Gvermi7101.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7101.t1
Unique NameGvermi7101.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length156
Homology
BLAST of Gvermi7101.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 158 bits (399), Expect = 7.170e-42
Identity = 85/204 (41.67%), Postives = 109/204 (53.43%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI-------------------------------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEPTT 155
            ML+A+V+EP  S WASP VL  K DG+ +F VDYRRLNA+TVRD+YP+PR+                                                 PF L NAPATFQR +DI LS   W+ CLVYLDDIIVFS    +H+ H+   +  L   G+TL LKKC FF +TV+YL  +IRPG+L + +    +  +   PTT
Sbjct:    1 MLQAKVIEPTTSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTT 204          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A815W6V8_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815W6V8_9BILA)

HSP 1 Score: 142 bits (357), Expect = 6.570e-39
Identity = 74/178 (41.57%), Postives = 99/178 (55.62%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEPT 154
            ML+A  + P+ SPWASP VL+ K DGT +F VDYR+LNA T+R  YP+P++                        PF L+NAPATFQR +D+IL+  KW+ CLVY+DDIIVFS     HL  +      L+  G+ LK  KC+F    + YL  II P  +  +   + S  L  +PT
Sbjct:    1 MLQASHITPSHSPWASPIVLSPKKDGTLRFCVDYRKLNANTIRTAYPMPQVDDTLDSLREAAFITHRGLYEFLVMPFGLSNAPATFQRLMDLILAEIKWQSCLVYIDDIIVFSSTFEQHLKDLSSVFDRLKTAGLILKASKCDFCRKELKYLGHIITPDGIKPDPGLIDSVKLFPQPT 178          
BLAST of Gvermi7101.t1 vs. uniprot
Match: R7QRD9_CHOCR (Retrotransposon protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRD9_CHOCR)

HSP 1 Score: 137 bits (346), Expect = 5.410e-37
Identity = 70/176 (39.77%), Postives = 97/176 (55.11%), Query Frame = 0
Query:   29 KFLVDYRRLNAVTVRDTYPIP-------------------------------------------------RIPFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEPTT 155
            +F VDYRRLNA+TV+D+YP+P                                                 R+PF L NAPATFQR +DI+LS ++W+ CLVY DDII+FS+ + +H THV+  + VL+D G++LKL+KC FF ++V+YL  +IRPG L + E    +   A E TT
Sbjct:    5 RFCVDYRRLNAITVKDSYPLPKMEDCLDSLGDAKCFTTLDCNSGYWQIPVAEADREKTTFTCHEGCYQFRRMPFGLCNAPATFQRTLDILLSGYRWKSCLVYFDDIIIFSNFIEEHSTHVQQVLKVLQDAGLSLKLEKCNFFAESVDYLGHVIRPGLLAVAEKNTDAIKKAQERTT 180          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A818ZV99_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818ZV99_9BILA)

HSP 1 Score: 139 bits (351), Expect = 6.100e-37
Identity = 76/204 (37.25%), Postives = 103/204 (50.49%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI-------------------------------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEPTT 155
            ML   V+ P++SPWASP VLA+K DG+ +F +DYR+LN VT+RD YPIPRI                                                 PF LTNAPATFQR +DI+L+  KW+ CLVYLDDIIV+S     H+  +R+  T L +  +TLK  KC F    + +L  +I P  +  +   + +     +PTT
Sbjct:    1 MLAQGVITPSKSPWASPVVLALKKDGSIRFCIDYRKLNDVTIRDAYPIPRIDDTLDALQHAQFVSTLDLRSGYWQVEMDDNSRPITAFVTHKGLFECNVMPFGLTNAPATFQRLMDIVLAGLKWQCCLVYLDDIIVYSPTFEQHIHDLRNVFTALAEANLTLKASKCHFCRREMKFLGHLITPDGIKPDPGLISTITQFNQPTT 204          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A815FWQ8_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815FWQ8_9BILA)

HSP 1 Score: 143 bits (361), Expect = 8.440e-37
Identity = 75/178 (42.13%), Postives = 100/178 (56.18%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEPT 154
            ML+A  + P+ SPWASP VL+ K DGT +F VDYR+LNA T+R  YP+P++                        PF L+NAPATFQR +D+IL+  KW+ CLVY+DDI+VFS     HL  +      L+  G+TLK  KC+F    + YL  II P  +  E   + S  L  +PT
Sbjct:  167 MLQAGHITPSHSPWASPIVLSPKKDGTLRFCVDYRKLNANTIRTAYPMPQVDDTLDSLREAAFITHRGLYEFLVMPFGLSNAPATFQRLMDLILAGIKWQSCLVYIDDIVVFSSTFEQHLKDLSSVFDRLKTAGLTLKASKCDFCRKELKYLGHIITPDGIKPEPGLIDSVKLFPQPT 344          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A821UHW3_9BILA (Hypothetical protein n=7 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821UHW3_9BILA)

HSP 1 Score: 142 bits (358), Expect = 1.970e-36
Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEPT 154
            ML+A  + P+ SPWASP VL+ K DGT +F VDYR+LNA T+R  YP+P++                        PF L+NAPATFQR +D+IL+  KW+ CLVY+DDI+VFS     HL  +      L+  G+TLK  KC+F    + YL  II P  +  +   + S  L  +PT
Sbjct:  167 MLQAGHITPSHSPWASPIVLSPKKDGTLRFCVDYRKLNANTIRTAYPMPQVDDTLDSLREAAFITHRGLYEFLVMPFGLSNAPATFQRLMDLILAGIKWQSCLVYIDDIVVFSSTFEQHLKDLSSVFDRLKTAGLTLKASKCDFCRKELKYLGHIITPDGIKPDPGLIDSVKLFPQPT 344          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A816GA58_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A816GA58_9BILA)

HSP 1 Score: 140 bits (353), Expect = 2.990e-36
Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEPT 154
            ML+A    P+ SPWASP VL+ K DGT +F VDYR+LNA T+R  YP+P++                        PF L+NAPA FQR +D+IL+  KW+ CLVY+DDI+VFS     HL  +      L+  G+TLK  KC+F    + YL  II P  + ++   + S  L  +PT
Sbjct:  165 MLQAGHTIPSHSPWASPIVLSPKKDGTLRFCVDYRKLNANTIRTAYPMPQVDDTLDSLREAAFITHRGLYEFLVMPFGLSNAPAIFQRLMDLILAGIKWQSCLVYIDDIVVFSSTFEQHLKDLSSVFDRLKTAGLTLKASKCDFCRKELKYLGHIITPDGIKLDPGLIDSVTLFPQPT 342          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A815T2D8_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A815T2D8_ADIRI)

HSP 1 Score: 142 bits (357), Expect = 3.290e-36
Identity = 71/181 (39.23%), Postives = 97/181 (53.59%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI-------------------------------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRII 132
            ML+ +++ P+ SPWASP VLA K DG+ +F +DYR+LNAVTVRD YPIPR+                                                 P+ LTNAPATFQR +DI+L+  KW+ CLVY+DD+I++S N N H+  + +    LR+  +TLK  KC F  + + YL  II
Sbjct:  356 MLKEKIITPSNSPWASPVVLAPKKDGSLRFCIDYRKLNAVTVRDAYPIPRVDDTLDALDEAKFISTLDLRSGYWQVEMDPESQAMTAFISHKGLYEFKVMPYGLTNAPATFQRLMDIVLAGLKWKSCLVYIDDVIIYSSNFNQHINDLTEVFDALRNANLTLKASKCHFCRNEIKYLGHII 536          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A819TKC7_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A819TKC7_9BILA)

HSP 1 Score: 136 bits (342), Expect = 4.590e-36
Identity = 75/202 (37.13%), Postives = 99/202 (49.01%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI-------------------------------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEP 153
            ML   ++EP++SPWASP V A K DG+ +F VDYR+LN+VT RD YPIPRI                                                 PF LTNAPATFQR +DI+L+  KW+ CLVY+DDIIV+S N   HL  +      LR+  +TLK  KC F    + YL  ++    +  + T  K+     +P
Sbjct:    1 MLEEGIIEPSKSPWASPVVSAPKKDGSMRFCVDYRKLNSVTTRDAYPIPRIDDTLDSLQEAKFISTLDLRSGYWQVEMDKDSKEKTAFITHRGLYEFNVMPFGLTNAPATFQRLMDIVLAGLKWQCCLVYIDDIIVYSPNFEQHLLDLEKVFLALREANLTLKASKCCFCRKEMKYLGHVVTQNGIKPDPTLTKAVTYFPQP 202          
BLAST of Gvermi7101.t1 vs. uniprot
Match: A0A816MFI3_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816MFI3_9BILA)

HSP 1 Score: 138 bits (348), Expect = 2.720e-35
Identity = 76/202 (37.62%), Postives = 100/202 (49.50%), Query Frame = 0
Query:    1 MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPRI-------------------------------------------------PFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVRDDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALAMEP 153
            ML   ++EP++SPWASP VLA K DG+ +F VDYR+LN+VT RD YPIPRI                                                 PF LTNAPATFQR +DI+L+  KW+ CLVY+DDIIV+S N   HL  +      LR+  +TLK  KC F    + YL  ++    +  + T  K+     +P
Sbjct:  287 MLEEGIIEPSKSPWASPVVLAPKKDGSMRFCVDYRKLNSVTTRDAYPIPRIDDTLDSLQEAKFISTLDLRSGYWQVEMDKDSKEKTAFITHRGLYEFNVMPFGLTNAPATFQRLMDIVLAGLKWQCCLVYIDDIIVYSPNFEQHLLDLEKVFLALREANLTLKASKCCFCRKEMKYLGHVVTQNGIKPDPTLTKAVTYFPQP 488          
The following BLAST results are available for this feature:
BLAST of Gvermi7101.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1E14077.170e-4241.67uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
A0A815W6V8_9BILA6.570e-3941.57Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
R7QRD9_CHOCR5.410e-3739.77Retrotransposon protein n=1 Tax=Chondrus crispus T... [more]
A0A818ZV99_9BILA6.100e-3737.25Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A815FWQ8_9BILA8.440e-3742.13Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 ... [more]
A0A821UHW3_9BILA1.970e-3641.57Hypothetical protein n=7 Tax=Rotaria sp. Silwood1 ... [more]
A0A816GA58_9BILA2.990e-3641.01Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 ... [more]
A0A815T2D8_ADIRI3.290e-3639.23Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
A0A819TKC7_9BILA4.590e-3637.13Hypothetical protein n=1 Tax=Rotaria magnacalcarat... [more]
A0A816MFI3_9BILA2.720e-3537.62Hypothetical protein n=6 Tax=Rotaria magnacalcarat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..45
e-value: 4.7E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 1..131
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 1..131
NoneNo IPR availableCDDcd01647RT_LTRcoord: 6..132
e-value: 1.47929E-45
score: 145.046
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 58..129
e-value: 6.0E-23
score: 83.2
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 50..128
e-value: 6.4E-14
score: 52.0
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1664238..1664850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7101.t1Gvermi7101.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1664238..1664850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7101.t1 ID=Gvermi7101.t1|Name=Gvermi7101.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=156bp
MLRAEVLEPAQSPWASPAVLAIKADGTWKFLVDYRRLNAVTVRDTYPIPR
IPFDLTNAPATFQRAIDIILSRFKWRKCLVYLDDIIVFSDNLNDHLTHVR
DDMTVLRDVGITLKLKKCEFFTDTVNYLWRIIRPGRLMIEETRVKSFALA
MEPTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf