Gvermi6979.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6979.t1
Unique NameGvermi6979.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length452
Homology
BLAST of Gvermi6979.t1 vs. uniprot
Match: A0A2V3J7S9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7S9_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 8.970e-79
Identity = 165/437 (37.76%), Postives = 229/437 (52.40%), Query Frame = 0
Query:    9 SAFCVGLFIQAALSTPVCNTQLQLSQVLQDSYQANANLVRLGVASQVVGVFYNDALRYVARECNCSSTLLDEPCVDTKFNANSEVAALRNLADSDEGVATASR-------------LFRLYDSQKSLRALSGDEQDRLDLGLELLDTHTKSLQIINSPAWQPAQFPSDEAFFQDDSSAREAACASFNAVTHPNNITFPATAVTAYVLSLVQVVRVANPSAGNGNEVPANVVAANAILHNHTSFVFEGVRCKKQSGDALHIPITYMEDY-KTQVELLLAASPNKATVSLNNVLSIIASAKKYLPTLVQKLSSLQSYGDSDSILYTDAKSQVLVERKSVNEIMANDVGLVTNAYQFLVLTTGIGGDLGSIGKDGESGVCAPGWIHVSRAVSLMSADEECCSDMCTLLALSLSDPFLWGIEQENCCQHCNLYVCANQDLL 431
            +AF V L  +     P C + + L+  L  S+  NA+L+R GV S+VV  +Y+ A+  VAR CNCSS  +DE CV   F  + E++ L+   D+D  ++   R             LF LYD  K+L  LS  + + L+  L  L + +KS+  I S  WQ ++FPSDE FFQD   +++AAC  +   +  +N TFPA A TAYV+ LVQ VR A             V AA  IL  H SFVF G RC + +G  LHIP+  ME+Y  T  +LL  A      + LN++  +  S+  + P LV KLSSL S GD  ++L TD  +   +ER  VN ++  D  L                 LG I     +  C   WI VSR + L + DE+CC + C   ALSLSDPFL+ + QE CC+ CN ++C +  LL
Sbjct:    5 TAFFVILVTRTFARAPKCTSTIGLNAFLSTSFLVNADLIRFGVPSEVVTKYYDRAVMDVARFCNCSSVSVDETCVQLIFEESLELSLLKGALDADSLLSKGQRDQVSPTAPENKVKLFPLYDPGKTLSGLSSTQTEELNSHLTRLLSASKSVVSIQSEYWQRSRFPSDETFFQDTYESQKAACGEYQVASKMDNRTFPAWAATAYVIGLVQEVRKAQ----------GEVSAAIDILAAHASFVFNGARCYRVNGLKLHIPVRKMEEYLATAQKLLNEAGQRSHPIPLNDIRKVSESSATFFPRLVTKLSSLSSNGDGRTVLVTDGTT---IERALVNTLLMGDPLL-----------------LGEITLGPAAYECPERWIRVSRVLPLANMDEQCCPEKCEYAALSLSDPFLYTVTQEKCCELCNYFICKDHTLL 411          
BLAST of Gvermi6979.t1 vs. uniprot
Match: A0A2V3J4E3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4E3_9FLOR)

HSP 1 Score: 258 bits (659), Expect = 9.000e-79
Identity = 156/384 (40.62%), Postives = 227/384 (59.11%), Query Frame = 0
Query:    9 SAFCVGLFIQAALST-PVCNTQLQLSQVLQDSYQANANLVRLGVASQVVGVFYNDALRYVARECNCSSTLLDEPCVDTKFNANSEVAALRNLADSDEGVATASRLFRLYDSQKSLRALSGDEQDRLDLGLELLDTHTKSLQIINSPAWQPAQFPSDEAFFQDDSSAREAACASFNAVTHPNNITFPATAVTAYVLSLVQVVRVANPSAGNGNEVPANVVAANAILHNHTSFVFEGVRCKKQSGDALHIPITYMEDYKTQVELLLAASPNKATVSLNNVLSIIASAKKYLPTLVQKLSSLQSYGDSDSILYTDAKSQVLVERKSVNEIMANDVGLVTNAYQFLVLTTGIGGDLGSIGKDGESGVCAPGWIHVSRAVSLMSADEEC 391
            S F   L +  A  T P CN  + LS  L DSYQANANL+R G  S++V   Y+ +L  +A  C CS+T +D+ CV T FN ++EV+ LR+  D+D       +LFRLYDS K L +L+ ++   L+     L + T     I SPAWQ + FPSD+ FFQDD+S ++ AC +FNAVTHP  +T+PA++ TAYV+ LVQ VR A            ++     IL NHT+FV+ GVRC K SGD LHIP+TY+EDYK  +E +L+++     + L NV  ++ ++K +LP+LV KLS+L SYGDS ++L  +A    +V   S    +  D+  +T A    +L T + G + SIG  G++ + +PG +     +    + E+C
Sbjct:    8 STFIATLLVALAFGTAPSCNNVISLSTFLNDSYQANANLIRFGAPSEIVRALYDHSLIEMASSCECSTTTVDQFCVHTIFNLDNEVSVLRSTIDTDATTVGTDKLFRLYDSSKVLDSLAANQIASLEFCRTHLLSLTPDTTTIKSPAWQRSIFPSDDVFFQDDASGQKDACNTFNAVTHPQGLTYPASSATAYVIGLVQSVRKAK----------LDMAVPLQILANHTTFVYNGVRCNKLSGDRLHIPVTYLEDYKKTIESILSSASTDTGI-LRNVRELLQNSKMFLPSLVDKLSALISYGDSATVLVANA----IVGNPST---VTRDLVELTLAADPSLLVTSMPG-MSSIGM-GQTQMNSPGGVDQCALLDGFLSREQC 371          
The following BLAST results are available for this feature:
BLAST of Gvermi6979.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J7S9_9FLOR8.970e-7937.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4E3_9FLOR9.000e-7940.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 448..451
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..451
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:802579..803934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6979.t1Gvermi6979.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 802579..803934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6979.t1 ID=Gvermi6979.t1|Name=Gvermi6979.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=452bp
MMKRKVCFSAFCVGLFIQAALSTPVCNTQLQLSQVLQDSYQANANLVRLG
VASQVVGVFYNDALRYVARECNCSSTLLDEPCVDTKFNANSEVAALRNLA
DSDEGVATASRLFRLYDSQKSLRALSGDEQDRLDLGLELLDTHTKSLQII
NSPAWQPAQFPSDEAFFQDDSSAREAACASFNAVTHPNNITFPATAVTAY
VLSLVQVVRVANPSAGNGNEVPANVVAANAILHNHTSFVFEGVRCKKQSG
DALHIPITYMEDYKTQVELLLAASPNKATVSLNNVLSIIASAKKYLPTLV
QKLSSLQSYGDSDSILYTDAKSQVLVERKSVNEIMANDVGLVTNAYQFLV
LTTGIGGDLGSIGKDGESGVCAPGWIHVSRAVSLMSADEECCSDMCTLLA
LSLSDPFLWGIEQENCCQHCNLYVCANQDLLSSSIPLHMAPPTVYPTAVD
L*
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