVKASLWSYLGYASINASLAVYRARSFSRAMQTAQAEFCGTTAGKWESSWLKSRVENVIDYLEDLFTHGIPSEEADVEDLCEEQR 434
            +NAHLHHVDHTD+EID MT+++LLHTE DLR QNAAVD+HV SLKGRI KLR KQ  LE +K+KVGEA SWE+RQK++  KELQRAKAE+EAKRQQI++L E+AEK+R  I EMQD  KS+NRKRLE+QDKYLHPSLR++ V E  RGG + EHL+NKTV+ IIP+++  + GI +VE +LHH+SP+A VFT+FCIYALAVSLV TC+RY++IA RIMTLRRMLFMADM  L +WFLICVCYAAIL+DPLEAMAREHG++ MVVQ+LIMAGL+GNV+LRC ALC+   ++ F+EL  +V+VAQHYY+AVWV IV+DE VKA L SY+ YA IN SLA++RARS SRA+QTA  E  GTTAGKW+ SW K+++E  I Y+E+  T GIPS  AD+E + E  R
Sbjct:   28 TNAHLHHVDHTDEEIDGMTMEELLHTEHDLRDQNAAVDRHVTSLKGRILKLRHKQADLEGRKKKVGEAMSWESRQKESRKKELQRAKAELEAKRQQIIVLGEEAEKMRAGIREMQDNLKSMNRKRLEVQDKYLHPSLRDIFVNEGTRGGPLSEHLVNKTVESIIPELEIGMHGIEDVEYRLHHSSPIASVFTLFCIYALAVSLVVTCLRYLVIAHRIMTLRRMLFMADMCFLAMWFLICVCYAAILVDPLEAMAREHGALAMVVQVLIMAGLLGNVVLRCLALCASVSAQTFIELVAIVYVAQHYYEAVWVRIVMDEGVKARLLSYVTYAIINGSLAIHRARSVSRAIQTAHEELRGTTAGKWDQSWFKTQLEKGIQYIENALTIGIPSTAADIECVAEAPR 429
The following BLAST results are available for this feature:
BLAST of Gvermi7014.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5T4_9FLOR5.250e-18067.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..163
NoneNo IPR availableCOILSCoilCoilcoord: 73..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..465
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 316..326
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 353..371
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 348..352
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 244..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 219..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 372..465
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..315
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 280..290
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..347
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..279
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
NoneNo IPR availableTMHMMTMhelixcoord: 356..373
NoneNo IPR availableTMHMMTMhelixcoord: 327..346
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:951661..953153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7014.t1Gvermi7014.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 951661..953153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7014.t1 ID=Gvermi7014.t1|Name=Gvermi7014.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=466bp
MRLHTCISQCARRGSCFVLILLASFFFTLLVSSNAHLHHVDHTDQEIDAM
TLDDLLHTERDLRQQNAAVDKHVVSLKGRIEKLRFKQERLEDQKQKVGEA
KSWEARQKQAHIKELQRAKAEMEAKRQQIVILSEQAEKLRINIHEMQDKY
KSLNRKRLELQDKYLHPSLRELVVTEAARGGAVPEHLINKTVDEIIPDIQ
SSLRGILNVENQLHHASPLAGVFTVFCIYALAVSLVFTCMRYIMIAQRIM
TLRRMLFMADMSILFVWFLICVCYAAILIDPLEAMAREHGSMTMVVQILI
MAGLVGNVILRCFALCSYADSKGFMELFFVVFVAQHYYQAVWVTIVLDEP
VKASLWSYLGYASINASLAVYRARSFSRAMQTAQAEFCGTTAGKWESSWL
KSRVENVIDYLEDLFTHGIPSEEADVEDLCEEQRHSSRTRHGRQGRKELI
HVGVKSYSRPRDPRA*
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