Gvermi7094.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A1R3IK88_COCAP (Zinc finger, RING-type n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3IK88_COCAP) HSP 1 Score: 63.2 bits (152), Expect = 3.750e-9 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 105 PVVG-DTAGNGGGHVR-TQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLC 165
PV+ D++G+GGG T C ICL G+KVR L NCSH FHAKCI+ W+ + CPLC
Sbjct: 100 PVIAYDSSGSGGGLDNLTGTDCPICLGEFAQGDKVRILPNCSHGFHAKCIDIWLLSNSSCPLC 162
BLAST of Gvermi7094.t1 vs. uniprot
Match: UPI0009E2290C (RING-H2 finger protein ATL8-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2290C) HSP 1 Score: 62.8 bits (151), Expect = 4.030e-9 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 117 HVRTQN--KCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLCCTPVVA 171
H++ + +C +CL V GEKVR+L +C H FHA CI++W+C CP C +PV++
Sbjct: 62 HIKNEGIFECPVCLLSVEEGEKVRFLPDCGHGFHASCIDEWLCSRLTCPFCRSPVIS 118
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A843WEL5_COLES (RING-type E3 ubiquitin transferase n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843WEL5_COLES) HSP 1 Score: 60.1 bits (144), Expect = 4.910e-8 Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 0
Query: 108 GDTAGNGGGHVRTQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLCCTPVVA 171
GD A G +++C +CL GE VR L C HSFHA CI+ W+C CPLC V+A
Sbjct: 87 GDAAAAGEKGGSDESQCAVCLSAFAEGEDVRRLPKCGHSFHAACIDAWLCARASCPLCRASVLA 150
BLAST of Gvermi7094.t1 vs. uniprot
Match: UPI001920A64D (RING-H2 finger protein ATL39-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001920A64D) HSP 1 Score: 59.7 bits (143), Expect = 4.980e-8 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0
Query: 111 AGNGGGH-VRTQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLC 165
+GN G + + +C +CL + G++VR L C HSFHA CI+ W+CY CPLC
Sbjct: 86 SGNMGSEDMSGEYECVVCLSVFEDGDEVRQLPRCKHSFHAPCIDMWLCYHYDCPLC 141
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A1U7YUX1_NELNU (RING-type E3 ubiquitin transferase n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7YUX1_NELNU) HSP 1 Score: 61.2 bits (147), Expect = 5.280e-8 Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0
Query: 105 PVVGDTAGNGGGHVRTQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLCCTPVVA 171
PV+ ++ G + Q +C ICL + G+ VR+L NC H+FH +CI++W CPLC +P+ A
Sbjct: 84 PVLTYSSKQSGSFLPDQTECAICLVQLEEGDIVRWLPNCRHAFHLRCIDQWFASHANCPLCRSPIAA 150
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A2I0X6V8_9ASPA (RING-type E3 ubiquitin transferase n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X6V8_9ASPA) HSP 1 Score: 59.7 bits (143), Expect = 6.040e-8 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
Query: 124 CTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLCCTPV 169
C++CL GEKVR+L +C H +HA CI+KW+C CP C +PV
Sbjct: 76 CSVCLSSFEEGEKVRFLPDCGHGYHAVCIDKWLCTQLSCPFCRSPV 121
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A6A2X894_HIBSY (RING-type E3 ubiquitin transferase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X894_HIBSY) HSP 1 Score: 59.7 bits (143), Expect = 9.230e-8 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0
Query: 111 AGNGGGH-VRTQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLC 165
+GN G + + +C +CL + G++VR L C HSFHA CI+ W+CY CPLC
Sbjct: 86 SGNMGSEDMSGEYECVVCLSVFEDGDEVRQLPRCKHSFHAPCIDMWLCYHYDCPLC 141
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A059CYP0_EUCGR (RING-type domain-containing protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059CYP0_EUCGR) HSP 1 Score: 58.2 bits (139), Expect = 1.300e-7 Identity = 29/66 (43.94%), Postives = 36/66 (54.55%), Query Frame = 0
Query: 109 DTAGNGG--GHVRTQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLCCTPVVAH 172
D AG G G C +CL+ GEK R L +CSHSFHA+CI+ W+ CP+C T VV
Sbjct: 63 DYAGGIGDRGTSNGPGDCAVCLESFKVGEKCRSLPDCSHSFHAQCIDSWLLKTPICPICRTHVVVR 128
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A843THJ9_COLES (RING-type E3 ubiquitin transferase n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843THJ9_COLES) HSP 1 Score: 57.0 bits (136), Expect = 1.730e-7 Identity = 27/64 (42.19%), Postives = 34/64 (53.12%), Query Frame = 0
Query: 108 GDTAGNGGGHVRTQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANRCPLCCTPVVA 171
GD A G +++C +CL GE VR L C SFHA CI+ W+C CPLC V+A
Sbjct: 12 GDAAAAGEKGGSDESQCAVCLSAFAEGEDVRRLPKCGQSFHAACIDAWLCARASCPLCRASVLA 75
BLAST of Gvermi7094.t1 vs. uniprot
Match: A0A4S4D2X1_CAMSI (RING-type domain-containing protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4D2X1_CAMSI) HSP 1 Score: 57.8 bits (138), Expect = 2.390e-7 Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 0
Query: 98 MVVEEFCPVVGDTAGNGGGHVRTQNKCTICLDMVNCGEKVRYLKNCSHSFHAKCIEKWICYANR-CPLCCTPVVAH 172
+++ E PVV G + C +CL + GE++R+L NC H FH +C+++W+ + + CPLC TP V H
Sbjct: 65 LLIRELLPVVKLEDSAAGDPPES---CAVCLYELEVGEEIRWLANCKHIFHRRCLDRWMDHDQKTCPLCRTPFVPH 137 The following BLAST results are available for this feature:
BLAST of Gvermi7094.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi7094.t1 ID=Gvermi7094.t1|Name=Gvermi7094.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=173bpback to top |