Gvermi7068.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7068.t1
Unique NameGvermi7068.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length231
Homology
BLAST of Gvermi7068.t1 vs. uniprot
Match: A0A2V3INI8_9FLOR (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI8_9FLOR)

HSP 1 Score: 241 bits (614), Expect = 3.260e-77
Identity = 132/226 (58.41%), Postives = 164/226 (72.57%), Query Frame = 0
Query:    1 MSASILVIGASGRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCASVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTEAIAQCGRRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQCFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDGGKTTPALNVDRRDVAEWAVQQICGGAAHSQFGLAVNVTAA 226
            M+ASIL+IGA+GRMG+ LI  A+ Q   P +HAF+RNP +L  S++SLC SV +GDALC + V  AL AT ATHVVVAVGVP+S+  S+LRTDSA  +TEAI++  + V+VVV+SSIGA  +RIKF  G G    FML+HVL+DH  QE+ F  FF+ DK E LLIVRPT L DG GG K++LFDG + TP L VDRRDV+ W + QICG      FG AVN+T A
Sbjct:    1 MTASILIIGANGRMGQNLIHAATLQTKKPHIHAFVRNPLSLPPSVASLCYSVHKGDALCSDDVQAALTATSATHVVVAVGVPDSNVLSSLRTDSANTITEAISRSNQTVQVVVVSSIGAGGTRIKFSFGLGTLFHFMLQHVLTDHDHQEERFLRFFENDK-ERLLIVRPTQLTDGYGGDKVILFDGQQKTPTLKVDRRDVSVWILGQICGEG--DCFGRAVNITRA 223          
BLAST of Gvermi7068.t1 vs. uniprot
Match: A0A2V3J3X2_9FLOR (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X2_9FLOR)

HSP 1 Score: 226 bits (577), Expect = 1.290e-71
Identity = 123/226 (54.42%), Postives = 159/226 (70.35%), Query Frame = 0
Query:    1 MSASILVIGASGRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCASVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTEAIAQCGRRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQCFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDGGKTTPALNVDRRDVAEWAVQQICGGAAHSQFGLAVNVTAA 226
            M+ASIL+IGA+GRMG+ LI  A+ +   P +HAF+RNPA+L   ++S+C SV+RG+AL  E V  AL  + ATH++VA+GVPNS A STLR DSAK +TEAI +  + VKVVV+SS+GA  ++IKF  G G    F+LRHVL DH  QE+ F +FF+ DK + LLIVRPT L +GR G K+ LFDG K TP++ VDR DVA W   Q+C       FG AVN+T A
Sbjct:    1 MAASILIIGANGRMGQHLIYAAARETNKPTIHAFVRNPASLPPPVASVCDSVQRGNALEAEDVRAALVESSATHIIVAIGVPNSTARSTLRADSAKAITEAIERSEQPVKVVVVSSMGAGGTKIKFGFGIGSLTHFILRHVLDDHDHQEERFLSFFENDK-DKLLIVRPTELTEGRAGAKVTLFDGDKRTPSMKVDRGDVATWIAGQVCRDG--ECFGRAVNITRA 223          
BLAST of Gvermi7068.t1 vs. uniprot
Match: A0A2V3IUE0_9FLOR (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE0_9FLOR)

HSP 1 Score: 212 bits (539), Expect = 7.660e-66
Identity = 111/226 (49.12%), Postives = 156/226 (69.03%), Query Frame = 0
Query:    1 MSASILVIGASGRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCASVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTEAIAQCGRRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQCFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDGGKTTPALNVDRRDVAEWAVQQICGGAAHSQFGLAVNVTAA 226
            M+ SILVIGA+GR G++LI+ A+     P VHAF RNP +  + ++  C SV++GDAL  + VY AL AT+ATH+V+A+GVPNS APSTLR DSA+ + EA+ +  + VK V+IS++GA+D++I+F  G G  + ++LRH+L DH  QE  F  +++ D  + LLIVRPT L DG+ G K++LFDG   TP+L VDR D+A W V QI        FG A+N++ A
Sbjct:    1 MTTSILVIGATGRTGQQLIKAANEHPDHPQVHAFARNPQSFPSEIAEKCTSVQKGDALVADQVYDALVATKATHIVIAIGVPNSTAPSTLRGDSAEAIIEAMKRYPKPVKTVIISALGASDTKIQFGFGVGMVIYYILRHLLKDHDRQEASFLDYYN-DNEKGLLIVRPTGLVDGQEGSKVLLFDGQGRTPSLTVDRYDMAAWVVNQIANDG--DCFGKAINISKA 223          
BLAST of Gvermi7068.t1 vs. uniprot
Match: A0A7R9VGH1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VGH1_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.290e-38
Identity = 85/222 (38.29%), Postives = 125/222 (56.31%), Query Frame = 0
Query:    4 SILVIGASGRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCASVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTEAIAQCG-RRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQCFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDGGKTTPALNVDRRDVAEWAVQQICGGAAHSQFGLAVNVT 224
            S+L+IGASGR G  +++  S       VHA  R+P+ +       C SV +GDA   + + QA+  T A  V+V+VG  +S A S +RT SA+ L   + +   R V+ +V+SS GA  S+IK  +G GK +S+ LRHVL DHT QE+ F     G   +  +IVR TAL D +    +  F   + +P + +DR D+AEW V+++C G      G  VN+T
Sbjct:    8 SVLIIGASGRTGLEILRQLSQDTKKKEVHAMCRDPSKIPEQYKENCESVIKGDARSPDDIEQAINDTNAQVVIVSVGNGDSVAKSDVRTASARALARVMEKPQYRHVRALVVSSTGAGTSKIKVGMGVGKIISYHLRHVLKDHTGQEKAF-----GPVSDRTVIVRATALTDNKATGNVKEFGDKEKSPTIKIDRADLAEWVVKEVCAGGTVG--GKVVNIT 222          
BLAST of Gvermi7068.t1 vs. uniprot
Match: R7QF13_CHOCR (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF13_CHOCR)

HSP 1 Score: 140 bits (354), Expect = 6.270e-38
Identity = 89/225 (39.56%), Postives = 135/225 (60.00%), Query Frame = 0
Query:    2 SASILVIGASGRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCASVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTEAI--AQCGRRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQCFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDGGKTTPALNVDRRDVAEWAVQQICGGAAHSQFGLAVNVT 224
            S  +L+IGA+G +G++LI+ AS  + V  +HAF R P+ L AS +S CAS+ RGDA     V +AL +T+A+  ++ +G   S AP+ +R  +AK L + I   Q    VKV+V+SS GA  ++I    G G  ++++LRHV+ DHT QE+ F     GDK   +LIVRPT L DG+       F+     P +++DR D+A++ V +I  GA    +G  ++VT
Sbjct:    3 SQQVLLIGATGSLGRQLIRAASSSSGVT-LHAFCRTPSKLSASDASSCASIVRGDARSSSDVRRALVSTKASVAIMCIGEGTSTAPTDVREATAKALMDVIEPGQDLDHVKVMVVSSTGAGGTKIDIGFGIGMVVAYVLRHVMKDHTEQERVFKQRI-GDKSR-MLIVRPTGLTDGKATGHTTTFEKHSKPPTVHIDREDLAKFMVGEINRGA--KAYGKEISVT 222          
BLAST of Gvermi7068.t1 vs. uniprot
Match: A0A7S3L7U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7U3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.760e-21
Identity = 61/176 (34.66%), Postives = 96/176 (54.55%), Query Frame = 0
Query:   12 GRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCASVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTEAIAQCG-RRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQCFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDG 186
            G +G + ++  + +  +  +H   RNP+    +    C S+  GDA   + V  AL  ++A +VV+A G       +  R  +   L +A+++   + VK V+ISS GAA+++IK  +G G  +++ LRHVLSDHT QEQ F            LIVRPTAL   + G+K++ FDG
Sbjct:    1 GALGLQCLRHFADETSITYIHVLCRNPSKFSDTDKRACDSIIIGDARNTQDVETALAQSKADYVVLATGNGADLRKTDTREKTGIALAQAMSKPAFKHVKAVIISSHGAAETKIKVGVGIGMIIAYHLRHVLSDHTHQEQAFAKLMSRT-----LIVRPTALTHDKAGKKIVEFDG 171          
BLAST of Gvermi7068.t1 vs. uniprot
Match: A0A524KH02_9GAMM (SDR family oxidoreductase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A524KH02_9GAMM)

HSP 1 Score: 60.5 bits (145), Expect = 1.480e-7
Identity = 69/209 (33.01%), Postives = 99/209 (47.37%), Query Frame = 0
Query:    5 ILVIGASGRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCASVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTEAIAQCGRRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQCFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDGGKTT---PALNVDRRDVAEWAVQQICG 210
            I+V GA+G+ G ++++ A        V AF+RNP  L  S   L   V  GD L    V +   A     V+ A+GV +    + L   +A V+  A+ Q G R ++VV+SS+GA DS+ +  L      SF+L+HVL+D   QE    A        D  I+RP  L D  G R  ++   G  T       V R  VA  A+Q + G
Sbjct:    6 IMVFGATGKTGTQIVRQALEAGHN--VTAFVRNPTRLAISDPKL--RVVTGDVLDAASVERGF-AGGCDAVISALGVFHREPRTELSRGTANVI-RAMQQHGIR-RLVVVSSLGAGDSKGQGSLLARVLQSFLLKHVLADKDRQEAEIMA-----SGLDWTILRPPQLTDEPGIRDDLVAWSGPPTRQKKTWKVSRASVARAALQAVAG 202          
The following BLAST results are available for this feature:
BLAST of Gvermi7068.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3INI8_9FLOR3.260e-7758.41NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3J3X2_9FLOR1.290e-7154.42NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3IUE0_9FLOR7.660e-6649.12NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A7R9VGH1_9STRA2.290e-3838.29Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
R7QF13_CHOCR6.270e-3839.56NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
A0A7S3L7U3_9STRA2.760e-2134.66Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A524KH02_9GAMM1.480e-733.01SDR family oxidoreductase n=1 Tax=Chromatiales bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 9..208
e-value: 1.6E-20
score: 73.8
NoneNo IPR availableGENE3D3.40.50.720coord: 3..217
e-value: 1.3E-23
score: 85.6
NoneNo IPR availablePANTHERPTHR15020FLAVIN REDUCTASE-RELATEDcoord: 2..209
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 4..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1441067..1441759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7068.t1Gvermi7068.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1441067..1441759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7068.t1 ID=Gvermi7068.t1|Name=Gvermi7068.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=231bp
MSASILVIGASGRMGKRLIQCASHQNPVPAVHAFLRNPAALDASLSSLCA
SVRRGDALCVEHVYQALEATRATHVVVAVGVPNSHAPSTLRTDSAKVLTE
AIAQCGRRVKVVVISSIGAADSRIKFKLGFGKALSFMLRHVLSDHTAQEQ
CFNAFFDGDKREDLLIVRPTALQDGRGGRKLMLFDGGKTTPALNVDRRDV
AEWAVQQICGGAAHSQFGLAVNVTAAPAAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf